RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 INSRP06213 1382 aa20.16■□□□□ 0.82
SYNE3-203ENST00000554873 ERBINQ96RT1 1412 aa20.16■□□□□ 0.82
SYNE3-203ENST00000554873 PRDM15P57071 1507 aaPredicted RBP20.16■□□□□ 0.82
SYNE3-203ENST00000554873 GOLGA6L3A6NEY3 463 aa20.16■□□□□ 0.82
SYNE3-203ENST00000554873 PREX2Q70Z35 1606 aa20.15■□□□□ 0.82
SYNE3-203ENST00000554873 TMF1P82094 1093 aa20.14■□□□□ 0.82
SYNE3-203ENST00000554873 FSD2A1L4K1 749 aa20.14■□□□□ 0.81
SYNE3-203ENST00000554873 TPM2P07951 284 aa20.14■□□□□ 0.81
SYNE3-203ENST00000554873 CENPQQ7L2Z9 268 aaPredicted RBP20.14■□□□□ 0.81
SYNE3-203ENST00000554873 AAMPQ13685 434 aa20.13■□□□□ 0.81
SYNE3-203ENST00000554873 SYCP2Q9BX26 1530 aa20.13■□□□□ 0.81
SYNE3-203ENST00000554873 LAMC1P11047 1609 aa20.13■□□□□ 0.81
SYNE3-203ENST00000554873 UNC13BO14795 1591 aa20.13■□□□□ 0.81
SYNE3-203ENST00000554873 ZMYM4Q5VZL5 1548 aa20.12■□□□□ 0.81
SYNE3-203ENST00000554873 A0A0U1RQG5 324 aaPredicted RBP20.12■□□□□ 0.81
SYNE3-203ENST00000554873 PRDM4Q9UKN5 801 aa20.12■□□□□ 0.81
SYNE3-203ENST00000554873 PLEKHH2Q8IVE3 1493 aa20.12■□□□□ 0.81
SYNE3-203ENST00000554873 ADAMTS8Q9UP79 889 aa20.11■□□□□ 0.81
SYNE3-203ENST00000554873 MAST1Q9Y2H9 1570 aa20.09■□□□□ 0.81
SYNE3-203ENST00000554873 C20orf194Q5TEA3 1177 aa20.08■□□□□ 0.8
SYNE3-203ENST00000554873 MYO5CQ9NQX4 1742 aa20.08■□□□□ 0.8
SYNE3-203ENST00000554873 ARHGAP5Q13017 1502 aa20.08■□□□□ 0.8
SYNE3-203ENST00000554873 PANK2Q9BZ23 570 aa20.08■□□□□ 0.8
SYNE3-203ENST00000554873 IQGAP3Q86VI3 1631 aa20.07■□□□□ 0.8
SYNE3-203ENST00000554873 BECN1Q14457 450 aa20.07■□□□□ 0.8
SYNE3-203ENST00000554873 FGD1P98174 961 aa20.06■□□□□ 0.8
SYNE3-203ENST00000554873 EIF2AK4Q9P2K8 1649 aaKnown RBP20.06■□□□□ 0.8
SYNE3-203ENST00000554873 ESPNB1AK53 854 aa20.06■□□□□ 0.8
SYNE3-203ENST00000554873 ATP10AO60312 1499 aa20.05■□□□□ 0.8
SYNE3-203ENST00000554873 ARXQ96QS3 562 aa20.05■□□□□ 0.8
SYNE3-203ENST00000554873 TTC37Q6PGP7 1564 aa20.05■□□□□ 0.8
SYNE3-203ENST00000554873 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.04■□□□□ 0.8
SYNE3-203ENST00000554873 PPP2R1AP30153 589 aa20.03■□□□□ 0.8
SYNE3-203ENST00000554873 MAGI2Q86UL8 1455 aa20.03■□□□□ 0.8
SYNE3-203ENST00000554873 MRE11P49959 708 aa20.03■□□□□ 0.8
SYNE3-203ENST00000554873 KNSTRNQ9Y448 316 aa20.02■□□□□ 0.8
SYNE3-203ENST00000554873 PLXNC1O60486 1568 aa20.02■□□□□ 0.8
SYNE3-203ENST00000554873 WDR7Q9Y4E6 1490 aa20.02■□□□□ 0.8
SYNE3-203ENST00000554873 PLEKHH1Q9ULM0 1364 aa20.02■□□□□ 0.79
SYNE3-203ENST00000554873 DUSP27Q5VZP5 1158 aa20.01■□□□□ 0.79
SYNE3-203ENST00000554873 SLKQ9H2G2 1235 aaPredicted RBP20.01■□□□□ 0.79
SYNE3-203ENST00000554873 ANTXR1Q9H6X2 564 aa20■□□□□ 0.79
SYNE3-203ENST00000554873 DUOX2Q9NRD8 1548 aa20■□□□□ 0.79
SYNE3-203ENST00000554873 AMER1Q5JTC6 1135 aaPredicted RBP20■□□□□ 0.79
SYNE3-203ENST00000554873 WDR43Q15061 677 aaKnown RBP eCLIP19.99■□□□□ 0.79
SYNE3-203ENST00000554873 USP19O94966 1318 aa19.99■□□□□ 0.79
SYNE3-203ENST00000554873 MYH16Q9H6N6 1097 aa19.98■□□□□ 0.79
SYNE3-203ENST00000554873 RGS3P49796 1198 aa19.98■□□□□ 0.79
SYNE3-203ENST00000554873 ZNF521Q96K83 1311 aa19.98■□□□□ 0.79
SYNE3-203ENST00000554873 RNF17Q9BXT8 1623 aaKnown RBP19.98■□□□□ 0.79
SYNE3-203ENST00000554873 ERBB4Q15303 1308 aa19.97■□□□□ 0.79
SYNE3-203ENST00000554873 GOLGA2Q08379 1002 aa19.96■□□□□ 0.79
SYNE3-203ENST00000554873 ISY1Q9ULR0 285 aaKnown RBP19.94■□□□□ 0.78
SYNE3-203ENST00000554873 GZF1Q9H116 711 aaPredicted RBP19.93■□□□□ 0.78
SYNE3-203ENST00000554873 MCM4P33991 863 aa19.93■□□□□ 0.78
SYNE3-203ENST00000554873 TRIM44Q96DX7 344 aaPredicted RBP19.92■□□□□ 0.78
SYNE3-203ENST00000554873 SLFN5Q08AF3 891 aa19.92■□□□□ 0.78
SYNE3-203ENST00000554873 CDCA8Q53HL2 280 aa19.92■□□□□ 0.78
SYNE3-203ENST00000554873 GRPEL1Q9HAV7 217 aa19.92■□□□□ 0.78
SYNE3-203ENST00000554873 MAP7D2Q96T17 732 aa19.91■□□□□ 0.78
SYNE3-203ENST00000554873 MADDQ8WXG6 1647 aa19.91■□□□□ 0.78
SYNE3-203ENST00000554873 KIAA1211Q6ZU35 1233 aa19.91■□□□□ 0.78
SYNE3-203ENST00000554873 EFCAB2Q5VUJ9 269 aa19.9■□□□□ 0.78
SYNE3-203ENST00000554873 IQGAP1P46940 1657 aa19.9■□□□□ 0.78
SYNE3-203ENST00000554873 VIRMAQ69YN4 1812 aaKnown RBP19.89■□□□□ 0.78
SYNE3-203ENST00000554873 PDE4CQ08493 712 aa19.89■□□□□ 0.77
SYNE3-203ENST00000554873 CCDC146Q8IYE0 955 aa19.89■□□□□ 0.77
SYNE3-203ENST00000554873 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.89■□□□□ 0.77
SYNE3-203ENST00000554873 PLCH2O75038 1416 aa19.89■□□□□ 0.77
SYNE3-203ENST00000554873 TRMT2AQ8IZ69 625 aaKnown RBP19.89■□□□□ 0.77
SYNE3-203ENST00000554873 SCAF11Q99590 1463 aaKnown RBP19.89■□□□□ 0.77
SYNE3-203ENST00000554873 ASXL1Q8IXJ9 1541 aa19.88■□□□□ 0.77
SYNE3-203ENST00000554873 TRAK2O60296 914 aa19.88■□□□□ 0.77
SYNE3-203ENST00000554873 SPINK5Q9NQ38 1064 aaPredicted RBP19.88■□□□□ 0.77
SYNE3-203ENST00000554873 PIK3C2GO75747 1445 aa19.88■□□□□ 0.77
SYNE3-203ENST00000554873 TRAPPC8Q9Y2L5 1435 aa19.88■□□□□ 0.77
SYNE3-203ENST00000554873 ABCC2Q92887 1545 aa19.87■□□□□ 0.77
SYNE3-203ENST00000554873 SYNMO15061 1565 aa19.86■□□□□ 0.77
SYNE3-203ENST00000554873 SCAPERQ9BY12 1400 aa19.86■□□□□ 0.77
SYNE3-203ENST00000554873 TERF1P54274 439 aa19.85■□□□□ 0.77
SYNE3-203ENST00000554873 SMAP1Q8IYB5 467 aaPredicted RBP19.85■□□□□ 0.77
SYNE3-203ENST00000554873 APAF1O14727 1248 aa19.85■□□□□ 0.77
SYNE3-203ENST00000554873 STAC3Q96MF2 364 aa19.85■□□□□ 0.77
SYNE3-203ENST00000554873 NPC1L1Q9UHC9 1359 aa19.85■□□□□ 0.77
SYNE3-203ENST00000554873 CLASP1Q7Z460 1538 aa19.84■□□□□ 0.77
SYNE3-203ENST00000554873 ERCC6L2Q5T890 1561 aa19.84■□□□□ 0.77
SYNE3-203ENST00000554873 NLRP1Q9C000 1473 aa19.83■□□□□ 0.77
SYNE3-203ENST00000554873 SEC24BO95487 1268 aa19.83■□□□□ 0.76
SYNE3-203ENST00000554873 SHROOM2Q13796 1616 aa19.82■□□□□ 0.76
SYNE3-203ENST00000554873 PTPRTO14522 1441 aa19.82■□□□□ 0.76
SYNE3-203ENST00000554873 AFAP1Q8N556 730 aa19.82■□□□□ 0.76
SYNE3-203ENST00000554873 CHD1O14646 1710 aa19.82■□□□□ 0.76
SYNE3-203ENST00000554873 TRPM2O94759 1503 aa19.82■□□□□ 0.76
SYNE3-203ENST00000554873 SPAG9O60271 1321 aaKnown RBP19.82■□□□□ 0.76
SYNE3-203ENST00000554873 SPHKAPQ2M3C7 1700 aa19.82■□□□□ 0.76
SYNE3-203ENST00000554873 BCAR3O75815 825 aa19.82■□□□□ 0.76
SYNE3-203ENST00000554873 RIPK4P57078 832 aa19.81■□□□□ 0.76
SYNE3-203ENST00000554873 TBC1D2Q9BYX2 928 aa19.81■□□□□ 0.76
SYNE3-203ENST00000554873 ABCC1P33527 1531 aa19.81■□□□□ 0.76
SYNE3-203ENST00000554873 OFD1O75665 1012 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms