RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 ARXQ96QS3 562 aa19.15■□□□□ 0.66
NEK9-209ENST00000556170 ADGRL2O95490 1459 aa19.15■□□□□ 0.66
NEK9-209ENST00000556170 GGNBP2Q9H3C7 697 aa19.14■□□□□ 0.65
NEK9-209ENST00000556170 MTHFSP49914 203 aa19.14■□□□□ 0.65
NEK9-209ENST00000556170 PER1O15534 1290 aaPredicted RBP19.14■□□□□ 0.65
NEK9-209ENST00000556170 PAK3O75914 559 aaPredicted RBP19.14■□□□□ 0.65
NEK9-209ENST00000556170 BCAR3O75815 825 aa19.12■□□□□ 0.65
NEK9-209ENST00000556170 PLCH2O75038 1416 aa19.12■□□□□ 0.65
NEK9-209ENST00000556170 STAC3Q96MF2 364 aa19.11■□□□□ 0.65
NEK9-209ENST00000556170 ABCC10Q5T3U5 1492 aa19.11■□□□□ 0.65
NEK9-209ENST00000556170 CGNL1Q0VF96 1302 aa19.11■□□□□ 0.65
NEK9-209ENST00000556170 DDRGK1Q96HY6 314 aa19.1■□□□□ 0.65
NEK9-209ENST00000556170 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.1■□□□□ 0.65
NEK9-209ENST00000556170 MBD5Q9P267 1494 aa19.1■□□□□ 0.65
NEK9-209ENST00000556170 EVC2Q86UK5 1308 aa19.1■□□□□ 0.65
NEK9-209ENST00000556170 FAM69CQ0P6D2 419 aa19.1■□□□□ 0.65
NEK9-209ENST00000556170 HDGFL2Q7Z4V5 671 aaPredicted RBP19.1■□□□□ 0.65
NEK9-209ENST00000556170 KDM5BQ9UGL1 1544 aa19.1■□□□□ 0.65
NEK9-209ENST00000556170 E9PSI1 815 aa19.09■□□□□ 0.65
NEK9-209ENST00000556170 PANK1Q8TE04 598 aa19.09■□□□□ 0.65
NEK9-209ENST00000556170 C14orf37Q86TY3 774 aa19.08■□□□□ 0.65
NEK9-209ENST00000556170 TCP11L2Q8N4U5 519 aa19.08■□□□□ 0.64
NEK9-209ENST00000556170 ADGRL1O94910 1474 aa19.07■□□□□ 0.64
NEK9-209ENST00000556170 TERF2IPQ9NYB0 399 aa19.07■□□□□ 0.64
NEK9-209ENST00000556170 ZBTB7CA1YPR0 619 aa19.07■□□□□ 0.64
NEK9-209ENST00000556170 FANCAO15360 1455 aa19.07■□□□□ 0.64
NEK9-209ENST00000556170 SHANK2Q9UPX8 1470 aa19.06■□□□□ 0.64
NEK9-209ENST00000556170 ELL2O00472 640 aaPredicted RBP19.06■□□□□ 0.64
NEK9-209ENST00000556170 ANO8Q9HCE9 1232 aaPredicted RBP19.06■□□□□ 0.64
NEK9-209ENST00000556170 SMC4Q9NTJ3 1288 aa19.06■□□□□ 0.64
NEK9-209ENST00000556170 A2MP01023 1474 aa19.04■□□□□ 0.64
NEK9-209ENST00000556170 UHRF1BP1Q6BDS2 1440 aa19.04■□□□□ 0.64
NEK9-209ENST00000556170 AMER1Q5JTC6 1135 aaPredicted RBP19.04■□□□□ 0.64
NEK9-209ENST00000556170 SPRYD3Q8NCJ5 442 aa19.04■□□□□ 0.64
NEK9-209ENST00000556170 ITPRIPQ8IWB1 547 aa19.03■□□□□ 0.64
NEK9-209ENST00000556170 CENPQQ7L2Z9 268 aaPredicted RBP19.03■□□□□ 0.64
NEK9-209ENST00000556170 MYH16Q9H6N6 1097 aa19.03■□□□□ 0.64
NEK9-209ENST00000556170 ABCA8O94911 1581 aa19.03■□□□□ 0.64
NEK9-209ENST00000556170 HSP90AA1P07900 732 aaKnown RBP19.02■□□□□ 0.63
NEK9-209ENST00000556170 PARD3Q8TEW0 1356 aa19.02■□□□□ 0.63
NEK9-209ENST00000556170 PRAM1Q96QH2 718 aa19.01■□□□□ 0.63
NEK9-209ENST00000556170 RUNDC1Q96C34 613 aa19.01■□□□□ 0.63
NEK9-209ENST00000556170 CD109Q6YHK3 1445 aa19■□□□□ 0.63
NEK9-209ENST00000556170 IDI1Q13907 227 aa18.98■□□□□ 0.63
NEK9-209ENST00000556170 FBXO31Q5XUX0 539 aaPredicted RBP18.98■□□□□ 0.63
NEK9-209ENST00000556170 DUOX2Q9NRD8 1548 aa18.98■□□□□ 0.63
NEK9-209ENST00000556170 ARHGEF12Q9NZN5 1544 aa18.97■□□□□ 0.63
NEK9-209ENST00000556170 DUSP27Q5VZP5 1158 aa18.97■□□□□ 0.63
NEK9-209ENST00000556170 SLFN5Q08AF3 891 aa18.97■□□□□ 0.63
NEK9-209ENST00000556170 TSR2Q969E8 191 aaKnown RBP18.97■□□□□ 0.63
NEK9-209ENST00000556170 SLKQ9H2G2 1235 aaPredicted RBP18.97■□□□□ 0.63
NEK9-209ENST00000556170 NOS1P29475 1434 aa18.96■□□□□ 0.63
NEK9-209ENST00000556170 ERCC6L2Q5T890 1561 aa18.96■□□□□ 0.63
NEK9-209ENST00000556170 HMOX1P09601 288 aa18.96■□□□□ 0.63
NEK9-209ENST00000556170 ABCC2Q92887 1545 aa18.96■□□□□ 0.63
NEK9-209ENST00000556170 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.95■□□□□ 0.62
NEK9-209ENST00000556170 CARD14Q9BXL6 1004 aa18.95■□□□□ 0.62
NEK9-209ENST00000556170 SCAF11Q99590 1463 aaKnown RBP18.95■□□□□ 0.62
NEK9-209ENST00000556170 NSD3Q9BZ95 1437 aa18.95■□□□□ 0.62
NEK9-209ENST00000556170 RIPK4P57078 832 aa18.94■□□□□ 0.62
NEK9-209ENST00000556170 BECN1Q14457 450 aa18.94■□□□□ 0.62
NEK9-209ENST00000556170 ASXL2Q76L83 1435 aa18.94■□□□□ 0.62
NEK9-209ENST00000556170 MS4A1P11836 297 aa18.94■□□□□ 0.62
NEK9-209ENST00000556170 FAM161AQ3B820 660 aa18.94■□□□□ 0.62
NEK9-209ENST00000556170 SAMD9LQ8IVG5 1584 aa18.94■□□□□ 0.62
NEK9-209ENST00000556170 WWC1Q8IX03 1113 aa18.93■□□□□ 0.62
NEK9-209ENST00000556170 BACH2Q9BYV9 841 aa18.93■□□□□ 0.62
NEK9-209ENST00000556170 CABP1Q9NZU7 370 aa18.93■□□□□ 0.62
NEK9-209ENST00000556170 RWDD1Q9H446 243 aaPredicted RBP18.93■□□□□ 0.62
NEK9-209ENST00000556170 PLA2R1Q13018 1463 aa18.93■□□□□ 0.62
NEK9-209ENST00000556170 APBB1O00213 710 aa18.92■□□□□ 0.62
NEK9-209ENST00000556170 LRPPRCP42704 1394 aaKnown RBP18.92■□□□□ 0.62
NEK9-209ENST00000556170 DIAPH1O60610 1272 aaKnown RBP18.91■□□□□ 0.62
NEK9-209ENST00000556170 PNNQ9H307 717 aaKnown RBP18.91■□□□□ 0.62
NEK9-209ENST00000556170 SPINK5Q9NQ38 1064 aaPredicted RBP18.91■□□□□ 0.62
NEK9-209ENST00000556170 FBLN1P23142 703 aa18.91■□□□□ 0.62
NEK9-209ENST00000556170 ADGBQ8N7X0 1667 aa18.91■□□□□ 0.62
NEK9-209ENST00000556170 GLIPR1L2Q4G1C9 344 aa18.9■□□□□ 0.62
NEK9-209ENST00000556170 PLEKHH1Q9ULM0 1364 aa18.9■□□□□ 0.62
NEK9-209ENST00000556170 TTC37Q6PGP7 1564 aa18.89■□□□□ 0.61
NEK9-209ENST00000556170 WAPLQ7Z5K2 1190 aa18.89■□□□□ 0.61
NEK9-209ENST00000556170 ZKSCAN2Q63HK3 967 aa18.89■□□□□ 0.61
NEK9-209ENST00000556170 PMFBP1Q8TBY8 1022 aa18.89■□□□□ 0.61
NEK9-209ENST00000556170 LMOD2Q6P5Q4 547 aa18.88■□□□□ 0.61
NEK9-209ENST00000556170 C14orf93Q9H972 538 aaKnown RBP18.88■□□□□ 0.61
NEK9-209ENST00000556170 CDC42BPAQ5VT25 1732 aa18.88■□□□□ 0.61
NEK9-209ENST00000556170 WDR7Q9Y4E6 1490 aa18.88■□□□□ 0.61
NEK9-209ENST00000556170 KDM5CP41229 1560 aa18.87■□□□□ 0.61
NEK9-209ENST00000556170 COL17A1Q9UMD9 1497 aaPredicted RBP18.87■□□□□ 0.61
NEK9-209ENST00000556170 EXOSC9Q06265 439 aaKnown RBP18.87■□□□□ 0.61
NEK9-209ENST00000556170 TXNDC2Q86VQ3 553 aa18.87■□□□□ 0.61
NEK9-209ENST00000556170 BCORL1Q5H9F3 1711 aa18.87■□□□□ 0.61
NEK9-209ENST00000556170 TRHP20396 242 aaPredicted RBP18.87■□□□□ 0.61
NEK9-209ENST00000556170 CDK19Q9BWU1 502 aa18.87■□□□□ 0.61
NEK9-209ENST00000556170 HDGFP51858 240 aaKnown RBP18.87■□□□□ 0.61
NEK9-209ENST00000556170 MFAP1P55081 439 aaKnown RBP18.87■□□□□ 0.61
NEK9-209ENST00000556170 IPO8O15397 1037 aaKnown RBP18.86■□□□□ 0.61
NEK9-209ENST00000556170 SLC52A1Q9NWF4 448 aa18.86■□□□□ 0.61
NEK9-209ENST00000556170 GPRASP1Q5JY77 1395 aa18.85■□□□□ 0.61
NEK9-209ENST00000556170 DMRT2Q9Y5R5 561 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms