RNA–Protein interactions for RNA: ENST00000554913.5

XRCC3-209, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene XRCC3, Length 2,539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-209ENST00000554913 DDRGK1Q96HY6 314 aa21.73■■□□□ 1.07
XRCC3-209ENST00000554913 CENPQQ7L2Z9 268 aaPredicted RBP21.72■■□□□ 1.07
XRCC3-209ENST00000554913 SLC4A3P48751 1232 aa21.7■■□□□ 1.06
XRCC3-209ENST00000554913 CCDC146Q8IYE0 955 aa21.69■■□□□ 1.06
XRCC3-209ENST00000554913 MADDQ8WXG6 1647 aa21.68■■□□□ 1.06
XRCC3-209ENST00000554913 SLFN5Q08AF3 891 aa21.68■■□□□ 1.06
XRCC3-209ENST00000554913 IL27Q8NEV9 243 aa21.68■■□□□ 1.06
XRCC3-209ENST00000554913 IQGAP1P46940 1657 aa21.67■■□□□ 1.06
XRCC3-209ENST00000554913 CDCA8Q53HL2 280 aa21.66■■□□□ 1.06
XRCC3-209ENST00000554913 SPINK5Q9NQ38 1064 aaPredicted RBP21.66■■□□□ 1.06
XRCC3-209ENST00000554913 C8orf34Q49A92 452 aa21.65■■□□□ 1.06
XRCC3-209ENST00000554913 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.65■■□□□ 1.06
XRCC3-209ENST00000554913 SCAF11Q99590 1463 aaKnown RBP21.65■■□□□ 1.06
XRCC3-209ENST00000554913 ASXL1Q8IXJ9 1541 aa21.65■■□□□ 1.06
XRCC3-209ENST00000554913 TRAPPC8Q9Y2L5 1435 aa21.65■■□□□ 1.06
XRCC3-209ENST00000554913 FAM161AQ3B820 660 aa21.64■■□□□ 1.06
XRCC3-209ENST00000554913 EFCAB2Q5VUJ9 269 aa21.64■■□□□ 1.06
XRCC3-209ENST00000554913 OSCARQ8IYS5 282 aa21.64■■□□□ 1.06
XRCC3-209ENST00000554913 PLCH2O75038 1416 aa21.64■■□□□ 1.05
XRCC3-209ENST00000554913 SYNMO15061 1565 aa21.64■■□□□ 1.05
XRCC3-209ENST00000554913 PIK3C2GO75747 1445 aa21.63■■□□□ 1.05
XRCC3-209ENST00000554913 APAF1O14727 1248 aa21.63■■□□□ 1.05
XRCC3-209ENST00000554913 TRMT2AQ8IZ69 625 aaKnown RBP21.63■■□□□ 1.05
XRCC3-209ENST00000554913 RGS3P49796 1198 aa21.62■■□□□ 1.05
XRCC3-209ENST00000554913 BCAR3O75815 825 aa21.6■■□□□ 1.05
XRCC3-209ENST00000554913 NFKBIBQ15653 356 aa21.6■■□□□ 1.05
XRCC3-209ENST00000554913 SCAPERQ9BY12 1400 aa21.6■■□□□ 1.05
XRCC3-209ENST00000554913 AFAP1Q8N556 730 aa21.59■■□□□ 1.05
XRCC3-209ENST00000554913 DAXXQ9UER7 740 aaPredicted RBP21.59■■□□□ 1.05
XRCC3-209ENST00000554913 TRPM2O94759 1503 aa21.58■■□□□ 1.05
XRCC3-209ENST00000554913 SPAG9O60271 1321 aaKnown RBP21.58■■□□□ 1.04
XRCC3-209ENST00000554913 SPHKAPQ2M3C7 1700 aa21.58■■□□□ 1.04
XRCC3-209ENST00000554913 NPC1L1Q9UHC9 1359 aa21.58■■□□□ 1.04
XRCC3-209ENST00000554913 MYOM1P52179 1685 aa21.57■■□□□ 1.04
XRCC3-209ENST00000554913 DMRT2Q9Y5R5 561 aa21.57■■□□□ 1.04
XRCC3-209ENST00000554913 ABCC1P33527 1531 aa21.57■■□□□ 1.04
XRCC3-209ENST00000554913 RTN4Q9NQC3 1192 aaKnown RBP21.57■■□□□ 1.04
XRCC3-209ENST00000554913 PTPRTO14522 1441 aa21.56■■□□□ 1.04
XRCC3-209ENST00000554913 CLTCL1P53675 1640 aa21.56■■□□□ 1.04
XRCC3-209ENST00000554913 NKTRP30414 1462 aaKnown RBP21.55■■□□□ 1.04
XRCC3-209ENST00000554913 STAC3Q96MF2 364 aa21.55■■□□□ 1.04
XRCC3-209ENST00000554913 CEP152O94986 1710 aa21.54■■□□□ 1.04
XRCC3-209ENST00000554913 EIF3AQ14152 1382 aaKnown RBP21.53■■□□□ 1.04
XRCC3-209ENST00000554913 CARD14Q9BXL6 1004 aa21.53■■□□□ 1.04
XRCC3-209ENST00000554913 GSE1Q14687 1217 aa21.53■■□□□ 1.04
XRCC3-209ENST00000554913 CFAP70Q5T0N1 1121 aa21.53■■□□□ 1.04
XRCC3-209ENST00000554913 E9PSI1 815 aa21.52■■□□□ 1.04
XRCC3-209ENST00000554913 IGHDP01880 384 aa21.51■■□□□ 1.03
XRCC3-209ENST00000554913 ASXL2Q76L83 1435 aa21.5■■□□□ 1.03
XRCC3-209ENST00000554913 KDM5AP29375 1690 aaKnown RBP21.49■■□□□ 1.03
XRCC3-209ENST00000554913 ERVK-7P63135 1459 aa21.48■■□□□ 1.03
XRCC3-209ENST00000554913 ADGRF5Q8IZF2 1346 aa21.47■■□□□ 1.03
XRCC3-209ENST00000554913 ZFYVE16Q7Z3T8 1539 aa21.47■■□□□ 1.03
XRCC3-209ENST00000554913 RTEL1-TNFRSF6BF6WH68 1400 aa21.47■■□□□ 1.03
XRCC3-209ENST00000554913 FRAT1Q92837 279 aaPredicted RBP21.47■■□□□ 1.03
XRCC3-209ENST00000554913 BRPF3Q9ULD4 1205 aa21.46■■□□□ 1.03
XRCC3-209ENST00000554913 KIF3BO15066 747 aa21.45■■□□□ 1.02
XRCC3-209ENST00000554913 PANK1Q8TE04 598 aa21.45■■□□□ 1.02
XRCC3-209ENST00000554913 FRAT2O75474 233 aaPredicted RBP21.44■■□□□ 1.02
XRCC3-209ENST00000554913 WWC1Q8IX03 1113 aa21.44■■□□□ 1.02
XRCC3-209ENST00000554913 COG6Q9Y2V7 657 aa21.44■■□□□ 1.02
XRCC3-209ENST00000554913 TET3O43151 1660 aa21.44■■□□□ 1.02
XRCC3-209ENST00000554913 ANO8Q9HCE9 1232 aaPredicted RBP21.44■■□□□ 1.02
XRCC3-209ENST00000554913 ABCA9Q8IUA7 1624 aa21.43■■□□□ 1.02
XRCC3-209ENST00000554913 CENPJQ9HC77 1338 aaPredicted RBP21.43■■□□□ 1.02
XRCC3-209ENST00000554913 KANK1Q14678 1352 aa21.43■■□□□ 1.02
XRCC3-209ENST00000554913 PDE3AQ14432 1141 aa21.43■■□□□ 1.02
XRCC3-209ENST00000554913 UGGT1Q9NYU2 1555 aa21.43■■□□□ 1.02
XRCC3-209ENST00000554913 DEPDC5O75140 1603 aa21.43■■□□□ 1.02
XRCC3-209ENST00000554913 CGNL1Q0VF96 1302 aa21.42■■□□□ 1.02
XRCC3-209ENST00000554913 KIAA1210Q9ULL0 1709 aa21.42■■□□□ 1.02
XRCC3-209ENST00000554913 USP19O94966 1318 aa21.42■■□□□ 1.02
XRCC3-209ENST00000554913 FANCAO15360 1455 aa21.42■■□□□ 1.02
XRCC3-209ENST00000554913 CLUAP1Q96AJ1 413 aa21.42■■□□□ 1.02
XRCC3-209ENST00000554913 ARAP3Q8WWN8 1544 aa21.41■■□□□ 1.02
XRCC3-209ENST00000554913 CANXP27824 592 aaKnown RBP21.41■■□□□ 1.02
XRCC3-209ENST00000554913 NGEFQ8N5V2 710 aa21.41■■□□□ 1.02
XRCC3-209ENST00000554913 NEUROD2Q15784 382 aa21.4■■□□□ 1.02
XRCC3-209ENST00000554913 SEC24BO95487 1268 aa21.4■■□□□ 1.02
XRCC3-209ENST00000554913 SLC24A1O60721 1099 aa21.39■■□□□ 1.02
XRCC3-209ENST00000554913 ABCA6Q8N139 1617 aa21.39■■□□□ 1.02
XRCC3-209ENST00000554913 RRP7AQ9Y3A4 280 aaKnown RBP21.39■■□□□ 1.01
XRCC3-209ENST00000554913 MAP3K4Q9Y6R4 1608 aa21.39■■□□□ 1.01
XRCC3-209ENST00000554913 TNNT2P45379 298 aaPredicted RBP21.38■■□□□ 1.01
XRCC3-209ENST00000554913 POLR3AO14802 1390 aaPredicted RBP21.38■■□□□ 1.01
XRCC3-209ENST00000554913 VWDEQ8N2E2 1590 aa21.38■■□□□ 1.01
XRCC3-209ENST00000554913 MYOM2P54296 1465 aa21.37■■□□□ 1.01
XRCC3-209ENST00000554913 ATP7AQ04656 1500 aa21.35■■□□□ 1.01
XRCC3-209ENST00000554913 MORC1Q86VD1 984 aa21.35■■□□□ 1.01
XRCC3-209ENST00000554913 NPM1P06748 294 aaKnown RBP eCLIP21.34■■□□□ 1.01
XRCC3-209ENST00000554913 MAPK8IP3Q9UPT6 1336 aa21.34■■□□□ 1.01
XRCC3-209ENST00000554913 TNNQ9UQP3 1299 aa21.34■■□□□ 1.01
XRCC3-209ENST00000554913 NINLQ9Y2I6 1382 aa21.34■■□□□ 1.01
XRCC3-209ENST00000554913 RARSP54136 660 aaKnown RBP21.33■■□□□ 1.01
XRCC3-209ENST00000554913 ADGRL1O94910 1474 aa21.33■■□□□ 1.01
XRCC3-209ENST00000554913 NSD3Q9BZ95 1437 aa21.33■■□□□ 1.01
XRCC3-209ENST00000554913 SLC12A5Q9H2X9 1139 aa21.33■■□□□ 1
XRCC3-209ENST00000554913 NEURL4Q96JN8 1562 aa21.33■■□□□ 1
XRCC3-209ENST00000554913 TCP11L2Q8N4U5 519 aa21.32■■□□□ 1
XRCC3-209ENST00000554913 RUNDC1Q96C34 613 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms