RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 IDI1Q13907 227 aa25.79■■□□□ 1.72
CDK4-208ENST00000551706 TXNDC2Q86VQ3 553 aa25.79■■□□□ 1.72
CDK4-208ENST00000551706 SLC4A1APQ9BWU0 796 aaKnown RBP25.78■■□□□ 1.72
CDK4-208ENST00000551706 STAG3Q9UJ98 1225 aa25.77■■□□□ 1.72
CDK4-208ENST00000551706 RAB3GAP2Q9H2M9 1393 aa25.77■■□□□ 1.72
CDK4-208ENST00000551706 SETD1AO15047 1707 aaKnown RBP25.77■■□□□ 1.72
CDK4-208ENST00000551706 ARHGAP23Q9P227 1491 aa25.76■■□□□ 1.71
CDK4-208ENST00000551706 SLIT1O75093 1534 aa25.76■■□□□ 1.71
CDK4-208ENST00000551706 ROBO1Q9Y6N7 1651 aa25.74■■□□□ 1.71
CDK4-208ENST00000551706 HRCP23327 699 aa25.73■■□□□ 1.71
CDK4-208ENST00000551706 EID1Q9Y6B2 187 aa25.73■■□□□ 1.71
CDK4-208ENST00000551706 PIK3C2BO00750 1634 aa25.73■■□□□ 1.71
CDK4-208ENST00000551706 TMEM94Q12767 1356 aa25.72■■□□□ 1.71
CDK4-208ENST00000551706 KDM5AP29375 1690 aaKnown RBP25.72■■□□□ 1.71
CDK4-208ENST00000551706 ADGRB3O60242 1522 aa25.69■■□□□ 1.7
CDK4-208ENST00000551706 MPHOSPH9Q99550 1183 aa25.69■■□□□ 1.7
CDK4-208ENST00000551706 SPHKAPQ2M3C7 1700 aa25.66■■□□□ 1.7
CDK4-208ENST00000551706 TMEM2Q9UHN6 1383 aa25.66■■□□□ 1.7
CDK4-208ENST00000551706 TRPM2O94759 1503 aa25.64■■□□□ 1.7
CDK4-208ENST00000551706 KCNA6P17658 529 aa25.64■■□□□ 1.7
CDK4-208ENST00000551706 PROSER2Q86WR7 435 aaPredicted RBP25.63■■□□□ 1.69
CDK4-208ENST00000551706 CHGAP10645 457 aaKnown RBP25.62■■□□□ 1.69
CDK4-208ENST00000551706 TRIM26Q12899 539 aaPredicted RBP25.62■■□□□ 1.69
CDK4-208ENST00000551706 JCADQ9P266 1359 aa25.61■■□□□ 1.69
CDK4-208ENST00000551706 UPF1Q92900 1129 aaKnown RBP eCLIP25.61■■□□□ 1.69
CDK4-208ENST00000551706 TMEM131LA2VDJ0 1609 aa25.6■■□□□ 1.69
CDK4-208ENST00000551706 HDGFP51858 240 aaKnown RBP25.6■■□□□ 1.69
CDK4-208ENST00000551706 RBM33Q96EV2 1170 aaKnown RBP25.6■■□□□ 1.69
CDK4-208ENST00000551706 PHLPP1O60346 1717 aa25.6■■□□□ 1.69
CDK4-208ENST00000551706 FOXD1Q16676 465 aa25.57■■□□□ 1.68
CDK4-208ENST00000551706 SLC26A8Q96RN1 970 aa25.56■■□□□ 1.68
CDK4-208ENST00000551706 SLAIN2Q9P270 581 aa25.55■■□□□ 1.68
CDK4-208ENST00000551706 CLTCL1P53675 1640 aa25.55■■□□□ 1.68
CDK4-208ENST00000551706 MSH6P52701 1360 aa25.55■■□□□ 1.68
CDK4-208ENST00000551706 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.54■■□□□ 1.68
CDK4-208ENST00000551706 ZFYVE9O95405 1425 aa25.54■■□□□ 1.68
CDK4-208ENST00000551706 RIMS2Q9UQ26 1411 aa25.54■■□□□ 1.68
CDK4-208ENST00000551706 NKTRP30414 1462 aaKnown RBP25.53■■□□□ 1.68
CDK4-208ENST00000551706 ZNF772Q68DY9 489 aaPredicted RBP25.52■■□□□ 1.68
CDK4-208ENST00000551706 CCDC144AA2RUR9 1427 aa25.52■■□□□ 1.68
CDK4-208ENST00000551706 NWD1Q149M9 1564 aa25.51■■□□□ 1.67
CDK4-208ENST00000551706 PPP1R15AO75807 674 aaPredicted RBP25.5■■□□□ 1.67
CDK4-208ENST00000551706 ZNF326Q5BKZ1 582 aaKnown RBP25.49■■□□□ 1.67
CDK4-208ENST00000551706 MEX3CQ5U5Q3 659 aaKnown RBP25.49■■□□□ 1.67
CDK4-208ENST00000551706 COL16A1Q07092 1604 aaPredicted RBP25.48■■□□□ 1.67
CDK4-208ENST00000551706 SPATA31A6Q5VVP1 1343 aa25.48■■□□□ 1.67
CDK4-208ENST00000551706 MYO5BQ9ULV0 1848 aa25.48■■□□□ 1.67
CDK4-208ENST00000551706 LRP6O75581 1613 aa25.48■■□□□ 1.67
CDK4-208ENST00000551706 PLEKHG1Q9ULL1 1385 aa25.45■■□□□ 1.67
CDK4-208ENST00000551706 KIF1BO60333 1816 aa25.45■■□□□ 1.66
CDK4-208ENST00000551706 BCANQ96GW7 911 aa25.43■■□□□ 1.66
CDK4-208ENST00000551706 RPGRIP1LQ68CZ1 1315 aa25.42■■□□□ 1.66
CDK4-208ENST00000551706 RXRBP28702 533 aa25.41■■□□□ 1.66
CDK4-208ENST00000551706 ANKRD30BQ9BXX2 1392 aa25.41■■□□□ 1.66
CDK4-208ENST00000551706 NUTM2DQ5VT03 806 aaPredicted RBP25.39■■□□□ 1.66
CDK4-208ENST00000551706 SPATA31E1Q6ZUB1 1445 aa25.37■■□□□ 1.65
CDK4-208ENST00000551706 NEXMIFQ5QGS0 1516 aa25.37■■□□□ 1.65
CDK4-208ENST00000551706 SHPRHQ149N8 1683 aa25.36■■□□□ 1.65
CDK4-208ENST00000551706 CDK12Q9NYV4 1490 aaPredicted RBP25.36■■□□□ 1.65
CDK4-208ENST00000551706 VGFO15240 615 aaPredicted RBP25.36■■□□□ 1.65
CDK4-208ENST00000551706 CHD2O14647 1828 aaKnown RBP25.35■■□□□ 1.65
CDK4-208ENST00000551706 TBX22Q9Y458 520 aa25.35■■□□□ 1.65
CDK4-208ENST00000551706 SRCAPQ6ZRS2 3230 aa25.34■■□□□ 1.65
CDK4-208ENST00000551706 RGL3Q3MIN7 710 aa25.33■■□□□ 1.65
CDK4-208ENST00000551706 NCOA3Q9Y6Q9 1424 aa25.33■■□□□ 1.65
CDK4-208ENST00000551706 AHDC1Q5TGY3 1603 aaPredicted RBP25.33■■□□□ 1.65
CDK4-208ENST00000551706 DIP2AQ14689 1571 aa25.31■■□□□ 1.64
CDK4-208ENST00000551706 C14orf37Q86TY3 774 aa25.31■■□□□ 1.64
CDK4-208ENST00000551706 ADAMTS13Q76LX8 1427 aa25.3■■□□□ 1.64
CDK4-208ENST00000551706 SETBP1Q9Y6X0 1596 aa25.3■■□□□ 1.64
CDK4-208ENST00000551706 CADPS2Q86UW7 1296 aa25.28■■□□□ 1.64
CDK4-208ENST00000551706 PIK3R4Q99570 1358 aa25.28■■□□□ 1.64
CDK4-208ENST00000551706 NUTM2BA6NNL0 878 aaPredicted RBP25.27■■□□□ 1.64
CDK4-208ENST00000551706 NUTM2EB1AL46 878 aaPredicted RBP25.27■■□□□ 1.64
CDK4-208ENST00000551706 NUTM2AQ8IVF1 878 aaPredicted RBP25.27■■□□□ 1.64
CDK4-208ENST00000551706 ATF3P18847 181 aa25.26■■□□□ 1.63
CDK4-208ENST00000551706 C19orf44Q9H6X5 657 aa25.25■■□□□ 1.63
CDK4-208ENST00000551706 AFF2P51816 1311 aa25.25■■□□□ 1.63
CDK4-208ENST00000551706 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.25■■□□□ 1.63
CDK4-208ENST00000551706 PPLO60437 1756 aa25.24■■□□□ 1.63
CDK4-208ENST00000551706 NRXN3Q9Y4C0 1643 aa25.22■■□□□ 1.63
CDK4-208ENST00000551706 DHX57Q6P158 1386 aaKnown RBP25.21■■□□□ 1.63
CDK4-208ENST00000551706 BRINP3Q76B58 766 aa25.19■■□□□ 1.62
CDK4-208ENST00000551706 STAC3Q96MF2 364 aa25.19■■□□□ 1.62
CDK4-208ENST00000551706 PCGF6Q9BYE7 350 aa25.19■■□□□ 1.62
CDK4-208ENST00000551706 RGS12O14924 1447 aa25.19■■□□□ 1.62
CDK4-208ENST00000551706 ADGRF5Q8IZF2 1346 aa25.18■■□□□ 1.62
CDK4-208ENST00000551706 IFT172Q9UG01 1749 aa25.18■■□□□ 1.62
CDK4-208ENST00000551706 MYOM2P54296 1465 aa25.17■■□□□ 1.62
CDK4-208ENST00000551706 RBM6P78332 1123 aaKnown RBP25.17■■□□□ 1.62
CDK4-208ENST00000551706 QTRT2Q9H974 415 aaKnown RBP25.16■■□□□ 1.62
CDK4-208ENST00000551706 METP08581 1390 aa25.16■■□□□ 1.62
CDK4-208ENST00000551706 AMOTL2Q9Y2J4 779 aa25.15■■□□□ 1.62
CDK4-208ENST00000551706 PIK3C2GO75747 1445 aa25.14■■□□□ 1.62
CDK4-208ENST00000551706 PTPRUQ92729 1446 aa25.12■■□□□ 1.61
CDK4-208ENST00000551706 C8orf37Q96NL8 207 aa25.12■■□□□ 1.61
CDK4-208ENST00000551706 NRXN1Q9ULB1 1477 aa25.12■■□□□ 1.61
CDK4-208ENST00000551706 DCAF11Q8TEB1 546 aa25.11■■□□□ 1.61
CDK4-208ENST00000551706 ASXL1Q8IXJ9 1541 aa25.11■■□□□ 1.61
CDK4-208ENST00000551706 LRRC59Q96AG4 307 aaKnown RBP25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms