RNA–Protein interactions for RNA: ENST00000550100.5

LETMD1-221, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 1,480 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-221ENST00000550100 FOXD1Q16676 465 aa17.77■□□□□ 0.44
LETMD1-221ENST00000550100 LRRC7Q96NW7 1537 aa17.77■□□□□ 0.44
LETMD1-221ENST00000550100 SPHKAPQ2M3C7 1700 aa17.77■□□□□ 0.43
LETMD1-221ENST00000550100 ALKQ9UM73 1620 aa17.76■□□□□ 0.43
LETMD1-221ENST00000550100 SLC4A1APQ9BWU0 796 aaKnown RBP17.75■□□□□ 0.43
LETMD1-221ENST00000550100 CLTCL1P53675 1640 aa17.74■□□□□ 0.43
LETMD1-221ENST00000550100 PLEKHG1Q9ULL1 1385 aa17.73■□□□□ 0.43
LETMD1-221ENST00000550100 RBM33Q96EV2 1170 aaKnown RBP17.73■□□□□ 0.43
LETMD1-221ENST00000550100 XIRP1Q702N8 1843 aaKnown RBP17.71■□□□□ 0.43
LETMD1-221ENST00000550100 KCNA6P17658 529 aa17.71■□□□□ 0.43
LETMD1-221ENST00000550100 BCANQ96GW7 911 aa17.71■□□□□ 0.43
LETMD1-221ENST00000550100 TRPM2O94759 1503 aa17.71■□□□□ 0.43
LETMD1-221ENST00000550100 ADAMTS13Q76LX8 1427 aa17.7■□□□□ 0.42
LETMD1-221ENST00000550100 PPP1R15AO75807 674 aaPredicted RBP17.7■□□□□ 0.42
LETMD1-221ENST00000550100 PIP4K2BP78356 416 aa17.69■□□□□ 0.42
LETMD1-221ENST00000550100 MPHOSPH9Q99550 1183 aa17.69■□□□□ 0.42
LETMD1-221ENST00000550100 SETD5Q9C0A6 1442 aa17.69■□□□□ 0.42
LETMD1-221ENST00000550100 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.69■□□□□ 0.42
LETMD1-221ENST00000550100 HDGFP51858 240 aaKnown RBP17.67■□□□□ 0.42
LETMD1-221ENST00000550100 TBX22Q9Y458 520 aa17.67■□□□□ 0.42
LETMD1-221ENST00000550100 ZNF326Q5BKZ1 582 aaKnown RBP17.66■□□□□ 0.42
LETMD1-221ENST00000550100 TOM1O60784 492 aa17.65■□□□□ 0.42
LETMD1-221ENST00000550100 TMEM94Q12767 1356 aa17.65■□□□□ 0.42
LETMD1-221ENST00000550100 CHD2O14647 1828 aaKnown RBP17.65■□□□□ 0.42
LETMD1-221ENST00000550100 PROSER2Q86WR7 435 aaPredicted RBP17.64■□□□□ 0.41
LETMD1-221ENST00000550100 RAB3GAP2Q9H2M9 1393 aa17.64■□□□□ 0.41
LETMD1-221ENST00000550100 HSPA1LP34931 641 aa17.63■□□□□ 0.41
LETMD1-221ENST00000550100 NWD1Q149M9 1564 aa17.63■□□□□ 0.41
LETMD1-221ENST00000550100 NEXMIFQ5QGS0 1516 aa17.63■□□□□ 0.41
LETMD1-221ENST00000550100 PTPRUQ92729 1446 aa17.63■□□□□ 0.41
LETMD1-221ENST00000550100 SCAF1Q9H7N4 1312 aaKnown RBP17.63■□□□□ 0.41
LETMD1-221ENST00000550100 NRXN3Q9Y4C0 1643 aa17.63■□□□□ 0.41
LETMD1-221ENST00000550100 KIF1BO60333 1816 aa17.62■□□□□ 0.41
LETMD1-221ENST00000550100 METP08581 1390 aa17.59■□□□□ 0.41
LETMD1-221ENST00000550100 SETBP1Q9Y6X0 1596 aa17.58■□□□□ 0.41
LETMD1-221ENST00000550100 NKTRP30414 1462 aaKnown RBP17.57■□□□□ 0.4
LETMD1-221ENST00000550100 AMOTL2Q9Y2J4 779 aa17.57■□□□□ 0.4
LETMD1-221ENST00000550100 DIP2AQ14689 1571 aa17.56■□□□□ 0.4
LETMD1-221ENST00000550100 SPATA31E1Q6ZUB1 1445 aa17.56■□□□□ 0.4
LETMD1-221ENST00000550100 RGL3Q3MIN7 710 aa17.56■□□□□ 0.4
LETMD1-221ENST00000550100 PIK3R4Q99570 1358 aa17.55■□□□□ 0.4
LETMD1-221ENST00000550100 CCDC144AA2RUR9 1427 aa17.53■□□□□ 0.4
LETMD1-221ENST00000550100 PPLO60437 1756 aa17.53■□□□□ 0.4
LETMD1-221ENST00000550100 RPGRIP1LQ68CZ1 1315 aa17.53■□□□□ 0.4
LETMD1-221ENST00000550100 ADGRF5Q8IZF2 1346 aa17.53■□□□□ 0.4
LETMD1-221ENST00000550100 VGFO15240 615 aaPredicted RBP17.51■□□□□ 0.39
LETMD1-221ENST00000550100 XRN1Q8IZH2 1706 aaKnown RBP17.51■□□□□ 0.39
LETMD1-221ENST00000550100 SETD1AO15047 1707 aaKnown RBP17.5■□□□□ 0.39
LETMD1-221ENST00000550100 HRCP23327 699 aa17.5■□□□□ 0.39
LETMD1-221ENST00000550100 ANKRD30BQ9BXX2 1392 aa17.49■□□□□ 0.39
LETMD1-221ENST00000550100 FAM135BQ49AJ0 1406 aa17.49■□□□□ 0.39
LETMD1-221ENST00000550100 MSH6P52701 1360 aa17.48■□□□□ 0.39
LETMD1-221ENST00000550100 SLAIN2Q9P270 581 aa17.48■□□□□ 0.39
LETMD1-221ENST00000550100 ACIN1Q9UKV3 1341 aaKnown RBP17.47■□□□□ 0.39
LETMD1-221ENST00000550100 NCOA3Q9Y6Q9 1424 aa17.46■□□□□ 0.39
LETMD1-221ENST00000550100 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.46■□□□□ 0.39
LETMD1-221ENST00000550100 DISP3Q9P2K9 1392 aa17.46■□□□□ 0.39
LETMD1-221ENST00000550100 IFT172Q9UG01 1749 aa17.46■□□□□ 0.38
LETMD1-221ENST00000550100 C14orf37Q86TY3 774 aa17.45■□□□□ 0.38
LETMD1-221ENST00000550100 C19orf44Q9H6X5 657 aa17.45■□□□□ 0.38
LETMD1-221ENST00000550100 ROBO1Q9Y6N7 1651 aa17.44■□□□□ 0.38
LETMD1-221ENST00000550100 ROBO2Q9HCK4 1378 aa17.44■□□□□ 0.38
LETMD1-221ENST00000550100 ILDR2Q71H61 639 aa17.44■□□□□ 0.38
LETMD1-221ENST00000550100 TMEM132EQ6IEE7 984 aa17.42■□□□□ 0.38
LETMD1-221ENST00000550100 ASXL1Q8IXJ9 1541 aa17.4■□□□□ 0.38
LETMD1-221ENST00000550100 PIK3C2GO75747 1445 aa17.39■□□□□ 0.38
LETMD1-221ENST00000550100 ATF3P18847 181 aa17.39■□□□□ 0.37
LETMD1-221ENST00000550100 CADPS2Q86UW7 1296 aa17.38■□□□□ 0.37
LETMD1-221ENST00000550100 CFAP70Q5T0N1 1121 aa17.37■□□□□ 0.37
LETMD1-221ENST00000550100 STK26Q9P289 416 aa17.37■□□□□ 0.37
LETMD1-221ENST00000550100 NRXN1Q9ULB1 1477 aa17.37■□□□□ 0.37
LETMD1-221ENST00000550100 NALCNQ8IZF0 1738 aa17.37■□□□□ 0.37
LETMD1-221ENST00000550100 MED1Q15648 1581 aaPredicted RBP17.37■□□□□ 0.37
LETMD1-221ENST00000550100 BRINP3Q76B58 766 aa17.37■□□□□ 0.37
LETMD1-221ENST00000550100 C14orf93Q9H972 538 aaKnown RBP17.37■□□□□ 0.37
LETMD1-221ENST00000550100 PTCH1Q13635 1447 aa17.36■□□□□ 0.37
LETMD1-221ENST00000550100 ADGRL3Q9HAR2 1447 aa17.36■□□□□ 0.37
LETMD1-221ENST00000550100 WAPLQ7Z5K2 1190 aa17.36■□□□□ 0.37
LETMD1-221ENST00000550100 MST1RQ04912 1400 aa17.36■□□□□ 0.37
LETMD1-221ENST00000550100 PRAG1Q86YV5 1406 aa17.36■□□□□ 0.37
LETMD1-221ENST00000550100 DHX57Q6P158 1386 aaKnown RBP17.35■□□□□ 0.37
LETMD1-221ENST00000550100 PLEKHH1Q9ULM0 1364 aa17.35■□□□□ 0.37
LETMD1-221ENST00000550100 DCCP43146 1447 aa17.34■□□□□ 0.37
LETMD1-221ENST00000550100 KDM2AQ9Y2K7 1162 aa17.34■□□□□ 0.37
LETMD1-221ENST00000550100 LRPPRCP42704 1394 aaKnown RBP17.34■□□□□ 0.37
LETMD1-221ENST00000550100 DDX17Q92841 729 aaKnown RBP17.33■□□□□ 0.37
LETMD1-221ENST00000550100 MYOM2P54296 1465 aa17.33■□□□□ 0.36
LETMD1-221ENST00000550100 DCAF11Q8TEB1 546 aa17.32■□□□□ 0.36
LETMD1-221ENST00000550100 PHLPP1O60346 1717 aa17.32■□□□□ 0.36
LETMD1-221ENST00000550100 ABCC11Q96J66 1382 aa17.31■□□□□ 0.36
LETMD1-221ENST00000550100 COL16A1Q07092 1604 aaPredicted RBP17.31■□□□□ 0.36
LETMD1-221ENST00000550100 TECPR2O15040 1411 aa17.3■□□□□ 0.36
LETMD1-221ENST00000550100 YTHDC2Q9H6S0 1430 aaKnown RBP17.3■□□□□ 0.36
LETMD1-221ENST00000550100 RGS17Q9UGC6 210 aaPredicted RBP17.3■□□□□ 0.36
LETMD1-221ENST00000550100 ORAI2Q96SN7 254 aa17.29■□□□□ 0.36
LETMD1-221ENST00000550100 C1orf167Q5SNV9 1468 aa17.28■□□□□ 0.36
LETMD1-221ENST00000550100 AHDC1Q5TGY3 1603 aaPredicted RBP17.27■□□□□ 0.36
LETMD1-221ENST00000550100 SIN3AQ96ST3 1273 aa17.25■□□□□ 0.35
LETMD1-221ENST00000550100 KNDC1Q76NI1 1749 aa17.25■□□□□ 0.35
LETMD1-221ENST00000550100 ADGRB1O14514 1584 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms