RNA–Protein interactions for RNA: ENST00000551179.1

CNOT2-229, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 355 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-229ENST00000551179 GLI2P10070 1586 aa13.96□□□□□ -0.18
CNOT2-229ENST00000551179 BCORL1Q5H9F3 1711 aa13.95□□□□□ -0.18
CNOT2-229ENST00000551179 MROH1Q8NDA8 1641 aa13.95□□□□□ -0.18
CNOT2-229ENST00000551179 ST20-MTHFSA0A0A6YYL1 179 aa13.95□□□□□ -0.18
CNOT2-229ENST00000551179 SLC24A1O60721 1099 aa13.95□□□□□ -0.18
CNOT2-229ENST00000551179 MADDQ8WXG6 1647 aa13.94□□□□□ -0.18
CNOT2-229ENST00000551179 C11orf95C9JLR9 678 aaPredicted RBP13.94□□□□□ -0.18
CNOT2-229ENST00000551179 TMF1P82094 1093 aa13.94□□□□□ -0.18
CNOT2-229ENST00000551179 HNRNPUQ00839 825 aaKnown RBP eCLIP13.94□□□□□ -0.18
CNOT2-229ENST00000551179 CDCA8Q53HL2 280 aa13.94□□□□□ -0.18
CNOT2-229ENST00000551179 ZNF692Q9BU19 519 aaPredicted RBP13.94□□□□□ -0.18
CNOT2-229ENST00000551179 MAP3K4Q9Y6R4 1608 aa13.93□□□□□ -0.18
CNOT2-229ENST00000551179 COL17A1Q9UMD9 1497 aaPredicted RBP13.93□□□□□ -0.18
CNOT2-229ENST00000551179 MYOM2P54296 1465 aa13.93□□□□□ -0.18
CNOT2-229ENST00000551179 KIF1BO60333 1816 aa13.92□□□□□ -0.18
CNOT2-229ENST00000551179 ZC3H13Q5T200 1668 aaKnown RBP13.91□□□□□ -0.18
CNOT2-229ENST00000551179 RIMBP3CA6NJZ7 1639 aa13.91□□□□□ -0.18
CNOT2-229ENST00000551179 RIMBP3BA6NNM3 1639 aa13.91□□□□□ -0.18
CNOT2-229ENST00000551179 ABCA6Q8N139 1617 aa13.91□□□□□ -0.18
CNOT2-229ENST00000551179 RIMBP3Q9UFD9 1639 aa13.91□□□□□ -0.18
CNOT2-229ENST00000551179 PPRC1Q5VV67 1664 aaKnown RBP13.91□□□□□ -0.18
CNOT2-229ENST00000551179 KIAA1210Q9ULL0 1709 aa13.9□□□□□ -0.18
CNOT2-229ENST00000551179 SPDYE4A6NLX3 237 aa13.9□□□□□ -0.18
CNOT2-229ENST00000551179 SCAF11Q99590 1463 aaKnown RBP13.9□□□□□ -0.18
CNOT2-229ENST00000551179 RALBP1Q15311 655 aa13.89□□□□□ -0.19
CNOT2-229ENST00000551179 DIP2CQ9Y2E4 1556 aa13.88□□□□□ -0.19
CNOT2-229ENST00000551179 FRMPD1Q5SYB0 1578 aa13.88□□□□□ -0.19
CNOT2-229ENST00000551179 CYB5RLQ6IPT4 315 aa13.87□□□□□ -0.19
CNOT2-229ENST00000551179 GGT6Q6P531 493 aa13.87□□□□□ -0.19
CNOT2-229ENST00000551179 WASHC2CQ9Y4E1 1318 aa13.87□□□□□ -0.19
CNOT2-229ENST00000551179 ABCC3O15438 1527 aa13.86□□□□□ -0.19
CNOT2-229ENST00000551179 IQGAP1P46940 1657 aa13.86□□□□□ -0.19
CNOT2-229ENST00000551179 FKBP8Q14318 412 aa13.86□□□□□ -0.19
CNOT2-229ENST00000551179 FAM9BQ8IZU0 186 aa13.86□□□□□ -0.19
CNOT2-229ENST00000551179 RICTORQ6R327 1708 aa13.86□□□□□ -0.19
CNOT2-229ENST00000551179 MYBBP1AQ9BQG0 1328 aaKnown RBP13.86□□□□□ -0.19
CNOT2-229ENST00000551179 CAMSAP1Q5T5Y3 1602 aa13.86□□□□□ -0.19
CNOT2-229ENST00000551179 ADGRB3O60242 1522 aa13.85□□□□□ -0.19
CNOT2-229ENST00000551179 NBPF1Q3BBV0 1214 aa13.85□□□□□ -0.19
CNOT2-229ENST00000551179 ZMYM4Q5VZL5 1548 aa13.85□□□□□ -0.19
CNOT2-229ENST00000551179 BRD4O60885 1362 aaPredicted RBP13.84□□□□□ -0.19
CNOT2-229ENST00000551179 DIP2BQ9P265 1576 aa13.84□□□□□ -0.19
CNOT2-229ENST00000551179 CHGAP10645 457 aaKnown RBP13.84□□□□□ -0.19
CNOT2-229ENST00000551179 TMC1Q8TDI8 760 aa13.84□□□□□ -0.19
CNOT2-229ENST00000551179 AKT1S1Q96B36 256 aa13.84□□□□□ -0.19
CNOT2-229ENST00000551179 SUPT16HQ9Y5B9 1047 aaKnown RBP13.84□□□□□ -0.19
CNOT2-229ENST00000551179 ZBED9Q6R2W3 1325 aa13.84□□□□□ -0.19
CNOT2-229ENST00000551179 RPGRIP1LQ68CZ1 1315 aa13.83□□□□□ -0.2
CNOT2-229ENST00000551179 NPATQ14207 1427 aa13.82□□□□□ -0.2
CNOT2-229ENST00000551179 FAM69CQ0P6D2 419 aa13.82□□□□□ -0.2
CNOT2-229ENST00000551179 SSUH2Q9Y2M2 353 aa13.82□□□□□ -0.2
CNOT2-229ENST00000551179 SYNMO15061 1565 aa13.81□□□□□ -0.2
CNOT2-229ENST00000551179 RAPGEF3O95398 923 aa13.81□□□□□ -0.2
CNOT2-229ENST00000551179 IFT172Q9UG01 1749 aa13.81□□□□□ -0.2
CNOT2-229ENST00000551179 ARHGAP31Q2M1Z3 1444 aa13.81□□□□□ -0.2
CNOT2-229ENST00000551179 CNGB1Q14028 1251 aaPredicted RBP13.8□□□□□ -0.2
CNOT2-229ENST00000551179 UGGT1Q9NYU2 1555 aa13.79□□□□□ -0.2
CNOT2-229ENST00000551179 SETBP1Q9Y6X0 1596 aa13.79□□□□□ -0.2
CNOT2-229ENST00000551179 MROH2AA6NES4 1674 aa13.79□□□□□ -0.2
CNOT2-229ENST00000551179 NLRP13Q86W25 1043 aa13.79□□□□□ -0.2
CNOT2-229ENST00000551179 DISP3Q9P2K9 1392 aa13.79□□□□□ -0.2
CNOT2-229ENST00000551179 KDM5AP29375 1690 aaKnown RBP13.79□□□□□ -0.2
CNOT2-229ENST00000551179 TESK2Q96S53 571 aa13.78□□□□□ -0.2
CNOT2-229ENST00000551179 NOS1P29475 1434 aa13.78□□□□□ -0.2
CNOT2-229ENST00000551179 REREQ9P2R6 1566 aa13.78□□□□□ -0.2
CNOT2-229ENST00000551179 NRXN1Q9ULB1 1477 aa13.77□□□□□ -0.21
CNOT2-229ENST00000551179 PARD3Q8TEW0 1356 aa13.76□□□□□ -0.21
CNOT2-229ENST00000551179 KNSTRNQ9Y448 316 aa13.76□□□□□ -0.21
CNOT2-229ENST00000551179 PPLO60437 1756 aa13.75□□□□□ -0.21
CNOT2-229ENST00000551179 MYO3AQ8NEV4 1616 aa13.75□□□□□ -0.21
CNOT2-229ENST00000551179 YEATS2Q9ULM3 1422 aa13.74□□□□□ -0.21
CNOT2-229ENST00000551179 VGFO15240 615 aaPredicted RBP13.74□□□□□ -0.21
CNOT2-229ENST00000551179 SLC52A1Q9NWF4 448 aa13.74□□□□□ -0.21
CNOT2-229ENST00000551179 PIK3C2BO00750 1634 aa13.74□□□□□ -0.21
CNOT2-229ENST00000551179 AGLP35573 1532 aa13.74□□□□□ -0.21
CNOT2-229ENST00000551179 SBNO2Q9Y2G9 1366 aa13.73□□□□□ -0.21
CNOT2-229ENST00000551179 CCDC184Q52MB2 194 aa13.73□□□□□ -0.21
CNOT2-229ENST00000551179 ERICH6BQ5W0A0 696 aa13.73□□□□□ -0.21
CNOT2-229ENST00000551179 PANK3Q9H999 370 aa13.73□□□□□ -0.21
CNOT2-229ENST00000551179 PIK3C2GO75747 1445 aa13.73□□□□□ -0.21
CNOT2-229ENST00000551179 ADGRF5Q8IZF2 1346 aa13.72□□□□□ -0.21
CNOT2-229ENST00000551179 CENPJQ9HC77 1338 aaPredicted RBP13.72□□□□□ -0.21
CNOT2-229ENST00000551179 CFAP70Q5T0N1 1121 aa13.72□□□□□ -0.21
CNOT2-229ENST00000551179 INSRP06213 1382 aa13.71□□□□□ -0.22
CNOT2-229ENST00000551179 ASXL1Q8IXJ9 1541 aa13.7□□□□□ -0.22
CNOT2-229ENST00000551179 ARHGEF40Q8TER5 1519 aa13.7□□□□□ -0.22
CNOT2-229ENST00000551179 TSPOAP1O95153 1857 aa13.7□□□□□ -0.22
CNOT2-229ENST00000551179 PREX1Q8TCU6 1659 aa13.7□□□□□ -0.22
CNOT2-229ENST00000551179 REM2Q8IYK8 340 aaPredicted RBP13.7□□□□□ -0.22
CNOT2-229ENST00000551179 ESF1Q9H501 851 aaKnown RBP13.7□□□□□ -0.22
CNOT2-229ENST00000551179 CC2D1BQ5T0F9 858 aaKnown RBP13.69□□□□□ -0.22
CNOT2-229ENST00000551179 STAG3Q9UJ98 1225 aa13.69□□□□□ -0.22
CNOT2-229ENST00000551179 SMG6Q86US8 1419 aaKnown RBP13.68□□□□□ -0.22
CNOT2-229ENST00000551179 PNISRQ8TF01 805 aaKnown RBP13.68□□□□□ -0.22
CNOT2-229ENST00000551179 NEXMIFQ5QGS0 1516 aa13.68□□□□□ -0.22
CNOT2-229ENST00000551179 LRPPRCP42704 1394 aaKnown RBP13.68□□□□□ -0.22
CNOT2-229ENST00000551179 NPC1L1Q9UHC9 1359 aa13.68□□□□□ -0.22
CNOT2-229ENST00000551179 BCANQ96GW7 911 aa13.67□□□□□ -0.22
CNOT2-229ENST00000551179 C14orf93Q9H972 538 aaKnown RBP13.67□□□□□ -0.22
CNOT2-229ENST00000551179 NUDCQ9Y266 331 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms