RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 RXRBP28702 533 aa16.56■□□□□ 0.24
SRP54-205ENST00000554803 AHDC1Q5TGY3 1603 aaPredicted RBP16.56■□□□□ 0.24
SRP54-205ENST00000554803 SLC26A8Q96RN1 970 aa16.54■□□□□ 0.24
SRP54-205ENST00000554803 KANK4Q5T7N3 995 aaPredicted RBP16.53■□□□□ 0.24
SRP54-205ENST00000554803 CCER1Q8TC90 406 aaPredicted RBP16.53■□□□□ 0.24
SRP54-205ENST00000554803 APLP2Q06481 763 aa16.52■□□□□ 0.24
SRP54-205ENST00000554803 DUOX2Q9NRD8 1548 aa16.51■□□□□ 0.23
SRP54-205ENST00000554803 DIP2AQ14689 1571 aa16.51■□□□□ 0.23
SRP54-205ENST00000554803 STAG3Q9UJ98 1225 aa16.5■□□□□ 0.23
SRP54-205ENST00000554803 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.5■□□□□ 0.23
SRP54-205ENST00000554803 MYO5BQ9ULV0 1848 aa16.48■□□□□ 0.23
SRP54-205ENST00000554803 ADGRB3O60242 1522 aa16.48■□□□□ 0.23
SRP54-205ENST00000554803 RGS12O14924 1447 aa16.47■□□□□ 0.23
SRP54-205ENST00000554803 NCOA3Q9Y6Q9 1424 aa16.47■□□□□ 0.23
SRP54-205ENST00000554803 AFF2P51816 1311 aa16.45■□□□□ 0.22
SRP54-205ENST00000554803 IDI1Q13907 227 aa16.44■□□□□ 0.22
SRP54-205ENST00000554803 ERBINQ96RT1 1412 aa16.43■□□□□ 0.22
SRP54-205ENST00000554803 LMTK2Q8IWU2 1503 aa16.42■□□□□ 0.22
SRP54-205ENST00000554803 CROCC2H7BZ55 1655 aa16.42■□□□□ 0.22
SRP54-205ENST00000554803 NHSL1Q5SYE7 1610 aa16.41■□□□□ 0.22
SRP54-205ENST00000554803 SETBP1Q9Y6X0 1596 aa16.4■□□□□ 0.22
SRP54-205ENST00000554803 CADPS2Q86UW7 1296 aa16.4■□□□□ 0.22
SRP54-205ENST00000554803 PLEKHG1Q9ULL1 1385 aa16.39■□□□□ 0.21
SRP54-205ENST00000554803 NOS1P29475 1434 aa16.39■□□□□ 0.21
SRP54-205ENST00000554803 NUTM2BA6NNL0 878 aaPredicted RBP16.39■□□□□ 0.21
SRP54-205ENST00000554803 NUTM2EB1AL46 878 aaPredicted RBP16.39■□□□□ 0.21
SRP54-205ENST00000554803 RBM6P78332 1123 aaKnown RBP16.39■□□□□ 0.21
SRP54-205ENST00000554803 NUTM2AQ8IVF1 878 aaPredicted RBP16.39■□□□□ 0.21
SRP54-205ENST00000554803 BCANQ96GW7 911 aa16.39■□□□□ 0.21
SRP54-205ENST00000554803 GCC2Q8IWJ2 1684 aa16.39■□□□□ 0.21
SRP54-205ENST00000554803 KIF15Q9NS87 1388 aa16.38■□□□□ 0.21
SRP54-205ENST00000554803 ZFYVE9O95405 1425 aa16.38■□□□□ 0.21
SRP54-205ENST00000554803 EP400Q96L91 3159 aa16.38■□□□□ 0.21
SRP54-205ENST00000554803 KANK1Q14678 1352 aa16.38■□□□□ 0.21
SRP54-205ENST00000554803 FOXD1Q16676 465 aa16.37■□□□□ 0.21
SRP54-205ENST00000554803 NUTM2DQ5VT03 806 aaPredicted RBP16.37■□□□□ 0.21
SRP54-205ENST00000554803 QTRT2Q9H974 415 aaKnown RBP16.37■□□□□ 0.21
SRP54-205ENST00000554803 ZRANB1Q9UGI0 708 aa16.37■□□□□ 0.21
SRP54-205ENST00000554803 ATAD2Q6PL18 1390 aa16.37■□□□□ 0.21
SRP54-205ENST00000554803 SETD5Q9C0A6 1442 aa16.36■□□□□ 0.21
SRP54-205ENST00000554803 BRINP3Q76B58 766 aa16.36■□□□□ 0.21
SRP54-205ENST00000554803 C14orf37Q86TY3 774 aa16.36■□□□□ 0.21
SRP54-205ENST00000554803 C19orf44Q9H6X5 657 aa16.36■□□□□ 0.21
SRP54-205ENST00000554803 MYOM3Q5VTT5 1437 aa16.36■□□□□ 0.21
SRP54-205ENST00000554803 CENPBP07199 599 aaPredicted RBP16.35■□□□□ 0.21
SRP54-205ENST00000554803 ATF3P18847 181 aa16.35■□□□□ 0.21
SRP54-205ENST00000554803 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.35■□□□□ 0.21
SRP54-205ENST00000554803 CLSPNQ9HAW4 1339 aa16.35■□□□□ 0.21
SRP54-205ENST00000554803 ASXL1Q8IXJ9 1541 aa16.35■□□□□ 0.21
SRP54-205ENST00000554803 TBX22Q9Y458 520 aa16.34■□□□□ 0.21
SRP54-205ENST00000554803 SLC52A1Q9NWF4 448 aa16.33■□□□□ 0.2
SRP54-205ENST00000554803 RIMS2Q9UQ26 1411 aa16.33■□□□□ 0.2
SRP54-205ENST00000554803 TMEM131LA2VDJ0 1609 aa16.33■□□□□ 0.2
SRP54-205ENST00000554803 C8orf37Q96NL8 207 aa16.32■□□□□ 0.2
SRP54-205ENST00000554803 DCCP43146 1447 aa16.31■□□□□ 0.2
SRP54-205ENST00000554803 NGLY1Q96IV0 654 aa16.31■□□□□ 0.2
SRP54-205ENST00000554803 ADAMTS13Q76LX8 1427 aa16.3■□□□□ 0.2
SRP54-205ENST00000554803 PIK3R4Q99570 1358 aa16.3■□□□□ 0.2
SRP54-205ENST00000554803 PPP1R15AO75807 674 aaPredicted RBP16.29■□□□□ 0.2
SRP54-205ENST00000554803 RRP7BPQ9NSQ0 103 aa16.29■□□□□ 0.2
SRP54-205ENST00000554803 PNPLA6Q8IY17 1366 aa16.28■□□□□ 0.2
SRP54-205ENST00000554803 HDGFP51858 240 aaKnown RBP16.28■□□□□ 0.2
SRP54-205ENST00000554803 DIEXFQ68CQ4 756 aaKnown RBP16.28■□□□□ 0.2
SRP54-205ENST00000554803 LRRC59Q96AG4 307 aaKnown RBP16.28■□□□□ 0.2
SRP54-205ENST00000554803 TRPM2O94759 1503 aa16.27■□□□□ 0.2
SRP54-205ENST00000554803 RPRD2Q5VT52 1461 aaKnown RBP16.27■□□□□ 0.19
SRP54-205ENST00000554803 ABCC5O15440 1437 aa16.27■□□□□ 0.19
SRP54-205ENST00000554803 MST1RQ04912 1400 aa16.27■□□□□ 0.19
SRP54-205ENST00000554803 LRP5O75197 1615 aa16.27■□□□□ 0.19
SRP54-205ENST00000554803 PTPN23Q9H3S7 1636 aa16.27■□□□□ 0.19
SRP54-205ENST00000554803 ACIN1Q9UKV3 1341 aaKnown RBP16.26■□□□□ 0.19
SRP54-205ENST00000554803 RRBP1Q9P2E9 1410 aaKnown RBP16.26■□□□□ 0.19
SRP54-205ENST00000554803 XRN1Q8IZH2 1706 aaKnown RBP16.25■□□□□ 0.19
SRP54-205ENST00000554803 ZNF316A6NFI3 1004 aaPredicted RBP16.24■□□□□ 0.19
SRP54-205ENST00000554803 CCDC125Q86Z20 511 aa16.24■□□□□ 0.19
SRP54-205ENST00000554803 LAMC1P11047 1609 aa16.23■□□□□ 0.19
SRP54-205ENST00000554803 PTPRUQ92729 1446 aa16.23■□□□□ 0.19
SRP54-205ENST00000554803 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.23■□□□□ 0.19
SRP54-205ENST00000554803 UNC13BO14795 1591 aa16.22■□□□□ 0.19
SRP54-205ENST00000554803 DAPK1P53355 1430 aa16.21■□□□□ 0.19
SRP54-205ENST00000554803 TRPC5Q9UL62 973 aaPredicted RBP16.21■□□□□ 0.19
SRP54-205ENST00000554803 ATRNO75882 1429 aa16.2■□□□□ 0.18
SRP54-205ENST00000554803 MARF1Q9Y4F3 1742 aaKnown RBP16.2■□□□□ 0.18
SRP54-205ENST00000554803 AMOTL2Q9Y2J4 779 aa16.2■□□□□ 0.18
SRP54-205ENST00000554803 NALCNQ8IZF0 1738 aa16.19■□□□□ 0.18
SRP54-205ENST00000554803 ADAMTS2O95450 1211 aa16.19■□□□□ 0.18
SRP54-205ENST00000554803 USP21Q9UK80 565 aa16.19■□□□□ 0.18
SRP54-205ENST00000554803 DDX17Q92841 729 aaKnown RBP16.18■□□□□ 0.18
SRP54-205ENST00000554803 NRXN3Q9Y4C0 1643 aa16.18■□□□□ 0.18
SRP54-205ENST00000554803 PTCH1Q13635 1447 aa16.18■□□□□ 0.18
SRP54-205ENST00000554803 ANKRD30AQ9BXX3 1397 aa16.17■□□□□ 0.18
SRP54-205ENST00000554803 COL22A1Q8NFW1 1626 aaPredicted RBP16.17■□□□□ 0.18
SRP54-205ENST00000554803 FNBP4Q8N3X1 1017 aaPredicted RBP16.17■□□□□ 0.18
SRP54-205ENST00000554803 BRWD3Q6RI45 1802 aa16.15■□□□□ 0.18
SRP54-205ENST00000554803 E9PCH4 1651 aa16.14■□□□□ 0.18
SRP54-205ENST00000554803 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.14■□□□□ 0.17
SRP54-205ENST00000554803 ADGRL3Q9HAR2 1447 aa16.14■□□□□ 0.17
SRP54-205ENST00000554803 FAM50AQ14320 339 aaKnown RBP16.14■□□□□ 0.17
SRP54-205ENST00000554803 CHGAP10645 457 aaKnown RBP16.13■□□□□ 0.17
SRP54-205ENST00000554803 SPHKAPQ2M3C7 1700 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms