RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 ABCA6Q8N139 1617 aa16.34■□□□□ 0.21
HDAC7-230ENST00000552960 CFAP65Q6ZU64 1925 aaKnown RBP16.34■□□□□ 0.21
HDAC7-230ENST00000552960 CHGAP10645 457 aaKnown RBP16.34■□□□□ 0.21
HDAC7-230ENST00000552960 CC2D1BQ5T0F9 858 aaKnown RBP16.33■□□□□ 0.21
HDAC7-230ENST00000552960 MLH3Q9UHC1 1453 aa16.33■□□□□ 0.21
HDAC7-230ENST00000552960 MYBBP1AQ9BQG0 1328 aaKnown RBP16.33■□□□□ 0.2
HDAC7-230ENST00000552960 SLC4A3P48751 1232 aa16.33■□□□□ 0.2
HDAC7-230ENST00000552960 MAP3K4Q9Y6R4 1608 aa16.33■□□□□ 0.2
HDAC7-230ENST00000552960 WASHC2CQ9Y4E1 1318 aa16.32■□□□□ 0.2
HDAC7-230ENST00000552960 NEO1Q92859 1461 aa16.32■□□□□ 0.2
HDAC7-230ENST00000552960 HECW2Q9P2P5 1572 aa16.32■□□□□ 0.2
HDAC7-230ENST00000552960 PRDM15P57071 1507 aaPredicted RBP16.32■□□□□ 0.2
HDAC7-230ENST00000552960 CLTCL1P53675 1640 aa16.31■□□□□ 0.2
HDAC7-230ENST00000552960 VWDEQ8N2E2 1590 aa16.31■□□□□ 0.2
HDAC7-230ENST00000552960 NUTM2DQ5VT03 806 aaPredicted RBP16.31■□□□□ 0.2
HDAC7-230ENST00000552960 BACH2Q9BYV9 841 aa16.31■□□□□ 0.2
HDAC7-230ENST00000552960 DIP2BQ9P265 1576 aa16.31■□□□□ 0.2
HDAC7-230ENST00000552960 EIF5BO60841 1220 aaKnown RBP16.3■□□□□ 0.2
HDAC7-230ENST00000552960 PTPRTO14522 1441 aa16.3■□□□□ 0.2
HDAC7-230ENST00000552960 DAXXQ9UER7 740 aaPredicted RBP16.3■□□□□ 0.2
HDAC7-230ENST00000552960 RALBP1Q15311 655 aa16.29■□□□□ 0.2
HDAC7-230ENST00000552960 PPRC1Q5VV67 1664 aaKnown RBP16.29■□□□□ 0.2
HDAC7-230ENST00000552960 CEP152O94986 1710 aa16.29■□□□□ 0.2
HDAC7-230ENST00000552960 CFAP74Q9C0B2 1584 aa16.28■□□□□ 0.2
HDAC7-230ENST00000552960 TRPM2O94759 1503 aa16.28■□□□□ 0.2
HDAC7-230ENST00000552960 TET3O43151 1660 aa16.28■□□□□ 0.2
HDAC7-230ENST00000552960 NPATQ14207 1427 aa16.28■□□□□ 0.2
HDAC7-230ENST00000552960 CRBNQ96SW2 442 aa16.27■□□□□ 0.2
HDAC7-230ENST00000552960 MLECQ14165 292 aa16.27■□□□□ 0.19
HDAC7-230ENST00000552960 ADGRF5Q8IZF2 1346 aa16.27■□□□□ 0.19
HDAC7-230ENST00000552960 SPHKAPQ2M3C7 1700 aa16.26■□□□□ 0.19
HDAC7-230ENST00000552960 COL17A1Q9UMD9 1497 aaPredicted RBP16.26■□□□□ 0.19
HDAC7-230ENST00000552960 DIP2CQ9Y2E4 1556 aa16.26■□□□□ 0.19
HDAC7-230ENST00000552960 NLRP13Q86W25 1043 aa16.26■□□□□ 0.19
HDAC7-230ENST00000552960 RICTORQ6R327 1708 aa16.26■□□□□ 0.19
HDAC7-230ENST00000552960 TRPM1Q7Z4N2 1603 aa16.26■□□□□ 0.19
HDAC7-230ENST00000552960 BRD4O60885 1362 aaPredicted RBP16.25■□□□□ 0.19
HDAC7-230ENST00000552960 ARID4BQ4LE39 1312 aaPredicted RBP16.25■□□□□ 0.19
HDAC7-230ENST00000552960 EIF2AK4Q9P2K8 1649 aaKnown RBP16.25■□□□□ 0.19
HDAC7-230ENST00000552960 EFCAB6Q5THR3 1501 aa16.25■□□□□ 0.19
HDAC7-230ENST00000552960 PPM1GO15355 546 aaPredicted RBP16.24■□□□□ 0.19
HDAC7-230ENST00000552960 CFAP70Q5T0N1 1121 aa16.24■□□□□ 0.19
HDAC7-230ENST00000552960 GLI2P10070 1586 aa16.23■□□□□ 0.19
HDAC7-230ENST00000552960 KTN1Q86UP2 1357 aaKnown RBP16.23■□□□□ 0.19
HDAC7-230ENST00000552960 FBXO31Q5XUX0 539 aaPredicted RBP16.23■□□□□ 0.19
HDAC7-230ENST00000552960 TESK2Q96S53 571 aa16.23■□□□□ 0.19
HDAC7-230ENST00000552960 LRPPRCP42704 1394 aaKnown RBP16.22■□□□□ 0.19
HDAC7-230ENST00000552960 DISP3Q9P2K9 1392 aa16.22■□□□□ 0.19
HDAC7-230ENST00000552960 C20orf194Q5TEA3 1177 aa16.21■□□□□ 0.19
HDAC7-230ENST00000552960 MS4A1P11836 297 aa16.21■□□□□ 0.18
HDAC7-230ENST00000552960 BRPF3Q9ULD4 1205 aa16.21■□□□□ 0.18
HDAC7-230ENST00000552960 ABCC3O15438 1527 aa16.2■□□□□ 0.18
HDAC7-230ENST00000552960 RNF17Q9BXT8 1623 aaKnown RBP16.2■□□□□ 0.18
HDAC7-230ENST00000552960 POLR1AO95602 1720 aaPredicted RBP16.2■□□□□ 0.18
HDAC7-230ENST00000552960 PDE3BQ13370 1112 aa16.19■□□□□ 0.18
HDAC7-230ENST00000552960 GPRASP1Q5JY77 1395 aa16.19■□□□□ 0.18
HDAC7-230ENST00000552960 RGS3P49796 1198 aa16.19■□□□□ 0.18
HDAC7-230ENST00000552960 USP35Q9P2H5 1018 aa16.19■□□□□ 0.18
HDAC7-230ENST00000552960 DDRGK1Q96HY6 314 aa16.18■□□□□ 0.18
HDAC7-230ENST00000552960 MROH2AA6NES4 1674 aa16.17■□□□□ 0.18
HDAC7-230ENST00000552960 IDI1Q13907 227 aa16.17■□□□□ 0.18
HDAC7-230ENST00000552960 SIGLEC1Q9BZZ2 1709 aa16.17■□□□□ 0.18
HDAC7-230ENST00000552960 MADDQ8WXG6 1647 aa16.17■□□□□ 0.18
HDAC7-230ENST00000552960 TMEM132EQ6IEE7 984 aa16.17■□□□□ 0.18
HDAC7-230ENST00000552960 PANK3Q9H999 370 aa16.17■□□□□ 0.18
HDAC7-230ENST00000552960 NOS1P29475 1434 aa16.16■□□□□ 0.18
HDAC7-230ENST00000552960 NFKBIBQ15653 356 aa16.16■□□□□ 0.18
HDAC7-230ENST00000552960 LMTK2Q8IWU2 1503 aa16.16■□□□□ 0.18
HDAC7-230ENST00000552960 KIF13AQ9H1H9 1805 aa16.14■□□□□ 0.17
HDAC7-230ENST00000552960 GSE1Q14687 1217 aa16.14■□□□□ 0.17
HDAC7-230ENST00000552960 PLPPR3Q6T4P5 718 aa16.13■□□□□ 0.17
HDAC7-230ENST00000552960 ADAMTS8Q9UP79 889 aa16.12■□□□□ 0.17
HDAC7-230ENST00000552960 CAMSAP1Q5T5Y3 1602 aa16.11■□□□□ 0.17
HDAC7-230ENST00000552960 FRAT1Q92837 279 aaPredicted RBP16.11■□□□□ 0.17
HDAC7-230ENST00000552960 TRAK1Q9UPV9 953 aa16.11■□□□□ 0.17
HDAC7-230ENST00000552960 PER1O15534 1290 aaPredicted RBP16.1■□□□□ 0.17
HDAC7-230ENST00000552960 WDR43Q15061 677 aaKnown RBP eCLIP16.1■□□□□ 0.17
HDAC7-230ENST00000552960 SYNMO15061 1565 aa16.1■□□□□ 0.17
HDAC7-230ENST00000552960 PARD3Q8TEW0 1356 aa16.09■□□□□ 0.17
HDAC7-230ENST00000552960 KIF1BO60333 1816 aa16.08■□□□□ 0.16
HDAC7-230ENST00000552960 TRHP20396 242 aaPredicted RBP16.08■□□□□ 0.16
HDAC7-230ENST00000552960 TMF1P82094 1093 aa16.08■□□□□ 0.16
HDAC7-230ENST00000552960 ADGRB3O60242 1522 aa16.08■□□□□ 0.16
HDAC7-230ENST00000552960 ZMYM4Q5VZL5 1548 aa16.07■□□□□ 0.16
HDAC7-230ENST00000552960 FRAT2O75474 233 aaPredicted RBP16.07■□□□□ 0.16
HDAC7-230ENST00000552960 CCDC146Q8IYE0 955 aa16.06■□□□□ 0.16
HDAC7-230ENST00000552960 SAFB2Q14151 953 aaKnown RBP eCLIP16.06■□□□□ 0.16
HDAC7-230ENST00000552960 SCAF11Q99590 1463 aaKnown RBP16.05■□□□□ 0.16
HDAC7-230ENST00000552960 FAM161AQ3B820 660 aa16.05■□□□□ 0.16
HDAC7-230ENST00000552960 CENPQQ7L2Z9 268 aaPredicted RBP16.04■□□□□ 0.16
HDAC7-230ENST00000552960 KNSTRNQ9Y448 316 aa16.04■□□□□ 0.16
HDAC7-230ENST00000552960 ARXQ96QS3 562 aa16.03■□□□□ 0.16
HDAC7-230ENST00000552960 STK26Q9P289 416 aa16.03■□□□□ 0.16
HDAC7-230ENST00000552960 MYOM2P54296 1465 aa16.02■□□□□ 0.16
HDAC7-230ENST00000552960 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.02■□□□□ 0.16
HDAC7-230ENST00000552960 C14orf93Q9H972 538 aaKnown RBP16.02■□□□□ 0.16
HDAC7-230ENST00000552960 LAMC1P11047 1609 aa16.02■□□□□ 0.15
HDAC7-230ENST00000552960 IQGAP1P46940 1657 aa16.02■□□□□ 0.15
HDAC7-230ENST00000552960 GOLGA2Q08379 1002 aa16.01■□□□□ 0.15
HDAC7-230ENST00000552960 IFT172Q9UG01 1749 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms