RNA–Protein interactions for RNA: ENST00000548140.1

HECTD4-206, Transcript of HECT domain E3 ubiquitin protein ligase 4, humanhuman

TSL 3

Gene HECTD4, Length 1,426 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HECTD4-206ENST00000548140 NUTM2DQ5VT03 806 aaPredicted RBP23.39■■□□□ 1.33
HECTD4-206ENST00000548140 RIMS2Q9UQ26 1411 aa23.38■■□□□ 1.33
HECTD4-206ENST00000548140 TMEM2Q9UHN6 1383 aa23.37■■□□□ 1.33
HECTD4-206ENST00000548140 STAC3Q96MF2 364 aa23.37■■□□□ 1.33
HECTD4-206ENST00000548140 NEXMIFQ5QGS0 1516 aa23.37■■□□□ 1.33
HECTD4-206ENST00000548140 HDGFP51858 240 aaKnown RBP23.36■■□□□ 1.33
HECTD4-206ENST00000548140 PPLO60437 1756 aa23.36■■□□□ 1.33
HECTD4-206ENST00000548140 VGFO15240 615 aaPredicted RBP23.35■■□□□ 1.33
HECTD4-206ENST00000548140 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.35■■□□□ 1.33
HECTD4-206ENST00000548140 IFT172Q9UG01 1749 aa23.35■■□□□ 1.33
HECTD4-206ENST00000548140 ZFYVE9O95405 1425 aa23.34■■□□□ 1.33
HECTD4-206ENST00000548140 ADGRF5Q8IZF2 1346 aa23.33■■□□□ 1.33
HECTD4-206ENST00000548140 MYOM2P54296 1465 aa23.33■■□□□ 1.32
HECTD4-206ENST00000548140 SLIT1O75093 1534 aa23.32■■□□□ 1.32
HECTD4-206ENST00000548140 NBPF8Q3BBV2 869 aa23.32■■□□□ 1.32
HECTD4-206ENST00000548140 EID1Q9Y6B2 187 aa23.32■■□□□ 1.32
HECTD4-206ENST00000548140 ARHGAP23Q9P227 1491 aa23.31■■□□□ 1.32
HECTD4-206ENST00000548140 TXNDC2Q86VQ3 553 aa23.31■■□□□ 1.32
HECTD4-206ENST00000548140 PRAG1Q86YV5 1406 aa23.3■■□□□ 1.32
HECTD4-206ENST00000548140 LTKP29376 864 aa23.29■■□□□ 1.32
HECTD4-206ENST00000548140 SENP3Q9H4L4 574 aaPredicted RBP23.29■■□□□ 1.32
HECTD4-206ENST00000548140 ANKLE2Q86XL3 938 aa23.27■■□□□ 1.32
HECTD4-206ENST00000548140 LMTK3Q96Q04 1460 aa23.27■■□□□ 1.32
HECTD4-206ENST00000548140 NRXN1Q9ULB1 1477 aa23.26■■□□□ 1.31
HECTD4-206ENST00000548140 HSPA2P54652 639 aa23.26■■□□□ 1.31
HECTD4-206ENST00000548140 BCANQ96GW7 911 aa23.25■■□□□ 1.31
HECTD4-206ENST00000548140 SCAF11Q99590 1463 aaKnown RBP23.24■■□□□ 1.31
HECTD4-206ENST00000548140 PIK3C2GO75747 1445 aa23.24■■□□□ 1.31
HECTD4-206ENST00000548140 PLEKHG1Q9ULL1 1385 aa23.21■■□□□ 1.31
HECTD4-206ENST00000548140 CFAP70Q5T0N1 1121 aa23.21■■□□□ 1.31
HECTD4-206ENST00000548140 NCKAP5LQ9HCH0 1330 aa23.19■■□□□ 1.3
HECTD4-206ENST00000548140 C14orf93Q9H972 538 aaKnown RBP23.19■■□□□ 1.3
HECTD4-206ENST00000548140 TRPM1Q7Z4N2 1603 aa23.18■■□□□ 1.3
HECTD4-206ENST00000548140 NBPF1Q3BBV0 1214 aa23.17■■□□□ 1.3
HECTD4-206ENST00000548140 ROCK2O75116 1388 aaKnown RBP23.17■■□□□ 1.3
HECTD4-206ENST00000548140 RALGAPBQ86X10 1494 aa23.17■■□□□ 1.3
HECTD4-206ENST00000548140 SETBP1Q9Y6X0 1596 aa23.15■■□□□ 1.3
HECTD4-206ENST00000548140 POLR1AO95602 1720 aaPredicted RBP23.14■■□□□ 1.29
HECTD4-206ENST00000548140 KIAA1210Q9ULL0 1709 aa23.14■■□□□ 1.29
HECTD4-206ENST00000548140 ALKQ9UM73 1620 aa23.14■■□□□ 1.29
HECTD4-206ENST00000548140 IQGAP1P46940 1657 aa23.14■■□□□ 1.29
HECTD4-206ENST00000548140 NRXN3Q9Y4C0 1643 aa23.13■■□□□ 1.29
HECTD4-206ENST00000548140 SLC26A8Q96RN1 970 aa23.13■■□□□ 1.29
HECTD4-206ENST00000548140 CARD11Q9BXL7 1154 aa23.13■■□□□ 1.29
HECTD4-206ENST00000548140 NPHP4O75161 1426 aaPredicted RBP23.13■■□□□ 1.29
HECTD4-206ENST00000548140 LAMC1P11047 1609 aa23.12■■□□□ 1.29
HECTD4-206ENST00000548140 MED14O60244 1454 aa23.12■■□□□ 1.29
HECTD4-206ENST00000548140 ADAMTS13Q76LX8 1427 aa23.11■■□□□ 1.29
HECTD4-206ENST00000548140 TMEM132EQ6IEE7 984 aa23.11■■□□□ 1.29
HECTD4-206ENST00000548140 TBX22Q9Y458 520 aa23.09■■□□□ 1.29
HECTD4-206ENST00000548140 GPRASP1Q5JY77 1395 aa23.09■■□□□ 1.29
HECTD4-206ENST00000548140 METP08581 1390 aa23.06■■□□□ 1.28
HECTD4-206ENST00000548140 ADGRB1O14514 1584 aa23.06■■□□□ 1.28
HECTD4-206ENST00000548140 DIP2AQ14689 1571 aa23.06■■□□□ 1.28
HECTD4-206ENST00000548140 SETD1AO15047 1707 aaKnown RBP23.06■■□□□ 1.28
HECTD4-206ENST00000548140 ASXL1Q8IXJ9 1541 aa23.06■■□□□ 1.28
HECTD4-206ENST00000548140 STRCQ7RTU9 1775 aa23.05■■□□□ 1.28
HECTD4-206ENST00000548140 STK26Q9P289 416 aa23.04■■□□□ 1.28
HECTD4-206ENST00000548140 EIF4G2P78344 907 aaKnown RBP eCLIP23.02■■□□□ 1.28
HECTD4-206ENST00000548140 YTHDC2Q9H6S0 1430 aaKnown RBP23.02■■□□□ 1.28
HECTD4-206ENST00000548140 TRAK1Q9UPV9 953 aa23.01■■□□□ 1.27
HECTD4-206ENST00000548140 USP47Q96K76 1375 aa23.01■■□□□ 1.27
HECTD4-206ENST00000548140 LRPPRCP42704 1394 aaKnown RBP23■■□□□ 1.27
HECTD4-206ENST00000548140 HSPA5P11021 654 aaKnown RBP22.99■■□□□ 1.27
HECTD4-206ENST00000548140 DMRT2Q9Y5R5 561 aa22.98■■□□□ 1.27
HECTD4-206ENST00000548140 PIK3R4Q99570 1358 aa22.97■■□□□ 1.27
HECTD4-206ENST00000548140 PTPRUQ92729 1446 aa22.97■■□□□ 1.27
HECTD4-206ENST00000548140 AMOTL2Q9Y2J4 779 aa22.97■■□□□ 1.27
HECTD4-206ENST00000548140 HIRIP3Q9BW71 556 aaPredicted RBP22.96■■□□□ 1.27
HECTD4-206ENST00000548140 EIF3AQ14152 1382 aaKnown RBP22.96■■□□□ 1.27
HECTD4-206ENST00000548140 ABCC11Q96J66 1382 aa22.96■■□□□ 1.27
HECTD4-206ENST00000548140 ST20-MTHFSA0A0A6YYL1 179 aa22.94■■□□□ 1.26
HECTD4-206ENST00000548140 KCNA6P17658 529 aa22.91■■□□□ 1.26
HECTD4-206ENST00000548140 CHD2O14647 1828 aaKnown RBP22.91■■□□□ 1.26
HECTD4-206ENST00000548140 PRAM1Q96QH2 718 aa22.91■■□□□ 1.26
HECTD4-206ENST00000548140 POGKQ9P215 609 aa22.91■■□□□ 1.26
HECTD4-206ENST00000548140 TECPR2O15040 1411 aa22.9■■□□□ 1.26
HECTD4-206ENST00000548140 CENPJQ9HC77 1338 aaPredicted RBP22.9■■□□□ 1.26
HECTD4-206ENST00000548140 DLC1Q96QB1 1528 aa22.9■■□□□ 1.26
HECTD4-206ENST00000548140 KNDC1Q76NI1 1749 aa22.9■■□□□ 1.26
HECTD4-206ENST00000548140 ARHGEF28Q8N1W1 1705 aaKnown RBP22.9■■□□□ 1.26
HECTD4-206ENST00000548140 SAFB2Q14151 953 aaKnown RBP eCLIP22.89■■□□□ 1.25
HECTD4-206ENST00000548140 WAPLQ7Z5K2 1190 aa22.89■■□□□ 1.25
HECTD4-206ENST00000548140 ILDR1Q86SU0 546 aaPredicted RBP22.89■■□□□ 1.25
HECTD4-206ENST00000548140 ROBO2Q9HCK4 1378 aa22.88■■□□□ 1.25
HECTD4-206ENST00000548140 XRN1Q8IZH2 1706 aaKnown RBP22.88■■□□□ 1.25
HECTD4-206ENST00000548140 SIRT1Q96EB6 747 aa22.88■■□□□ 1.25
HECTD4-206ENST00000548140 CPS1P31327 1500 aa22.88■■□□□ 1.25
HECTD4-206ENST00000548140 FAM135BQ49AJ0 1406 aa22.86■■□□□ 1.25
HECTD4-206ENST00000548140 PLEKHH1Q9ULM0 1364 aa22.85■■□□□ 1.25
HECTD4-206ENST00000548140 PTCH1Q13635 1447 aa22.85■■□□□ 1.25
HECTD4-206ENST00000548140 NWD1Q149M9 1564 aa22.84■■□□□ 1.25
HECTD4-206ENST00000548140 TESK2Q96S53 571 aa22.83■■□□□ 1.25
HECTD4-206ENST00000548140 ZNF316A6NFI3 1004 aaPredicted RBP22.82■■□□□ 1.24
HECTD4-206ENST00000548140 ZNF335Q9H4Z2 1342 aaPredicted RBP22.82■■□□□ 1.24
HECTD4-206ENST00000548140 QRICH2Q9H0J4 1663 aa22.82■■□□□ 1.24
HECTD4-206ENST00000548140 MINK1Q8N4C8 1332 aaPredicted RBP22.81■■□□□ 1.24
HECTD4-206ENST00000548140 PROSER2Q86WR7 435 aaPredicted RBP22.81■■□□□ 1.24
HECTD4-206ENST00000548140 STRCP1A6NGW2 1772 aa22.8■■□□□ 1.24
HECTD4-206ENST00000548140 NKTRP30414 1462 aaKnown RBP22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms