RNA–Protein interactions for RNA: ENST00000556119.5

ABCD4-224, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-224ENST00000556119 NUTM2EB1AL46 878 aaPredicted RBP21.31■■□□□ 1
ABCD4-224ENST00000556119 NUTM2AQ8IVF1 878 aaPredicted RBP21.31■■□□□ 1
ABCD4-224ENST00000556119 BCANQ96GW7 911 aa21.31■■□□□ 1
ABCD4-224ENST00000556119 RGS12O14924 1447 aa21.3■■□□□ 1
ABCD4-224ENST00000556119 DIP2AQ14689 1571 aa21.3■■□□□ 1
ABCD4-224ENST00000556119 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.29■■□□□ 1
ABCD4-224ENST00000556119 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.29■■□□□ 13e-10■■□□□ 13
ABCD4-224ENST00000556119 NCOA3Q9Y6Q9 1424 aa21.27■■□□□ 1
ABCD4-224ENST00000556119 ADGRB3O60242 1522 aa21.26■□□□□ 0.99
ABCD4-224ENST00000556119 RBM6P78332 1123 aaKnown RBP21.25■□□□□ 0.99
ABCD4-224ENST00000556119 QTRT2Q9H974 415 aaKnown RBP21.25■□□□□ 0.99
ABCD4-224ENST00000556119 EP400Q96L91 3159 aa21.25■□□□□ 0.99
ABCD4-224ENST00000556119 NUTM2DQ5VT03 806 aaPredicted RBP21.24■□□□□ 0.99
ABCD4-224ENST00000556119 CADPS2Q86UW7 1296 aa21.24■□□□□ 0.99
ABCD4-224ENST00000556119 MYO5BQ9ULV0 1848 aa21.24■□□□□ 0.99
ABCD4-224ENST00000556119 C14orf37Q86TY3 774 aa21.23■□□□□ 0.99
ABCD4-224ENST00000556119 C19orf44Q9H6X5 657 aa21.23■□□□□ 0.99
ABCD4-224ENST00000556119 KIF15Q9NS87 1388 aa21.23■□□□□ 0.99
ABCD4-224ENST00000556119 NOS1P29475 1434 aa21.22■□□□□ 0.99
ABCD4-224ENST00000556119 ERBINQ96RT1 1412 aa21.22■□□□□ 0.99
ABCD4-224ENST00000556119 ATF3P18847 181 aa21.22■□□□□ 0.99
ABCD4-224ENST00000556119 PLEKHG1Q9ULL1 1385 aa21.22■□□□□ 0.99
ABCD4-224ENST00000556119 BRINP3Q76B58 766 aa21.21■□□□□ 0.99
ABCD4-224ENST00000556119 RRP7BPQ9NSQ0 103 aa21.21■□□□□ 0.99
ABCD4-224ENST00000556119 ZRANB1Q9UGI0 708 aa21.21■□□□□ 0.99
ABCD4-224ENST00000556119 SETBP1Q9Y6X0 1596 aa21.21■□□□□ 0.99
ABCD4-224ENST00000556119 ZFYVE9O95405 1425 aa21.21■□□□□ 0.99
ABCD4-224ENST00000556119 LMTK2Q8IWU2 1503 aa21.2■□□□□ 0.98
ABCD4-224ENST00000556119 TBX22Q9Y458 520 aa21.2■□□□□ 0.98
ABCD4-224ENST00000556119 KANK1Q14678 1352 aa21.2■□□□□ 0.98
ABCD4-224ENST00000556119 C8orf37Q96NL8 207 aa21.18■□□□□ 0.98
ABCD4-224ENST00000556119 SLC52A1Q9NWF4 448 aa21.18■□□□□ 0.98
ABCD4-224ENST00000556119 MYOM3Q5VTT5 1437 aa21.18■□□□□ 0.98
ABCD4-224ENST00000556119 SETD5Q9C0A6 1442 aa21.17■□□□□ 0.98
ABCD4-224ENST00000556119 ATAD2Q6PL18 1390 aa21.15■□□□□ 0.98
ABCD4-224ENST00000556119 RIMS2Q9UQ26 1411 aa21.14■□□□□ 0.98
ABCD4-224ENST00000556119 CROCC2H7BZ55 1655 aa21.14■□□□□ 0.97
ABCD4-224ENST00000556119 NHSL1Q5SYE7 1610 aa21.14■□□□□ 0.97
ABCD4-224ENST00000556119 PPP1R15AO75807 674 aaPredicted RBP21.13■□□□□ 0.97
ABCD4-224ENST00000556119 GCC2Q8IWJ2 1684 aa21.12■□□□□ 0.97
ABCD4-224ENST00000556119 FOXD1Q16676 465 aa21.12■□□□□ 0.97
ABCD4-224ENST00000556119 LRRC59Q96AG4 307 aaKnown RBP21.12■□□□□ 0.97
ABCD4-224ENST00000556119 NGLY1Q96IV0 654 aa21.12■□□□□ 0.97
ABCD4-224ENST00000556119 ASXL1Q8IXJ9 1541 aa21.12■□□□□ 0.97
ABCD4-224ENST00000556119 ABCC5O15440 1437 aa21.12■□□□□ 0.97
ABCD4-224ENST00000556119 ADAMTS13Q76LX8 1427 aa21.12■□□□□ 0.97
ABCD4-224ENST00000556119 HDGFP51858 240 aaKnown RBP21.11■□□□□ 0.97
ABCD4-224ENST00000556119 TMEM131LA2VDJ0 1609 aa21.1■□□□□ 0.97
ABCD4-224ENST00000556119 PNPLA6Q8IY17 1366 aa21.08■□□□□ 0.96
ABCD4-224ENST00000556119 PIK3R4Q99570 1358 aa21.08■□□□□ 0.96
ABCD4-224ENST00000556119 KANK4Q5T7N3 995 aaPredicted RBP21.06■□□□□ 0.96
ABCD4-224ENST00000556119 DDX17Q92841 729 aaKnown RBP21.06■□□□□ 0.96
ABCD4-224ENST00000556119 AMOTL2Q9Y2J4 779 aa21.06■□□□□ 0.96
ABCD4-224ENST00000556119 DCCP43146 1447 aa21.05■□□□□ 0.96
ABCD4-224ENST00000556119 ADAMTS2O95450 1211 aa21.05■□□□□ 0.96
ABCD4-224ENST00000556119 MST1RQ04912 1400 aa21.04■□□□□ 0.96
ABCD4-224ENST00000556119 PTPRUQ92729 1446 aa21.04■□□□□ 0.96
ABCD4-224ENST00000556119 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.03■□□□□ 0.96
ABCD4-224ENST00000556119 CCDC125Q86Z20 511 aa21.02■□□□□ 0.96
ABCD4-224ENST00000556119 RPRD2Q5VT52 1461 aaKnown RBP21.01■□□□□ 0.95
ABCD4-224ENST00000556119 USP21Q9UK80 565 aa21.01■□□□□ 0.95
ABCD4-224ENST00000556119 DAPK1P53355 1430 aa21.01■□□□□ 0.95
ABCD4-224ENST00000556119 TRPC5Q9UL62 973 aaPredicted RBP21■□□□□ 0.95
ABCD4-224ENST00000556119 TRPM2O94759 1503 aa20.99■□□□□ 0.95
ABCD4-224ENST00000556119 CHIC2Q9UKJ5 165 aa20.99■□□□□ 0.95
ABCD4-224ENST00000556119 PTPN23Q9H3S7 1636 aa20.97■□□□□ 0.95
ABCD4-224ENST00000556119 CHGAP10645 457 aaKnown RBP20.97■□□□□ 0.95
ABCD4-224ENST00000556119 FNBP4Q8N3X1 1017 aaPredicted RBP20.97■□□□□ 0.95
ABCD4-224ENST00000556119 ANKRD30AQ9BXX3 1397 aa20.97■□□□□ 0.95
ABCD4-224ENST00000556119 ATRNO75882 1429 aa20.95■□□□□ 0.95
ABCD4-224ENST00000556119 XRN1Q8IZH2 1706 aaKnown RBP20.95■□□□□ 0.94
ABCD4-224ENST00000556119 UNC13BO14795 1591 aa20.94■□□□□ 0.94
ABCD4-224ENST00000556119 LRP5O75197 1615 aa20.91■□□□□ 0.94
ABCD4-224ENST00000556119 LAMC1P11047 1609 aa20.91■□□□□ 0.94
ABCD4-224ENST00000556119 PTCH1Q13635 1447 aa20.9■□□□□ 0.94
ABCD4-224ENST00000556119 NRXN3Q9Y4C0 1643 aa20.89■□□□□ 0.94
ABCD4-224ENST00000556119 VPS8Q8N3P4 1428 aa20.89■□□□□ 0.94
ABCD4-224ENST00000556119 SOS2Q07890 1332 aaPredicted RBP20.88■□□□□ 0.93
ABCD4-224ENST00000556119 NALCNQ8IZF0 1738 aa20.88■□□□□ 0.93
ABCD4-224ENST00000556119 ADGRL3Q9HAR2 1447 aa20.87■□□□□ 0.93
ABCD4-224ENST00000556119 BCL9LQ86UU0 1499 aa20.87■□□□□ 0.93
ABCD4-224ENST00000556119 DEFB132Q7Z7B7 95 aa20.85■□□□□ 0.93
ABCD4-224ENST00000556119 E9PCH4 1651 aa20.85■□□□□ 0.93
ABCD4-224ENST00000556119 BLMP54132 1417 aaPredicted RBP20.85■□□□□ 0.93
ABCD4-224ENST00000556119 C1orf167Q5SNV9 1468 aa20.84■□□□□ 0.93
ABCD4-224ENST00000556119 COL22A1Q8NFW1 1626 aaPredicted RBP20.84■□□□□ 0.93
ABCD4-224ENST00000556119 METP08581 1390 aa20.84■□□□□ 0.93
ABCD4-224ENST00000556119 GJD4Q96KN9 370 aaPredicted RBP20.83■□□□□ 0.93
ABCD4-224ENST00000556119 MARF1Q9Y4F3 1742 aaKnown RBP20.83■□□□□ 0.92
ABCD4-224ENST00000556119 ADGRL2O95490 1459 aa20.82■□□□□ 0.92
ABCD4-224ENST00000556119 ORAI2Q96SN7 254 aa20.82■□□□□ 0.92
ABCD4-224ENST00000556119 BRWD3Q6RI45 1802 aa20.82■□□□□ 0.92
ABCD4-224ENST00000556119 ANKRD50Q9ULJ7 1429 aa20.81■□□□□ 0.92
ABCD4-224ENST00000556119 MYOM2P54296 1465 aa20.78■□□□□ 0.92
ABCD4-224ENST00000556119 GLI3P10071 1580 aa20.76■□□□□ 0.91
ABCD4-224ENST00000556119 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.75■□□□□ 0.91
ABCD4-224ENST00000556119 PSDA5PKW4 1024 aaPredicted RBP20.74■□□□□ 0.91
ABCD4-224ENST00000556119 HRCP23327 699 aa20.74■□□□□ 0.91
ABCD4-224ENST00000556119 IQGAP3Q86VI3 1631 aa20.74■□□□□ 0.91
ABCD4-224ENST00000556119 SPHKAPQ2M3C7 1700 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms