RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 KDM5DQ9BY66 1539 aa22■■□□□ 1.11
PPP4R3A-208ENST00000555462 CARD14Q9BXL6 1004 aa22■■□□□ 1.11
PPP4R3A-208ENST00000555462 RLBP1P12271 317 aa21.99■■□□□ 1.11
PPP4R3A-208ENST00000555462 BLMP54132 1417 aaPredicted RBP21.99■■□□□ 1.11
PPP4R3A-208ENST00000555462 TMEM132EQ6IEE7 984 aa21.98■■□□□ 1.11
PPP4R3A-208ENST00000555462 ITSN2Q9NZM3 1697 aa21.98■■□□□ 1.11
PPP4R3A-208ENST00000555462 ARHGEF12Q9NZN5 1544 aa21.98■■□□□ 1.11
PPP4R3A-208ENST00000555462 EIF4G3O43432 1585 aaKnown RBP21.97■■□□□ 1.11
PPP4R3A-208ENST00000555462 ABCC10Q5T3U5 1492 aa21.97■■□□□ 1.11
PPP4R3A-208ENST00000555462 CENPJQ9HC77 1338 aaPredicted RBP21.97■■□□□ 1.11
PPP4R3A-208ENST00000555462 SLC12A5Q9H2X9 1139 aa21.97■■□□□ 1.11
PPP4R3A-208ENST00000555462 CDC42BPAQ5VT25 1732 aa21.97■■□□□ 1.11
PPP4R3A-208ENST00000555462 SYCP2Q9BX26 1530 aa21.96■■□□□ 1.11
PPP4R3A-208ENST00000555462 KIF3BO15066 747 aa21.96■■□□□ 1.11
PPP4R3A-208ENST00000555462 ARHGAP5Q13017 1502 aa21.96■■□□□ 1.11
PPP4R3A-208ENST00000555462 PCDHB15Q9Y5E8 787 aa21.95■■□□□ 1.1
PPP4R3A-208ENST00000555462 CCDC141Q6ZP82 1450 aa21.94■■□□□ 1.1
PPP4R3A-208ENST00000555462 ZNF521Q96K83 1311 aa21.92■■□□□ 1.1
PPP4R3A-208ENST00000555462 MORC1Q86VD1 984 aa21.92■■□□□ 1.1
PPP4R3A-208ENST00000555462 WWC1Q8IX03 1113 aa21.92■■□□□ 1.1
PPP4R3A-208ENST00000555462 ZMYM4Q5VZL5 1548 aa21.92■■□□□ 1.1
PPP4R3A-208ENST00000555462 TSR2Q969E8 191 aaKnown RBP21.91■■□□□ 1.1
PPP4R3A-208ENST00000555462 ADGRF5Q8IZF2 1346 aa21.91■■□□□ 1.1
PPP4R3A-208ENST00000555462 MFAP1P55081 439 aaKnown RBP21.91■■□□□ 1.1
PPP4R3A-208ENST00000555462 USP19O94966 1318 aa21.91■■□□□ 1.1
PPP4R3A-208ENST00000555462 TCP11L2Q8N4U5 519 aa21.9■■□□□ 1.1
PPP4R3A-208ENST00000555462 E9PSI1 815 aa21.89■■□□□ 1.1
PPP4R3A-208ENST00000555462 SYNJ2O15056 1496 aa21.89■■□□□ 1.1
PPP4R3A-208ENST00000555462 CROCC2H7BZ55 1655 aa21.89■■□□□ 1.09
PPP4R3A-208ENST00000555462 FOXD4L1Q9NU39 408 aa21.89■■□□□ 1.09
PPP4R3A-208ENST00000555462 WDR7Q9Y4E6 1490 aa21.89■■□□□ 1.09
PPP4R3A-208ENST00000555462 TRPM1Q7Z4N2 1603 aa21.88■■□□□ 1.09
PPP4R3A-208ENST00000555462 PDZRN3Q9UPQ7 1066 aa21.88■■□□□ 1.09
PPP4R3A-208ENST00000555462 U2SURPO15042 1029 aaKnown RBP21.87■■□□□ 1.09
PPP4R3A-208ENST00000555462 GPRASP1Q5JY77 1395 aa21.86■■□□□ 1.09
PPP4R3A-208ENST00000555462 U2AF1L5P0DN76 240 aaPredicted RBP21.86■■□□□ 1.09
PPP4R3A-208ENST00000555462 U2AF1Q01081 240 aaKnown RBP eCLIP21.86■■□□□ 1.09
PPP4R3A-208ENST00000555462 SPAG9O60271 1321 aaKnown RBP21.86■■□□□ 1.09
PPP4R3A-208ENST00000555462 SAMD9LQ8IVG5 1584 aa21.85■■□□□ 1.09
PPP4R3A-208ENST00000555462 MTHFSP49914 203 aa21.85■■□□□ 1.09
PPP4R3A-208ENST00000555462 E9PCH4 1651 aa21.85■■□□□ 1.09
PPP4R3A-208ENST00000555462 CDCA8Q53HL2 280 aa21.85■■□□□ 1.09
PPP4R3A-208ENST00000555462 ADCY10Q96PN6 1610 aa21.83■■□□□ 1.08
PPP4R3A-208ENST00000555462 PANK2Q9BZ23 570 aa21.82■■□□□ 1.08
PPP4R3A-208ENST00000555462 RSPH4AQ5TD94 716 aa21.82■■□□□ 1.08
PPP4R3A-208ENST00000555462 EFCAB2Q5VUJ9 269 aa21.82■■□□□ 1.08
PPP4R3A-208ENST00000555462 STK26Q9P289 416 aa21.82■■□□□ 1.08
PPP4R3A-208ENST00000555462 NKTRP30414 1462 aaKnown RBP21.81■■□□□ 1.08
PPP4R3A-208ENST00000555462 FTSJ3Q8IY81 847 aaKnown RBP21.81■■□□□ 1.08
PPP4R3A-208ENST00000555462 TBC1D2Q9BYX2 928 aa21.81■■□□□ 1.08
PPP4R3A-208ENST00000555462 FBLN1P23142 703 aa21.81■■□□□ 1.08
PPP4R3A-208ENST00000555462 RARSP54136 660 aaKnown RBP21.81■■□□□ 1.08
PPP4R3A-208ENST00000555462 BECN1Q14457 450 aa21.8■■□□□ 1.08
PPP4R3A-208ENST00000555462 UPF2Q9HAU5 1272 aaKnown RBP21.8■■□□□ 1.08
PPP4R3A-208ENST00000555462 SHANK2Q9UPX8 1470 aa21.8■■□□□ 1.08
PPP4R3A-208ENST00000555462 GGT6Q6P531 493 aa21.8■■□□□ 1.08
PPP4R3A-208ENST00000555462 TRAPPC8Q9Y2L5 1435 aa21.79■■□□□ 1.08
PPP4R3A-208ENST00000555462 ABCA8O94911 1581 aa21.79■■□□□ 1.08
PPP4R3A-208ENST00000555462 TRMT2AQ8IZ69 625 aaKnown RBP21.78■■□□□ 1.08
PPP4R3A-208ENST00000555462 ITPRIPQ8IWB1 547 aa21.78■■□□□ 1.08
PPP4R3A-208ENST00000555462 CGNL1Q0VF96 1302 aa21.77■■□□□ 1.08
PPP4R3A-208ENST00000555462 RRAGDQ9NQL2 400 aaPredicted RBP21.76■■□□□ 1.07
PPP4R3A-208ENST00000555462 PRDM15P57071 1507 aaPredicted RBP21.76■■□□□ 1.07
PPP4R3A-208ENST00000555462 ELL2O00472 640 aaPredicted RBP21.75■■□□□ 1.07
PPP4R3A-208ENST00000555462 CABP2Q9NPB3 220 aa21.74■■□□□ 1.07
PPP4R3A-208ENST00000555462 SMC4Q9NTJ3 1288 aa21.74■■□□□ 1.07
PPP4R3A-208ENST00000555462 GGNBP2Q9H3C7 697 aa21.72■■□□□ 1.07
PPP4R3A-208ENST00000555462 UGGT1Q9NYU2 1555 aa21.72■■□□□ 1.07
PPP4R3A-208ENST00000555462 NUP160Q12769 1436 aa21.72■■□□□ 1.07
PPP4R3A-208ENST00000555462 TTC37Q6PGP7 1564 aa21.72■■□□□ 1.07
PPP4R3A-208ENST00000555462 CDC42BPBQ9Y5S2 1711 aa21.72■■□□□ 1.07
PPP4R3A-208ENST00000555462 PDE3AQ14432 1141 aa21.72■■□□□ 1.07
PPP4R3A-208ENST00000555462 ASXL1Q8IXJ9 1541 aa21.71■■□□□ 1.07
PPP4R3A-208ENST00000555462 EXOSC9Q06265 439 aaKnown RBP21.71■■□□□ 1.07
PPP4R3A-208ENST00000555462 C1orf115Q9H7X2 142 aa21.7■■□□□ 1.07
PPP4R3A-208ENST00000555462 LNPKQ9C0E8 428 aa21.7■■□□□ 1.06
PPP4R3A-208ENST00000555462 EIF3AQ14152 1382 aaKnown RBP21.7■■□□□ 1.06
PPP4R3A-208ENST00000555462 NSD3Q9BZ95 1437 aa21.7■■□□□ 1.06
PPP4R3A-208ENST00000555462 CFAP65Q6ZU64 1925 aaKnown RBP21.7■■□□□ 1.06
PPP4R3A-208ENST00000555462 RUNDC1Q96C34 613 aa21.7■■□□□ 1.06
PPP4R3A-208ENST00000555462 MAPK8IP3Q9UPT6 1336 aa21.68■■□□□ 1.06
PPP4R3A-208ENST00000555462 NAP1L5Q96NT1 182 aaPredicted RBP21.68■■□□□ 1.06
PPP4R3A-208ENST00000555462 SCAF11Q99590 1463 aaKnown RBP21.68■■□□□ 1.06
PPP4R3A-208ENST00000555462 RWDD1Q9H446 243 aaPredicted RBP21.67■■□□□ 1.06
PPP4R3A-208ENST00000555462 MYO5CQ9NQX4 1742 aa21.66■■□□□ 1.06
PPP4R3A-208ENST00000555462 PMFBP1Q8TBY8 1022 aa21.66■■□□□ 1.06
PPP4R3A-208ENST00000555462 C22orf23Q9BZE7 217 aa21.66■■□□□ 1.06
PPP4R3A-208ENST00000555462 SCAPERQ9BY12 1400 aa21.66■■□□□ 1.06
PPP4R3A-208ENST00000555462 TBC1D32Q96NH3 1257 aa21.65■■□□□ 1.06
PPP4R3A-208ENST00000555462 ERCC6L2Q5T890 1561 aa21.65■■□□□ 1.06
PPP4R3A-208ENST00000555462 XRCC6P12956 609 aaKnown RBP eCLIP21.65■■□□□ 1.06
PPP4R3A-208ENST00000555462 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.65■■□□□ 1.062e-10■■■■□ 21.1
PPP4R3A-208ENST00000555462 THUMPD2Q9BTF0 503 aaKnown RBP21.65■■□□□ 1.06
PPP4R3A-208ENST00000555462 DZIP1LQ8IYY4 767 aaKnown RBP21.64■■□□□ 1.05
PPP4R3A-208ENST00000555462 INSRP06213 1382 aa21.64■■□□□ 1.05
PPP4R3A-208ENST00000555462 SSH1Q8WYL5 1049 aa21.63■■□□□ 1.05
PPP4R3A-208ENST00000555462 ANTXR1Q9H6X2 564 aa21.63■■□□□ 1.05
PPP4R3A-208ENST00000555462 NOB1Q9ULX3 412 aaKnown RBP21.63■■□□□ 1.05
PPP4R3A-208ENST00000555462 SRPK2P78362 688 aaKnown RBP21.62■■□□□ 1.05
PPP4R3A-208ENST00000555462 HSP90AA1P07900 732 aaKnown RBP21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms