RNA–Protein interactions for RNA: ENST00000556054.5

APEX1-212, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-212ENST00000556054 CHGAP10645 457 aaKnown RBP17.21■□□□□ 0.35
APEX1-212ENST00000556054 HDGFP51858 240 aaKnown RBP17.21■□□□□ 0.35
APEX1-212ENST00000556054 DCAF11Q8TEB1 546 aa17.21■□□□□ 0.35
APEX1-212ENST00000556054 STAG3Q9UJ98 1225 aa17.21■□□□□ 0.35
APEX1-212ENST00000556054 THEMISQ8N1K5 641 aaPredicted RBP17.2■□□□□ 0.34
APEX1-212ENST00000556054 NRXN1Q9ULB1 1477 aa17.19■□□□□ 0.34
APEX1-212ENST00000556054 VGFO15240 615 aaPredicted RBP17.19■□□□□ 0.34
APEX1-212ENST00000556054 ZNF326Q5BKZ1 582 aaKnown RBP17.19■□□□□ 0.34
APEX1-212ENST00000556054 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.19■□□□□ 0.34
APEX1-212ENST00000556054 SLIT1O75093 1534 aa17.19■□□□□ 0.34
APEX1-212ENST00000556054 ARHGAP23Q9P227 1491 aa17.18■□□□□ 0.34
APEX1-212ENST00000556054 TMEM2Q9UHN6 1383 aa17.17■□□□□ 0.34
APEX1-212ENST00000556054 PRAG1Q86YV5 1406 aa17.17■□□□□ 0.34
APEX1-212ENST00000556054 KIAA1210Q9ULL0 1709 aa17.16■□□□□ 0.34
APEX1-212ENST00000556054 RIMS2Q9UQ26 1411 aa17.16■□□□□ 0.34
APEX1-212ENST00000556054 PLPPR3Q6T4P5 718 aa17.16■□□□□ 0.34
APEX1-212ENST00000556054 KDM2AQ9Y2K7 1162 aa17.14■□□□□ 0.33
APEX1-212ENST00000556054 NBPF8Q3BBV2 869 aa17.13■□□□□ 0.33
APEX1-212ENST00000556054 PIK3C2GO75747 1445 aa17.12■□□□□ 0.33
APEX1-212ENST00000556054 RALGAPBQ86X10 1494 aa17.12■□□□□ 0.33
APEX1-212ENST00000556054 LAMC1P11047 1609 aa17.11■□□□□ 0.33
APEX1-212ENST00000556054 TRPM1Q7Z4N2 1603 aa17.11■□□□□ 0.33
APEX1-212ENST00000556054 ADGRF5Q8IZF2 1346 aa17.11■□□□□ 0.33
APEX1-212ENST00000556054 EID1Q9Y6B2 187 aa17.1■□□□□ 0.33
APEX1-212ENST00000556054 GPRASP1Q5JY77 1395 aa17.09■□□□□ 0.33
APEX1-212ENST00000556054 SETBP1Q9Y6X0 1596 aa17.08■□□□□ 0.32
APEX1-212ENST00000556054 PLEKHG1Q9ULL1 1385 aa17.08■□□□□ 0.32
APEX1-212ENST00000556054 C14orf93Q9H972 538 aaKnown RBP17.08■□□□□ 0.32
APEX1-212ENST00000556054 SCAF11Q99590 1463 aaKnown RBP17.07■□□□□ 0.32
APEX1-212ENST00000556054 TXNDC2Q86VQ3 553 aa17.07■□□□□ 0.32
APEX1-212ENST00000556054 ANKLE2Q86XL3 938 aa17.06■□□□□ 0.32
APEX1-212ENST00000556054 LMTK3Q96Q04 1460 aa17.05■□□□□ 0.32
APEX1-212ENST00000556054 LTKP29376 864 aa17.05■□□□□ 0.32
APEX1-212ENST00000556054 MED14O60244 1454 aa17.05■□□□□ 0.32
APEX1-212ENST00000556054 POLR1AO95602 1720 aaPredicted RBP17.04■□□□□ 0.32
APEX1-212ENST00000556054 NRXN3Q9Y4C0 1643 aa17.03■□□□□ 0.32
APEX1-212ENST00000556054 ALKQ9UM73 1620 aa17.03■□□□□ 0.32
APEX1-212ENST00000556054 DIP2AQ14689 1571 aa17.02■□□□□ 0.32
APEX1-212ENST00000556054 SETD1AO15047 1707 aaKnown RBP17.02■□□□□ 0.32
APEX1-212ENST00000556054 CFAP70Q5T0N1 1121 aa17.02■□□□□ 0.32
APEX1-212ENST00000556054 ROCK2O75116 1388 aaKnown RBP17.02■□□□□ 0.31
APEX1-212ENST00000556054 NUTM2DQ5VT03 806 aaPredicted RBP17.01■□□□□ 0.31
APEX1-212ENST00000556054 ADGRB1O14514 1584 aa17.01■□□□□ 0.31
APEX1-212ENST00000556054 TBX22Q9Y458 520 aa17■□□□□ 0.31
APEX1-212ENST00000556054 IQGAP1P46940 1657 aa17■□□□□ 0.31
APEX1-212ENST00000556054 ADAMTS13Q76LX8 1427 aa16.99■□□□□ 0.31
APEX1-212ENST00000556054 NBPF1Q3BBV0 1214 aa16.99■□□□□ 0.31
APEX1-212ENST00000556054 CARD11Q9BXL7 1154 aa16.98■□□□□ 0.31
APEX1-212ENST00000556054 PIK3R4Q99570 1358 aa16.98■□□□□ 0.31
APEX1-212ENST00000556054 NPHP4O75161 1426 aaPredicted RBP16.96■□□□□ 0.31
APEX1-212ENST00000556054 EIF4G2P78344 907 aaKnown RBP eCLIP16.96■□□□□ 0.31
APEX1-212ENST00000556054 ASXL1Q8IXJ9 1541 aa16.95■□□□□ 0.3
APEX1-212ENST00000556054 STRCQ7RTU9 1775 aa16.94■□□□□ 0.3
APEX1-212ENST00000556054 LRPPRCP42704 1394 aaKnown RBP16.93■□□□□ 0.3
APEX1-212ENST00000556054 ABCC11Q96J66 1382 aa16.93■□□□□ 0.3
APEX1-212ENST00000556054 USP47Q96K76 1375 aa16.93■□□□□ 0.3
APEX1-212ENST00000556054 SIRT1Q96EB6 747 aa16.93■□□□□ 0.3
APEX1-212ENST00000556054 YTHDC2Q9H6S0 1430 aaKnown RBP16.93■□□□□ 0.3
APEX1-212ENST00000556054 EIF3AQ14152 1382 aaKnown RBP16.92■□□□□ 0.3
APEX1-212ENST00000556054 DLC1Q96QB1 1528 aa16.92■□□□□ 0.3
APEX1-212ENST00000556054 SLC24A1O60721 1099 aa16.92■□□□□ 0.3
APEX1-212ENST00000556054 BCANQ96GW7 911 aa16.92■□□□□ 0.3
APEX1-212ENST00000556054 TECPR2O15040 1411 aa16.92■□□□□ 0.3
APEX1-212ENST00000556054 KNDC1Q76NI1 1749 aa16.92■□□□□ 0.3
APEX1-212ENST00000556054 NCKAP5LQ9HCH0 1330 aa16.92■□□□□ 0.3
APEX1-212ENST00000556054 HSPA2P54652 639 aa16.91■□□□□ 0.3
APEX1-212ENST00000556054 METP08581 1390 aa16.9■□□□□ 0.3
APEX1-212ENST00000556054 TMEM132EQ6IEE7 984 aa16.9■□□□□ 0.3
APEX1-212ENST00000556054 CHD2O14647 1828 aaKnown RBP16.9■□□□□ 0.3
APEX1-212ENST00000556054 HSPA5P11021 654 aaKnown RBP16.89■□□□□ 0.29
APEX1-212ENST00000556054 SLC26A8Q96RN1 970 aa16.89■□□□□ 0.29
APEX1-212ENST00000556054 ARHGEF28Q8N1W1 1705 aaKnown RBP16.88■□□□□ 0.29
APEX1-212ENST00000556054 DMRT2Q9Y5R5 561 aa16.88■□□□□ 0.29
APEX1-212ENST00000556054 SBNO2Q9Y2G9 1366 aa16.88■□□□□ 0.29
APEX1-212ENST00000556054 FAM135BQ49AJ0 1406 aa16.87■□□□□ 0.29
APEX1-212ENST00000556054 CPS1P31327 1500 aa16.87■□□□□ 0.29
APEX1-212ENST00000556054 XRN1Q8IZH2 1706 aaKnown RBP16.87■□□□□ 0.29
APEX1-212ENST00000556054 ST20-MTHFSA0A0A6YYL1 179 aa16.85■□□□□ 0.29
APEX1-212ENST00000556054 ZNF316A6NFI3 1004 aaPredicted RBP16.85■□□□□ 0.29
APEX1-212ENST00000556054 PTCH1Q13635 1447 aa16.85■□□□□ 0.29
APEX1-212ENST00000556054 PTPRUQ92729 1446 aa16.85■□□□□ 0.29
APEX1-212ENST00000556054 TRAK1Q9UPV9 953 aa16.84■□□□□ 0.29
APEX1-212ENST00000556054 NWD1Q149M9 1564 aa16.84■□□□□ 0.29
APEX1-212ENST00000556054 KCNA6P17658 529 aa16.83■□□□□ 0.28
APEX1-212ENST00000556054 TESK2Q96S53 571 aa16.83■□□□□ 0.28
APEX1-212ENST00000556054 CENPJQ9HC77 1338 aaPredicted RBP16.83■□□□□ 0.28
APEX1-212ENST00000556054 AMOTL2Q9Y2J4 779 aa16.83■□□□□ 0.28
APEX1-212ENST00000556054 SENP3Q9H4L4 574 aaPredicted RBP16.81■□□□□ 0.28
APEX1-212ENST00000556054 STK26Q9P289 416 aa16.81■□□□□ 0.28
APEX1-212ENST00000556054 QRICH2Q9H0J4 1663 aa16.81■□□□□ 0.28
APEX1-212ENST00000556054 PUS7Q96PZ0 661 aaKnown RBP16.79■□□□□ 0.28
APEX1-212ENST00000556054 NKTRP30414 1462 aaKnown RBP16.79■□□□□ 0.28
APEX1-212ENST00000556054 ROBO2Q9HCK4 1378 aa16.78■□□□□ 0.28
APEX1-212ENST00000556054 PRAM1Q96QH2 718 aa16.78■□□□□ 0.28
APEX1-212ENST00000556054 POGKQ9P215 609 aa16.78■□□□□ 0.28
APEX1-212ENST00000556054 TMF1P82094 1093 aa16.77■□□□□ 0.28
APEX1-212ENST00000556054 CDCA8Q53HL2 280 aa16.77■□□□□ 0.28
APEX1-212ENST00000556054 NCOA3Q9Y6Q9 1424 aa16.76■□□□□ 0.27
APEX1-212ENST00000556054 HIRIP3Q9BW71 556 aaPredicted RBP16.75■□□□□ 0.27
APEX1-212ENST00000556054 ADGRB2O60241 1585 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms