RNA–Protein interactions for RNA: ENST00000550715.5

LETMD1-225, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 907 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-225ENST00000550715 TULP1O00294 542 aaPredicted RBP13.24□□□□□ -0.29
LETMD1-225ENST00000550715 SP7Q8TDD2 431 aaPredicted RBP13.24□□□□□ -0.29
LETMD1-225ENST00000550715 EMILIN3Q9NT22 766 aa13.24□□□□□ -0.29
LETMD1-225ENST00000550715 FOXK1P85037 733 aa13.23□□□□□ -0.29
LETMD1-225ENST00000550715 ARIH1Q9Y4X5 557 aaPredicted RBP13.23□□□□□ -0.29
LETMD1-225ENST00000550715 DPYSL4O14531 572 aa13.22□□□□□ -0.29
LETMD1-225ENST00000550715 PLPP6Q8IY26 295 aa13.22□□□□□ -0.29
LETMD1-225ENST00000550715 RGS17Q9UGC6 210 aaPredicted RBP13.22□□□□□ -0.29
LETMD1-225ENST00000550715 ARHGEF12Q9NZN5 1544 aa13.22□□□□□ -0.29
LETMD1-225ENST00000550715 RICTORQ6R327 1708 aa13.22□□□□□ -0.29
LETMD1-225ENST00000550715 KIF3CO14782 793 aa13.21□□□□□ -0.29
LETMD1-225ENST00000550715 C7P10643 843 aa13.21□□□□□ -0.29
LETMD1-225ENST00000550715 TMEM92Q6UXU6 159 aa13.21□□□□□ -0.29
LETMD1-225ENST00000550715 SUPT5HO00267 1087 aaKnown RBP13.2□□□□□ -0.3
LETMD1-225ENST00000550715 ZFYVE16Q7Z3T8 1539 aa13.19□□□□□ -0.3
LETMD1-225ENST00000550715 NCOA1Q15788 1441 aa13.19□□□□□ -0.3
LETMD1-225ENST00000550715 MLLT3P42568 568 aaPredicted RBP13.15□□□□□ -0.3
LETMD1-225ENST00000550715 EFCAB5A4FU69 1503 aa13.14□□□□□ -0.31
LETMD1-225ENST00000550715 ZMYM4Q5VZL5 1548 aa13.14□□□□□ -0.31
LETMD1-225ENST00000550715 TOM1O60784 492 aa13.14□□□□□ -0.31
LETMD1-225ENST00000550715 ATP10AO60312 1499 aa13.14□□□□□ -0.31
LETMD1-225ENST00000550715 MAGI2Q86UL8 1455 aa13.14□□□□□ -0.31
LETMD1-225ENST00000550715 RAPGEF2Q9Y4G8 1499 aa13.14□□□□□ -0.31
LETMD1-225ENST00000550715 C3orf67Q6ZVT6 689 aa13.13□□□□□ -0.31
LETMD1-225ENST00000550715 UPF1Q92900 1129 aaKnown RBP eCLIP13.13□□□□□ -0.31
LETMD1-225ENST00000550715 HECW1Q76N89 1606 aa13.13□□□□□ -0.31
LETMD1-225ENST00000550715 GOLGA3Q08378 1498 aa13.12□□□□□ -0.31
LETMD1-225ENST00000550715 PDIA6Q15084 440 aa13.11□□□□□ -0.31
LETMD1-225ENST00000550715 SMYD5Q6GMV2 418 aa13.11□□□□□ -0.31
LETMD1-225ENST00000550715 TRAPPC8Q9Y2L5 1435 aa13.11□□□□□ -0.31
LETMD1-225ENST00000550715 POTEAQ6S8J7 498 aa13.1□□□□□ -0.31
LETMD1-225ENST00000550715 ZC3H15Q8WU90 426 aaKnown RBP13.09□□□□□ -0.31
LETMD1-225ENST00000550715 CAMSAP1Q5T5Y3 1602 aa13.09□□□□□ -0.31
LETMD1-225ENST00000550715 C9orf84Q5VXU9 1444 aa13.07□□□□□ -0.32
LETMD1-225ENST00000550715 SCAPERQ9BY12 1400 aa13.07□□□□□ -0.32
LETMD1-225ENST00000550715 SPDYE16A6NNV3 312 aaPredicted RBP13.07□□□□□ -0.32
LETMD1-225ENST00000550715 FAM9AQ8IZU1 332 aaPredicted RBP13.07□□□□□ -0.32
LETMD1-225ENST00000550715 C3P01024 1663 aa13.06□□□□□ -0.32
LETMD1-225ENST00000550715 MAP3K9P80192 1104 aa13.06□□□□□ -0.32
LETMD1-225ENST00000550715 RBM26Q5T8P6 1007 aaKnown RBP13.06□□□□□ -0.32
LETMD1-225ENST00000550715 PLEKHD1A6NEE1 506 aa13.05□□□□□ -0.32
LETMD1-225ENST00000550715 ESF1Q9H501 851 aaKnown RBP13.03□□□□□ -0.32
LETMD1-225ENST00000550715 OXER1Q8TDS5 423 aa13.02□□□□□ -0.33
LETMD1-225ENST00000550715 SRCAPQ6ZRS2 3230 aa13.02□□□□□ -0.33
LETMD1-225ENST00000550715 AFAP1Q8N556 730 aa13.01□□□□□ -0.33
LETMD1-225ENST00000550715 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13□□□□□ -0.33
LETMD1-225ENST00000550715 EIF2AK3Q9NZJ5 1116 aaKnown RBP13□□□□□ -0.33
LETMD1-225ENST00000550715 ALKQ9UM73 1620 aa12.99□□□□□ -0.33
LETMD1-225ENST00000550715 GRXCR2A6NFK2 248 aa12.98□□□□□ -0.33
LETMD1-225ENST00000550715 GPIHBP1Q8IV16 184 aa12.98□□□□□ -0.33
LETMD1-225ENST00000550715 MYT1LQ9UL68 1186 aa12.98□□□□□ -0.33
LETMD1-225ENST00000550715 CFAP74Q9C0B2 1584 aa12.98□□□□□ -0.33
LETMD1-225ENST00000550715 CTTNBP2Q8WZ74 1663 aa12.97□□□□□ -0.33
LETMD1-225ENST00000550715 SLC24A3Q9HC58 644 aa12.96□□□□□ -0.33
LETMD1-225ENST00000550715 TCOF1Q13428 1488 aaKnown RBP12.96□□□□□ -0.34
LETMD1-225ENST00000550715 NUP153P49790 1475 aaKnown RBP12.95□□□□□ -0.34
LETMD1-225ENST00000550715 RAPGEF6Q8TEU7 1601 aa12.94□□□□□ -0.34
LETMD1-225ENST00000550715 PTPRKQ15262 1439 aa12.94□□□□□ -0.34
LETMD1-225ENST00000550715 ZMYM3Q14202 1370 aa12.94□□□□□ -0.34
LETMD1-225ENST00000550715 PLA2R1Q13018 1463 aa12.93□□□□□ -0.34
LETMD1-225ENST00000550715 SHANK2Q9UPX8 1470 aa12.93□□□□□ -0.34
LETMD1-225ENST00000550715 EVI5O60447 810 aa12.93□□□□□ -0.34
LETMD1-225ENST00000550715 ZMYND10O75800 440 aa12.93□□□□□ -0.34
LETMD1-225ENST00000550715 EFCAB2Q5VUJ9 269 aa12.93□□□□□ -0.34
LETMD1-225ENST00000550715 DDX12PQ92771 950 aa12.93□□□□□ -0.34
LETMD1-225ENST00000550715 PLCH2O75038 1416 aa12.93□□□□□ -0.34
LETMD1-225ENST00000550715 TBC1D12O60347 775 aa12.92□□□□□ -0.34
LETMD1-225ENST00000550715 NPATQ14207 1427 aa12.92□□□□□ -0.34
LETMD1-225ENST00000550715 CPS1P31327 1500 aa12.91□□□□□ -0.34
LETMD1-225ENST00000550715 SETD1AO15047 1707 aaKnown RBP12.91□□□□□ -0.34
LETMD1-225ENST00000550715 PTCD2Q8WV60 388 aaKnown RBP12.9□□□□□ -0.34
LETMD1-225ENST00000550715 POTEJP0CG39 1038 aa12.89□□□□□ -0.35
LETMD1-225ENST00000550715 CNTLNQ9NXG0 1405 aa12.88□□□□□ -0.35
LETMD1-225ENST00000550715 AGLP35573 1532 aa12.88□□□□□ -0.35
LETMD1-225ENST00000550715 DIP2CQ9Y2E4 1556 aa12.88□□□□□ -0.35
LETMD1-225ENST00000550715 ZNF316A6NFI3 1004 aaPredicted RBP12.87□□□□□ -0.35
LETMD1-225ENST00000550715 POTEB2H3BUK9 544 aa12.87□□□□□ -0.35
LETMD1-225ENST00000550715 BARGINQ6ZT62 677 aa12.87□□□□□ -0.35
LETMD1-225ENST00000550715 NUTM2FA1L443 756 aa12.86□□□□□ -0.35
LETMD1-225ENST00000550715 SLC34A2O95436 690 aa12.86□□□□□ -0.35
LETMD1-225ENST00000550715 OSBPP22059 807 aa12.86□□□□□ -0.35
LETMD1-225ENST00000550715 ZNF518AQ6AHZ1 1483 aa12.85□□□□□ -0.35
LETMD1-225ENST00000550715 PTGER2P43116 358 aa12.85□□□□□ -0.35
LETMD1-225ENST00000550715 GPR37O15354 613 aa12.84□□□□□ -0.35
LETMD1-225ENST00000550715 PRIM1P49642 420 aaKnown RBP12.84□□□□□ -0.35
LETMD1-225ENST00000550715 REREQ9P2R6 1566 aa12.84□□□□□ -0.35
LETMD1-225ENST00000550715 SUPT6HQ7KZ85 1726 aaKnown RBP12.83□□□□□ -0.36
LETMD1-225ENST00000550715 CEP170BQ9Y4F5 1589 aaPredicted RBP12.83□□□□□ -0.36
LETMD1-225ENST00000550715 RANGAP1P46060 587 aaPredicted RBP12.83□□□□□ -0.36
LETMD1-225ENST00000550715 BRPF1P55201 1214 aaPredicted RBP12.83□□□□□ -0.36
LETMD1-225ENST00000550715 PCDHGA4Q9Y5G9 962 aa12.83□□□□□ -0.36
LETMD1-225ENST00000550715 KDM5CP41229 1560 aa12.82□□□□□ -0.36
LETMD1-225ENST00000550715 ABCA6Q8N139 1617 aa12.82□□□□□ -0.36
LETMD1-225ENST00000550715 KRI1Q8N9T8 703 aaKnown RBP12.82□□□□□ -0.36
LETMD1-225ENST00000550715 NEUROD2Q15784 382 aa12.81□□□□□ -0.36
LETMD1-225ENST00000550715 VWDEQ8N2E2 1590 aa12.81□□□□□ -0.36
LETMD1-225ENST00000550715 MYO3AQ8NEV4 1616 aa12.8□□□□□ -0.36
LETMD1-225ENST00000550715 ZNF142P52746 1687 aaPredicted RBP12.8□□□□□ -0.36
LETMD1-225ENST00000550715 MLH3Q9UHC1 1453 aa12.8□□□□□ -0.36
LETMD1-225ENST00000550715 SLAIN1Q8ND83 568 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms