RNA–Protein interactions for RNA: ENST00000547606.1

C12orf49-202, Transcript of chromosome 12 open reading frame 49, humanhuman

TSL 3

Gene C12orf49, Length 492 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49-202ENST00000547606 STAG3Q9UJ98 1225 aa19.71■□□□□ 0.75
C12orf49-202ENST00000547606 MPHOSPH9Q99550 1183 aa19.7■□□□□ 0.74
C12orf49-202ENST00000547606 SPHKAPQ2M3C7 1700 aa19.69■□□□□ 0.74
C12orf49-202ENST00000547606 FOXD1Q16676 465 aa19.69■□□□□ 0.74
C12orf49-202ENST00000547606 SLC52A1Q9NWF4 448 aa19.69■□□□□ 0.74
C12orf49-202ENST00000547606 ACIN1Q9UKV3 1341 aaKnown RBP19.69■□□□□ 0.74
C12orf49-202ENST00000547606 UBR1Q8IWV7 1749 aa19.68■□□□□ 0.74
C12orf49-202ENST00000547606 CHGAP10645 457 aaKnown RBP19.67■□□□□ 0.74
C12orf49-202ENST00000547606 ROBO1Q9Y6N7 1651 aa19.66■□□□□ 0.74
C12orf49-202ENST00000547606 ADGRB3O60242 1522 aa19.66■□□□□ 0.74
C12orf49-202ENST00000547606 TRPM2O94759 1503 aa19.64■□□□□ 0.73
C12orf49-202ENST00000547606 HRCP23327 699 aa19.63■□□□□ 0.73
C12orf49-202ENST00000547606 CLTCL1P53675 1640 aa19.62■□□□□ 0.73
C12orf49-202ENST00000547606 KDM5AP29375 1690 aaKnown RBP19.6■□□□□ 0.73
C12orf49-202ENST00000547606 TMEM2Q9UHN6 1383 aa19.59■□□□□ 0.73
C12orf49-202ENST00000547606 TMEM131LA2VDJ0 1609 aa19.59■□□□□ 0.73
C12orf49-202ENST00000547606 FAM135BQ49AJ0 1406 aa19.59■□□□□ 0.73
C12orf49-202ENST00000547606 MYO5BQ9ULV0 1848 aa19.58■□□□□ 0.73
C12orf49-202ENST00000547606 SLIT1O75093 1534 aa19.58■□□□□ 0.73
C12orf49-202ENST00000547606 PHLPP1O60346 1717 aa19.58■□□□□ 0.72
C12orf49-202ENST00000547606 SCAF11Q99590 1463 aaKnown RBP19.58■□□□□ 0.72
C12orf49-202ENST00000547606 ARHGAP23Q9P227 1491 aa19.57■□□□□ 0.72
C12orf49-202ENST00000547606 TXNDC2Q86VQ3 553 aa19.57■□□□□ 0.72
C12orf49-202ENST00000547606 EID1Q9Y6B2 187 aa19.57■□□□□ 0.72
C12orf49-202ENST00000547606 LTKP29376 864 aa19.56■□□□□ 0.72
C12orf49-202ENST00000547606 ZNF326Q5BKZ1 582 aaKnown RBP19.55■□□□□ 0.72
C12orf49-202ENST00000547606 CCDC144AA2RUR9 1427 aa19.54■□□□□ 0.72
C12orf49-202ENST00000547606 RIMS2Q9UQ26 1411 aa19.54■□□□□ 0.72
C12orf49-202ENST00000547606 NUTM2DQ5VT03 806 aaPredicted RBP19.53■□□□□ 0.72
C12orf49-202ENST00000547606 PPP1R15AO75807 674 aaPredicted RBP19.52■□□□□ 0.72
C12orf49-202ENST00000547606 KIF1BO60333 1816 aa19.52■□□□□ 0.72
C12orf49-202ENST00000547606 PCGF6Q9BYE7 350 aa19.51■□□□□ 0.71
C12orf49-202ENST00000547606 ZFYVE9O95405 1425 aa19.51■□□□□ 0.71
C12orf49-202ENST00000547606 UPF1Q92900 1129 aaKnown RBP eCLIP19.5■□□□□ 0.71
C12orf49-202ENST00000547606 BCANQ96GW7 911 aa19.5■□□□□ 0.71
C12orf49-202ENST00000547606 HDGFP51858 240 aaKnown RBP19.48■□□□□ 0.71
C12orf49-202ENST00000547606 TMEM94Q12767 1356 aa19.47■□□□□ 0.71
C12orf49-202ENST00000547606 ANKRD30BQ9BXX2 1392 aa19.47■□□□□ 0.71
C12orf49-202ENST00000547606 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.47■□□□□ 0.71
C12orf49-202ENST00000547606 RGL3Q3MIN7 710 aa19.45■□□□□ 0.7
C12orf49-202ENST00000547606 COL16A1Q07092 1604 aaPredicted RBP19.44■□□□□ 0.7
C12orf49-202ENST00000547606 RBM33Q96EV2 1170 aaKnown RBP19.44■□□□□ 0.7
C12orf49-202ENST00000547606 NEXMIFQ5QGS0 1516 aa19.43■□□□□ 0.7
C12orf49-202ENST00000547606 SLC26A8Q96RN1 970 aa19.43■□□□□ 0.7
C12orf49-202ENST00000547606 PLEKHG1Q9ULL1 1385 aa19.43■□□□□ 0.7
C12orf49-202ENST00000547606 LRP6O75581 1613 aa19.42■□□□□ 0.7
C12orf49-202ENST00000547606 JCADQ9P266 1359 aa19.42■□□□□ 0.7
C12orf49-202ENST00000547606 SPATA31E1Q6ZUB1 1445 aa19.42■□□□□ 0.7
C12orf49-202ENST00000547606 DHX57Q6P158 1386 aaKnown RBP19.4■□□□□ 0.7
C12orf49-202ENST00000547606 RPGRIP1LQ68CZ1 1315 aa19.39■□□□□ 0.69
C12orf49-202ENST00000547606 NWD1Q149M9 1564 aa19.39■□□□□ 0.69
C12orf49-202ENST00000547606 PROSER2Q86WR7 435 aaPredicted RBP19.38■□□□□ 0.69
C12orf49-202ENST00000547606 SHPRHQ149N8 1683 aa19.37■□□□□ 0.69
C12orf49-202ENST00000547606 PPLO60437 1756 aa19.37■□□□□ 0.69
C12orf49-202ENST00000547606 VGFO15240 615 aaPredicted RBP19.35■□□□□ 0.69
C12orf49-202ENST00000547606 MEX3CQ5U5Q3 659 aaKnown RBP19.35■□□□□ 0.69
C12orf49-202ENST00000547606 NKTRP30414 1462 aaKnown RBP19.35■□□□□ 0.69
C12orf49-202ENST00000547606 ADAMTS13Q76LX8 1427 aa19.34■□□□□ 0.69
C12orf49-202ENST00000547606 MSH6P52701 1360 aa19.34■□□□□ 0.69
C12orf49-202ENST00000547606 KCNA6P17658 529 aa19.34■□□□□ 0.69
C12orf49-202ENST00000547606 SETBP1Q9Y6X0 1596 aa19.33■□□□□ 0.69
C12orf49-202ENST00000547606 NRXN3Q9Y4C0 1643 aa19.33■□□□□ 0.68
C12orf49-202ENST00000547606 SRCAPQ6ZRS2 3230 aa19.32■□□□□ 0.68
C12orf49-202ENST00000547606 CHD2O14647 1828 aaKnown RBP19.32■□□□□ 0.68
C12orf49-202ENST00000547606 IFT172Q9UG01 1749 aa19.32■□□□□ 0.68
C12orf49-202ENST00000547606 ZNF772Q68DY9 489 aaPredicted RBP19.32■□□□□ 0.68
C12orf49-202ENST00000547606 DIP2AQ14689 1571 aa19.32■□□□□ 0.68
C12orf49-202ENST00000547606 ADGRF5Q8IZF2 1346 aa19.31■□□□□ 0.68
C12orf49-202ENST00000547606 SLAIN2Q9P270 581 aa19.31■□□□□ 0.68
C12orf49-202ENST00000547606 TBX22Q9Y458 520 aa19.31■□□□□ 0.68
C12orf49-202ENST00000547606 NEUROD1Q13562 356 aa19.3■□□□□ 0.68
C12orf49-202ENST00000547606 SIN3AQ96ST3 1273 aa19.3■□□□□ 0.68
C12orf49-202ENST00000547606 SPATA31A6Q5VVP1 1343 aa19.29■□□□□ 0.68
C12orf49-202ENST00000547606 DCAF11Q8TEB1 546 aa19.28■□□□□ 0.68
C12orf49-202ENST00000547606 KDM2AQ9Y2K7 1162 aa19.28■□□□□ 0.68
C12orf49-202ENST00000547606 CDK12Q9NYV4 1490 aaPredicted RBP19.28■□□□□ 0.68
C12orf49-202ENST00000547606 AHDC1Q5TGY3 1603 aaPredicted RBP19.27■□□□□ 0.68
C12orf49-202ENST00000547606 RXRBP28702 533 aa19.27■□□□□ 0.68
C12orf49-202ENST00000547606 MYOM2P54296 1465 aa19.26■□□□□ 0.67
C12orf49-202ENST00000547606 METP08581 1390 aa19.25■□□□□ 0.67
C12orf49-202ENST00000547606 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.25■□□□□ 0.67
C12orf49-202ENST00000547606 PIK3R4Q99570 1358 aa19.24■□□□□ 0.67
C12orf49-202ENST00000547606 PIK3C2GO75747 1445 aa19.24■□□□□ 0.67
C12orf49-202ENST00000547606 PTPRUQ92729 1446 aa19.23■□□□□ 0.67
C12orf49-202ENST00000547606 AMOTL2Q9Y2J4 779 aa19.22■□□□□ 0.67
C12orf49-202ENST00000547606 NRXN1Q9ULB1 1477 aa19.21■□□□□ 0.67
C12orf49-202ENST00000547606 RGS12O14924 1447 aa19.19■□□□□ 0.66
C12orf49-202ENST00000547606 NUTM2BA6NNL0 878 aaPredicted RBP19.19■□□□□ 0.66
C12orf49-202ENST00000547606 NUTM2EB1AL46 878 aaPredicted RBP19.19■□□□□ 0.66
C12orf49-202ENST00000547606 NUTM2AQ8IVF1 878 aaPredicted RBP19.19■□□□□ 0.66
C12orf49-202ENST00000547606 CFAP70Q5T0N1 1121 aa19.18■□□□□ 0.66
C12orf49-202ENST00000547606 L3MBTL2Q969R5 705 aa19.18■□□□□ 0.66
C12orf49-202ENST00000547606 XRN1Q8IZH2 1706 aaKnown RBP19.17■□□□□ 0.66
C12orf49-202ENST00000547606 TMEM132EQ6IEE7 984 aa19.17■□□□□ 0.66
C12orf49-202ENST00000547606 AFF2P51816 1311 aa19.17■□□□□ 0.66
C12orf49-202ENST00000547606 STAC3Q96MF2 364 aa19.16■□□□□ 0.66
C12orf49-202ENST00000547606 C14orf93Q9H972 538 aaKnown RBP19.16■□□□□ 0.66
C12orf49-202ENST00000547606 STK26Q9P289 416 aa19.16■□□□□ 0.66
C12orf49-202ENST00000547606 ASXL1Q8IXJ9 1541 aa19.15■□□□□ 0.66
C12orf49-202ENST00000547606 LAMC1P11047 1609 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 236.3 ms