RNA–Protein interactions for RNA: ENST00000553999.5

HIF1A-206, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-206ENST00000553999 PPP1R15AO75807 674 aaPredicted RBP31.1■■■□□ 2.57
HIF1A-206ENST00000553999 RIMS2Q9UQ26 1411 aa31.08■■■□□ 2.57
HIF1A-206ENST00000553999 PIP4K2BP78356 416 aa31.07■■■□□ 2.56
HIF1A-206ENST00000553999 SPHKAPQ2M3C7 1700 aa31.04■■■□□ 2.56
HIF1A-206ENST00000553999 LRRC7Q96NW7 1537 aa31.03■■■□□ 2.56
HIF1A-206ENST00000553999 ZFYVE9O95405 1425 aa31.03■■■□□ 2.56
HIF1A-206ENST00000553999 RBM33Q96EV2 1170 aaKnown RBP30.98■■■□□ 2.55
HIF1A-206ENST00000553999 SLC4A1APQ9BWU0 796 aaKnown RBP30.96■■■□□ 2.55
HIF1A-206ENST00000553999 CLTCL1P53675 1640 aa30.95■■■□□ 2.55
HIF1A-206ENST00000553999 TOM1O60784 492 aa30.95■■■□□ 2.55
HIF1A-206ENST00000553999 ZNF326Q5BKZ1 582 aaKnown RBP30.95■■■□□ 2.55
HIF1A-206ENST00000553999 PLEKHG1Q9ULL1 1385 aa30.94■■■□□ 2.54
HIF1A-206ENST00000553999 FOXD1Q16676 465 aa30.94■■■□□ 2.54
HIF1A-206ENST00000553999 HDGFP51858 240 aaKnown RBP30.92■■■□□ 2.54
HIF1A-206ENST00000553999 TRPM2O94759 1503 aa30.9■■■□□ 2.54
HIF1A-206ENST00000553999 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.9■■■□□ 2.54
HIF1A-206ENST00000553999 ALKQ9UM73 1620 aa30.89■■■□□ 2.54
HIF1A-206ENST00000553999 KCNA6P17658 529 aa30.89■■■□□ 2.54
HIF1A-206ENST00000553999 PROSER2Q86WR7 435 aaPredicted RBP30.87■■■□□ 2.53
HIF1A-206ENST00000553999 TMEM94Q12767 1356 aa30.87■■■□□ 2.53
HIF1A-206ENST00000553999 XIRP1Q702N8 1843 aaKnown RBP30.87■■■□□ 2.53
HIF1A-206ENST00000553999 HSPA1LP34931 641 aa30.84■■■□□ 2.53
HIF1A-206ENST00000553999 ADAMTS13Q76LX8 1427 aa30.82■■■□□ 2.52
HIF1A-206ENST00000553999 NWD1Q149M9 1564 aa30.82■■■□□ 2.52
HIF1A-206ENST00000553999 KIF1BO60333 1816 aa30.77■■■□□ 2.52
HIF1A-206ENST00000553999 NKTRP30414 1462 aaKnown RBP30.77■■■□□ 2.52
HIF1A-206ENST00000553999 SETD5Q9C0A6 1442 aa30.77■■■□□ 2.52
HIF1A-206ENST00000553999 DISP3Q9P2K9 1392 aa30.77■■■□□ 2.52
HIF1A-206ENST00000553999 TBX22Q9Y458 520 aa30.76■■■□□ 2.51
HIF1A-206ENST00000553999 NEXMIFQ5QGS0 1516 aa30.75■■■□□ 2.51
HIF1A-206ENST00000553999 MPHOSPH9Q99550 1183 aa30.75■■■□□ 2.51
HIF1A-206ENST00000553999 CHD2O14647 1828 aaKnown RBP30.74■■■□□ 2.51
HIF1A-206ENST00000553999 DIP2AQ14689 1571 aa30.73■■■□□ 2.51
HIF1A-206ENST00000553999 NRXN3Q9Y4C0 1643 aa30.73■■■□□ 2.51
HIF1A-206ENST00000553999 RAB3GAP2Q9H2M9 1393 aa30.71■■■□□ 2.51
HIF1A-206ENST00000553999 C14orf37Q86TY3 774 aa30.71■■■□□ 2.51
HIF1A-206ENST00000553999 PTPRUQ92729 1446 aa30.69■■■□□ 2.5
HIF1A-206ENST00000553999 MSH6P52701 1360 aa30.66■■■□□ 2.5
HIF1A-206ENST00000553999 SETBP1Q9Y6X0 1596 aa30.66■■■□□ 2.5
HIF1A-206ENST00000553999 AMOTL2Q9Y2J4 779 aa30.66■■■□□ 2.5
HIF1A-206ENST00000553999 CCDC144AA2RUR9 1427 aa30.65■■■□□ 2.5
HIF1A-206ENST00000553999 METP08581 1390 aa30.65■■■□□ 2.5
HIF1A-206ENST00000553999 RGL3Q3MIN7 710 aa30.64■■■□□ 2.5
HIF1A-206ENST00000553999 PIK3R4Q99570 1358 aa30.6■■■□□ 2.49
HIF1A-206ENST00000553999 ROBO1Q9Y6N7 1651 aa30.57■■■□□ 2.48
HIF1A-206ENST00000553999 XRN1Q8IZH2 1706 aaKnown RBP30.56■■■□□ 2.48
HIF1A-206ENST00000553999 PPLO60437 1756 aa30.56■■■□□ 2.48
HIF1A-206ENST00000553999 VGFO15240 615 aaPredicted RBP30.55■■■□□ 2.48
HIF1A-206ENST00000553999 RPGRIP1LQ68CZ1 1315 aa30.52■■■□□ 2.48
HIF1A-206ENST00000553999 MED1Q15648 1581 aaPredicted RBP30.52■■■□□ 2.48
HIF1A-206ENST00000553999 SLAIN2Q9P270 581 aa30.51■■■□□ 2.47
HIF1A-206ENST00000553999 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.5■■■□□ 2.47
HIF1A-206ENST00000553999 ADGRF5Q8IZF2 1346 aa30.5■■■□□ 2.47
HIF1A-206ENST00000553999 FAM135BQ49AJ0 1406 aa30.5■■■□□ 2.47
HIF1A-206ENST00000553999 SPATA31E1Q6ZUB1 1445 aa30.5■■■□□ 2.47
HIF1A-206ENST00000553999 ILDR2Q71H61 639 aa30.5■■■□□ 2.47
HIF1A-206ENST00000553999 ATF3P18847 181 aa30.48■■■□□ 2.47
HIF1A-206ENST00000553999 SETD1AO15047 1707 aaKnown RBP30.47■■■□□ 2.47
HIF1A-206ENST00000553999 C19orf44Q9H6X5 657 aa30.45■■■□□ 2.47
HIF1A-206ENST00000553999 NCOA3Q9Y6Q9 1424 aa30.44■■■□□ 2.46
HIF1A-206ENST00000553999 ACIN1Q9UKV3 1341 aaKnown RBP30.43■■■□□ 2.46
HIF1A-206ENST00000553999 CADPS2Q86UW7 1296 aa30.42■■■□□ 2.46
HIF1A-206ENST00000553999 IFT172Q9UG01 1749 aa30.42■■■□□ 2.46
HIF1A-206ENST00000553999 ROBO2Q9HCK4 1378 aa30.39■■■□□ 2.45
HIF1A-206ENST00000553999 NALCNQ8IZF0 1738 aa30.39■■■□□ 2.45
HIF1A-206ENST00000553999 STK26Q9P289 416 aa30.38■■■□□ 2.45
HIF1A-206ENST00000553999 PHLPP1O60346 1717 aa30.38■■■□□ 2.45
HIF1A-206ENST00000553999 ANKRD30BQ9BXX2 1392 aa30.38■■■□□ 2.45
HIF1A-206ENST00000553999 PHF23Q9BUL5 403 aaPredicted RBP30.37■■■□□ 2.45
HIF1A-206ENST00000553999 ADGRL3Q9HAR2 1447 aa30.36■■■□□ 2.45
HIF1A-206ENST00000553999 TMEM132EQ6IEE7 984 aa30.35■■■□□ 2.45
HIF1A-206ENST00000553999 PTCH1Q13635 1447 aa30.32■■■□□ 2.44
HIF1A-206ENST00000553999 ASXL1Q8IXJ9 1541 aa30.32■■■□□ 2.44
HIF1A-206ENST00000553999 PIK3C2GO75747 1445 aa30.3■■■□□ 2.44
HIF1A-206ENST00000553999 MST1RQ04912 1400 aa30.3■■■□□ 2.44
HIF1A-206ENST00000553999 BRINP3Q76B58 766 aa30.3■■■□□ 2.44
HIF1A-206ENST00000553999 DCCP43146 1447 aa30.3■■■□□ 2.44
HIF1A-206ENST00000553999 KDM2AQ9Y2K7 1162 aa30.27■■■□□ 2.44
HIF1A-206ENST00000553999 COL16A1Q07092 1604 aaPredicted RBP30.26■■■□□ 2.44
HIF1A-206ENST00000553999 CFAP70Q5T0N1 1121 aa30.25■■■□□ 2.43
HIF1A-206ENST00000553999 DDX17Q92841 729 aaKnown RBP30.25■■■□□ 2.43
HIF1A-206ENST00000553999 HRCP23327 699 aa30.24■■■□□ 2.43
HIF1A-206ENST00000553999 WAPLQ7Z5K2 1190 aa30.24■■■□□ 2.43
HIF1A-206ENST00000553999 MYOM2P54296 1465 aa30.23■■■□□ 2.43
HIF1A-206ENST00000553999 PLEKHH1Q9ULM0 1364 aa30.22■■■□□ 2.43
HIF1A-206ENST00000553999 LRPPRCP42704 1394 aaKnown RBP30.21■■■□□ 2.43
HIF1A-206ENST00000553999 AHDC1Q5TGY3 1603 aaPredicted RBP30.21■■■□□ 2.43
HIF1A-206ENST00000553999 JCADQ9P266 1359 aa30.2■■■□□ 2.43
HIF1A-206ENST00000553999 DCAF11Q8TEB1 546 aa30.2■■■□□ 2.43
HIF1A-206ENST00000553999 PRAG1Q86YV5 1406 aa30.19■■■□□ 2.42
HIF1A-206ENST00000553999 YTHDC2Q9H6S0 1430 aaKnown RBP30.19■■■□□ 2.42
HIF1A-206ENST00000553999 NRXN1Q9ULB1 1477 aa30.19■■■□□ 2.42
HIF1A-206ENST00000553999 NUTM2FA1L443 756 aa30.18■■■□□ 2.42
HIF1A-206ENST00000553999 C1orf167Q5SNV9 1468 aa30.18■■■□□ 2.42
HIF1A-206ENST00000553999 C14orf93Q9H972 538 aaKnown RBP30.17■■■□□ 2.42
HIF1A-206ENST00000553999 SAFB2Q14151 953 aaKnown RBP eCLIP30.15■■■□□ 2.42
HIF1A-206ENST00000553999 ORAI2Q96SN7 254 aa30.15■■■□□ 2.42
HIF1A-206ENST00000553999 TECPR2O15040 1411 aa30.13■■■□□ 2.41
HIF1A-206ENST00000553999 KNDC1Q76NI1 1749 aa30.13■■■□□ 2.41
HIF1A-206ENST00000553999 LAMC1P11047 1609 aa30.12■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms