RNA–Protein interactions for RNA: ENST00000551317.5

EFCAB2-216, Transcript of EF-hand calcium binding domain 2, humanhuman

TSL 3

Gene EFCAB2, Length 520 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB2-216ENST00000551317 ERVK-7P63135 1459 aa11.08□□□□□ -0.64
EFCAB2-216ENST00000551317 CFAP65Q6ZU64 1925 aaKnown RBP11.08□□□□□ -0.64
EFCAB2-216ENST00000551317 WASHC2CQ9Y4E1 1318 aa11.07□□□□□ -0.64
EFCAB2-216ENST00000551317 TULP1O00294 542 aaPredicted RBP11.06□□□□□ -0.64
EFCAB2-216ENST00000551317 GGT6Q6P531 493 aa11.06□□□□□ -0.64
EFCAB2-216ENST00000551317 L3MBTL2Q969R5 705 aa11.06□□□□□ -0.64
EFCAB2-216ENST00000551317 MYO5BQ9ULV0 1848 aa11.06□□□□□ -0.64
EFCAB2-216ENST00000551317 C3P01024 1663 aa11.05□□□□□ -0.64
EFCAB2-216ENST00000551317 PRAG1Q86YV5 1406 aa11.05□□□□□ -0.64
EFCAB2-216ENST00000551317 TMEM131LA2VDJ0 1609 aa11.05□□□□□ -0.64
EFCAB2-216ENST00000551317 NRXN1Q9ULB1 1477 aa11.03□□□□□ -0.64
EFCAB2-216ENST00000551317 ADAMTSL3P82987 1691 aa11.03□□□□□ -0.64
EFCAB2-216ENST00000551317 IQGAP1P46940 1657 aa11.02□□□□□ -0.64
EFCAB2-216ENST00000551317 STAC3Q96MF2 364 aa11.02□□□□□ -0.65
EFCAB2-216ENST00000551317 NEXMIFQ5QGS0 1516 aa11.02□□□□□ -0.65
EFCAB2-216ENST00000551317 ZNF316A6NFI3 1004 aaPredicted RBP11.01□□□□□ -0.65
EFCAB2-216ENST00000551317 GPRASP1Q5JY77 1395 aa11.01□□□□□ -0.65
EFCAB2-216ENST00000551317 SETBP1Q9Y6X0 1596 aa10.99□□□□□ -0.65
EFCAB2-216ENST00000551317 RIMS1Q86UR5 1692 aaKnown RBP10.99□□□□□ -0.65
EFCAB2-216ENST00000551317 UBR1Q8IWV7 1749 aa10.99□□□□□ -0.65
EFCAB2-216ENST00000551317 VSIG10Q8N0Z9 540 aa10.99□□□□□ -0.65
EFCAB2-216ENST00000551317 MYO3AQ8NEV4 1616 aa10.98□□□□□ -0.65
EFCAB2-216ENST00000551317 ZNF142P52746 1687 aaPredicted RBP10.98□□□□□ -0.65
EFCAB2-216ENST00000551317 SLC52A1Q9NWF4 448 aa10.98□□□□□ -0.65
EFCAB2-216ENST00000551317 NBPF8Q3BBV2 869 aa10.97□□□□□ -0.65
EFCAB2-216ENST00000551317 ZFYVE9O95405 1425 aa10.97□□□□□ -0.65
EFCAB2-216ENST00000551317 NLRP1Q9C000 1473 aa10.97□□□□□ -0.65
EFCAB2-216ENST00000551317 PIK3C2GO75747 1445 aa10.96□□□□□ -0.65
EFCAB2-216ENST00000551317 ZMYM3Q14202 1370 aa10.96□□□□□ -0.65
EFCAB2-216ENST00000551317 RPGRIP1LQ68CZ1 1315 aa10.95□□□□□ -0.66
EFCAB2-216ENST00000551317 DCAF8L1A6NGE4 600 aa10.95□□□□□ -0.66
EFCAB2-216ENST00000551317 HOMEZQ8IX15 550 aa10.95□□□□□ -0.66
EFCAB2-216ENST00000551317 DCAF11Q8TEB1 546 aa10.95□□□□□ -0.66
EFCAB2-216ENST00000551317 SETD1AO15047 1707 aaKnown RBP10.95□□□□□ -0.66
EFCAB2-216ENST00000551317 ARID4BQ4LE39 1312 aaPredicted RBP10.94□□□□□ -0.66
EFCAB2-216ENST00000551317 A2ML1A8K2U0 1454 aa10.93□□□□□ -0.66
EFCAB2-216ENST00000551317 ROCK2O75116 1388 aaKnown RBP10.93□□□□□ -0.66
EFCAB2-216ENST00000551317 TNRQ92752 1358 aa10.93□□□□□ -0.66
EFCAB2-216ENST00000551317 ESF1Q9H501 851 aaKnown RBP10.93□□□□□ -0.66
EFCAB2-216ENST00000551317 USP47Q96K76 1375 aa10.92□□□□□ -0.66
EFCAB2-216ENST00000551317 ADGRB1O14514 1584 aa10.92□□□□□ -0.66
EFCAB2-216ENST00000551317 MLECQ14165 292 aa10.92□□□□□ -0.66
EFCAB2-216ENST00000551317 EIF4G2P78344 907 aaKnown RBP eCLIP10.91□□□□□ -0.66
EFCAB2-216ENST00000551317 RGL3Q3MIN7 710 aa10.91□□□□□ -0.66
EFCAB2-216ENST00000551317 ARHGEF28Q8N1W1 1705 aaKnown RBP10.91□□□□□ -0.66
EFCAB2-216ENST00000551317 NRXN3Q9Y4C0 1643 aa10.91□□□□□ -0.66
EFCAB2-216ENST00000551317 CEP170BQ9Y4F5 1589 aaPredicted RBP10.9□□□□□ -0.66
EFCAB2-216ENST00000551317 SCAF11Q99590 1463 aaKnown RBP10.9□□□□□ -0.66
EFCAB2-216ENST00000551317 IDI1Q13907 227 aa10.9□□□□□ -0.66
EFCAB2-216ENST00000551317 KNDC1Q76NI1 1749 aa10.89□□□□□ -0.67
EFCAB2-216ENST00000551317 SLIT1O75093 1534 aa10.89□□□□□ -0.67
EFCAB2-216ENST00000551317 RNF39Q9H2S5 420 aa10.89□□□□□ -0.67
EFCAB2-216ENST00000551317 ASXL1Q8IXJ9 1541 aa10.89□□□□□ -0.67
EFCAB2-216ENST00000551317 ZNF326Q5BKZ1 582 aaKnown RBP10.88□□□□□ -0.67
EFCAB2-216ENST00000551317 FBXO31Q5XUX0 539 aaPredicted RBP10.88□□□□□ -0.67
EFCAB2-216ENST00000551317 KDM2AQ9Y2K7 1162 aa10.88□□□□□ -0.67
EFCAB2-216ENST00000551317 SETD1BQ9UPS6 1966 aaKnown RBP10.88□□□□□ -0.67
EFCAB2-216ENST00000551317 ARHGAP23Q9P227 1491 aa10.87□□□□□ -0.67
EFCAB2-216ENST00000551317 HSPA5P11021 654 aaKnown RBP10.87□□□□□ -0.67
EFCAB2-216ENST00000551317 ERICH6Q7L0X2 663 aa10.87□□□□□ -0.67
EFCAB2-216ENST00000551317 QRICH2Q9H0J4 1663 aa10.87□□□□□ -0.67
EFCAB2-216ENST00000551317 EIF3AQ14152 1382 aaKnown RBP10.87□□□□□ -0.67
EFCAB2-216ENST00000551317 RIMS2Q9UQ26 1411 aa10.86□□□□□ -0.67
EFCAB2-216ENST00000551317 CNKSR2Q8WXI2 1034 aa10.86□□□□□ -0.67
EFCAB2-216ENST00000551317 CARD11Q9BXL7 1154 aa10.86□□□□□ -0.67
EFCAB2-216ENST00000551317 GTF3C3Q9Y5Q9 886 aa10.86□□□□□ -0.67
EFCAB2-216ENST00000551317 ALKQ9UM73 1620 aa10.86□□□□□ -0.67
EFCAB2-216ENST00000551317 DIP2AQ14689 1571 aa10.86□□□□□ -0.67
EFCAB2-216ENST00000551317 ADGRF5Q8IZF2 1346 aa10.85□□□□□ -0.67
EFCAB2-216ENST00000551317 SBNO2Q9Y2G9 1366 aa10.85□□□□□ -0.67
EFCAB2-216ENST00000551317 VGFO15240 615 aaPredicted RBP10.84□□□□□ -0.67
EFCAB2-216ENST00000551317 CHGAP10645 457 aaKnown RBP10.84□□□□□ -0.67
EFCAB2-216ENST00000551317 DLC1Q96QB1 1528 aa10.84□□□□□ -0.67
EFCAB2-216ENST00000551317 PTPRMP28827 1452 aa10.83□□□□□ -0.68
EFCAB2-216ENST00000551317 CCDC7Q96M83 1385 aa10.83□□□□□ -0.68
EFCAB2-216ENST00000551317 DIEXFQ68CQ4 756 aaKnown RBP10.83□□□□□ -0.68
EFCAB2-216ENST00000551317 MYOM1P52179 1685 aa10.82□□□□□ -0.68
EFCAB2-216ENST00000551317 TMEM2Q9UHN6 1383 aa10.82□□□□□ -0.68
EFCAB2-216ENST00000551317 CPS1P31327 1500 aa10.82□□□□□ -0.68
EFCAB2-216ENST00000551317 NBPF1Q3BBV0 1214 aa10.81□□□□□ -0.68
EFCAB2-216ENST00000551317 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.81□□□□□ -0.68
EFCAB2-216ENST00000551317 C14orf93Q9H972 538 aaKnown RBP10.81□□□□□ -0.68
EFCAB2-216ENST00000551317 WASHC2AQ641Q2 1341 aa10.81□□□□□ -0.68
EFCAB2-216ENST00000551317 STAG3Q9UJ98 1225 aa10.8□□□□□ -0.68
EFCAB2-216ENST00000551317 PLEKHG1Q9ULL1 1385 aa10.79□□□□□ -0.68
EFCAB2-216ENST00000551317 TECPR2O15040 1411 aa10.78□□□□□ -0.68
EFCAB2-216ENST00000551317 CFAP70Q5T0N1 1121 aa10.78□□□□□ -0.68
EFCAB2-216ENST00000551317 MED14O60244 1454 aa10.78□□□□□ -0.68
EFCAB2-216ENST00000551317 KIF7Q2M1P5 1343 aa10.78□□□□□ -0.68
EFCAB2-216ENST00000551317 XRN1Q8IZH2 1706 aaKnown RBP10.78□□□□□ -0.68
EFCAB2-216ENST00000551317 ST20-MTHFSA0A0A6YYL1 179 aa10.77□□□□□ -0.69
EFCAB2-216ENST00000551317 CEBPAP49715 358 aaPredicted RBP10.77□□□□□ -0.69
EFCAB2-216ENST00000551317 HDGFP51858 240 aaKnown RBP10.77□□□□□ -0.69
EFCAB2-216ENST00000551317 HIRIP3Q9BW71 556 aaPredicted RBP10.77□□□□□ -0.69
EFCAB2-216ENST00000551317 YTHDC2Q9H6S0 1430 aaKnown RBP10.76□□□□□ -0.69
EFCAB2-216ENST00000551317 TESK2Q96S53 571 aa10.76□□□□□ -0.69
EFCAB2-216ENST00000551317 ADGRB2O60241 1585 aa10.76□□□□□ -0.69
EFCAB2-216ENST00000551317 ADAMTS13Q76LX8 1427 aa10.75□□□□□ -0.69
EFCAB2-216ENST00000551317 C1QBPQ07021 282 aaKnown RBP10.75□□□□□ -0.69
EFCAB2-216ENST00000551317 TULP4Q9NRJ4 1543 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms