RNA–Protein interactions for RNA: ENST00000547356.1

SMARCC2-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 741 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-204ENST00000547356 CLTCL1P53675 1640 aa34.94■■■■□ 3.18
SMARCC2-204ENST00000547356 TRPM2O94759 1503 aa34.93■■■■□ 3.18
SMARCC2-204ENST00000547356 SETD5Q9C0A6 1442 aa34.93■■■■□ 3.18
SMARCC2-204ENST00000547356 FOXD1Q16676 465 aa34.92■■■■□ 3.18
SMARCC2-204ENST00000547356 SLC26A8Q96RN1 970 aa34.92■■■■□ 3.18
SMARCC2-204ENST00000547356 PPP1R15AO75807 674 aaPredicted RBP34.89■■■■□ 3.18
SMARCC2-204ENST00000547356 BCANQ96GW7 911 aa34.88■■■■□ 3.17
SMARCC2-204ENST00000547356 PLEKHG1Q9ULL1 1385 aa34.86■■■■□ 3.17
SMARCC2-204ENST00000547356 RAB3GAP2Q9H2M9 1393 aa34.85■■■■□ 3.17
SMARCC2-204ENST00000547356 MPHOSPH9Q99550 1183 aa34.84■■■■□ 3.17
SMARCC2-204ENST00000547356 HDGFP51858 240 aaKnown RBP34.82■■■■□ 3.16
SMARCC2-204ENST00000547356 LRRC7Q96NW7 1537 aa34.81■■■■□ 3.16
SMARCC2-204ENST00000547356 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.81■■■■□ 3.16
SMARCC2-204ENST00000547356 UBAP1LF5GYI3 381 aa34.8■■■■□ 3.16
SMARCC2-204ENST00000547356 ZNF326Q5BKZ1 582 aaKnown RBP34.8■■■■□ 3.16
SMARCC2-204ENST00000547356 KIF1BO60333 1816 aa34.74■■■■□ 3.15
SMARCC2-204ENST00000547356 ADAMTS13Q76LX8 1427 aa34.73■■■■□ 3.15
SMARCC2-204ENST00000547356 KCNA6P17658 529 aa34.72■■■■□ 3.15
SMARCC2-204ENST00000547356 NEXMIFQ5QGS0 1516 aa34.71■■■■□ 3.15
SMARCC2-204ENST00000547356 NWD1Q149M9 1564 aa34.67■■■■□ 3.14
SMARCC2-204ENST00000547356 RBM33Q96EV2 1170 aaKnown RBP34.67■■■■□ 3.14
SMARCC2-204ENST00000547356 TBX22Q9Y458 520 aa34.67■■■■□ 3.14
SMARCC2-204ENST00000547356 ALKQ9UM73 1620 aa34.65■■■■□ 3.14
SMARCC2-204ENST00000547356 XIRP1Q702N8 1843 aaKnown RBP34.65■■■■□ 3.14
SMARCC2-204ENST00000547356 CCDC144AA2RUR9 1427 aa34.64■■■■□ 3.14
SMARCC2-204ENST00000547356 NRXN3Q9Y4C0 1643 aa34.64■■■■□ 3.14
SMARCC2-204ENST00000547356 ACIN1Q9UKV3 1341 aaKnown RBP34.63■■■■□ 3.13
SMARCC2-204ENST00000547356 PIP4K2BP78356 416 aa34.63■■■■□ 3.13
SMARCC2-204ENST00000547356 TMEM94Q12767 1356 aa34.62■■■■□ 3.13
SMARCC2-204ENST00000547356 DIP2AQ14689 1571 aa34.62■■■■□ 3.13
SMARCC2-204ENST00000547356 SCAF1Q9H7N4 1312 aaKnown RBP34.61■■■■□ 3.13
SMARCC2-204ENST00000547356 PROSER2Q86WR7 435 aaPredicted RBP34.61■■■■□ 3.13
SMARCC2-204ENST00000547356 SETBP1Q9Y6X0 1596 aa34.61■■■■□ 3.13
SMARCC2-204ENST00000547356 CHD2O14647 1828 aaKnown RBP34.6■■■■□ 3.13
SMARCC2-204ENST00000547356 TOM1O60784 492 aa34.6■■■■□ 3.13
SMARCC2-204ENST00000547356 NKTRP30414 1462 aaKnown RBP34.59■■■■□ 3.13
SMARCC2-204ENST00000547356 PTPRUQ92729 1446 aa34.55■■■■□ 3.12
SMARCC2-204ENST00000547356 RGL3Q3MIN7 710 aa34.54■■■■□ 3.12
SMARCC2-204ENST00000547356 SPATA31E1Q6ZUB1 1445 aa34.54■■■■□ 3.12
SMARCC2-204ENST00000547356 PPLO60437 1756 aa34.51■■■■□ 3.12
SMARCC2-204ENST00000547356 METP08581 1390 aa34.51■■■■□ 3.12
SMARCC2-204ENST00000547356 PIK3R4Q99570 1358 aa34.51■■■■□ 3.12
SMARCC2-204ENST00000547356 HRCP23327 699 aa34.51■■■■□ 3.12
SMARCC2-204ENST00000547356 RPGRIP1LQ68CZ1 1315 aa34.51■■■■□ 3.11
SMARCC2-204ENST00000547356 VGFO15240 615 aaPredicted RBP34.48■■■■□ 3.11
SMARCC2-204ENST00000547356 AMOTL2Q9Y2J4 779 aa34.48■■■■□ 3.11
SMARCC2-204ENST00000547356 ADGRF5Q8IZF2 1346 aa34.43■■■■□ 3.1
SMARCC2-204ENST00000547356 ANKRD30BQ9BXX2 1392 aa34.43■■■■□ 3.1
SMARCC2-204ENST00000547356 XRN1Q8IZH2 1706 aaKnown RBP34.42■■■■□ 3.1
SMARCC2-204ENST00000547356 HSPA1LP34931 641 aa34.42■■■■□ 3.1
SMARCC2-204ENST00000547356 SETD1AO15047 1707 aaKnown RBP34.4■■■■□ 3.1
SMARCC2-204ENST00000547356 IFT172Q9UG01 1749 aa34.4■■■■□ 3.1
SMARCC2-204ENST00000547356 MSH6P52701 1360 aa34.38■■■■□ 3.09
SMARCC2-204ENST00000547356 C14orf37Q86TY3 774 aa34.35■■■■□ 3.09
SMARCC2-204ENST00000547356 NCOA3Q9Y6Q9 1424 aa34.3■■■■□ 3.08
SMARCC2-204ENST00000547356 PIK3C2GO75747 1445 aa34.26■■■■□ 3.07
SMARCC2-204ENST00000547356 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.26■■■■□ 3.07
SMARCC2-204ENST00000547356 C19orf44Q9H6X5 657 aa34.24■■■■□ 3.07
SMARCC2-204ENST00000547356 ROBO2Q9HCK4 1378 aa34.23■■■■□ 3.07
SMARCC2-204ENST00000547356 FAM135BQ49AJ0 1406 aa34.23■■■■□ 3.07
SMARCC2-204ENST00000547356 ROBO1Q9Y6N7 1651 aa34.22■■■■□ 3.07
SMARCC2-204ENST00000547356 ASXL1Q8IXJ9 1541 aa34.22■■■■□ 3.07
SMARCC2-204ENST00000547356 SLAIN2Q9P270 581 aa34.22■■■■□ 3.07
SMARCC2-204ENST00000547356 MYOM2P54296 1465 aa34.21■■■■□ 3.07
SMARCC2-204ENST00000547356 TMEM132EQ6IEE7 984 aa34.2■■■■□ 3.07
SMARCC2-204ENST00000547356 PTCH1Q13635 1447 aa34.19■■■■□ 3.06
SMARCC2-204ENST00000547356 NRXN1Q9ULB1 1477 aa34.19■■■■□ 3.06
SMARCC2-204ENST00000547356 ATF3P18847 181 aa34.18■■■■□ 3.06
SMARCC2-204ENST00000547356 CADPS2Q86UW7 1296 aa34.16■■■■□ 3.06
SMARCC2-204ENST00000547356 STK26Q9P289 416 aa34.16■■■■□ 3.06
SMARCC2-204ENST00000547356 NALCNQ8IZF0 1738 aa34.16■■■■□ 3.06
SMARCC2-204ENST00000547356 PRAG1Q86YV5 1406 aa34.15■■■■□ 3.06
SMARCC2-204ENST00000547356 ADGRL3Q9HAR2 1447 aa34.15■■■■□ 3.06
SMARCC2-204ENST00000547356 CFAP70Q5T0N1 1121 aa34.14■■■■□ 3.06
SMARCC2-204ENST00000547356 KDM2AQ9Y2K7 1162 aa34.14■■■■□ 3.06
SMARCC2-204ENST00000547356 DCAF11Q8TEB1 546 aa34.12■■■■□ 3.05
SMARCC2-204ENST00000547356 C14orf93Q9H972 538 aaKnown RBP34.12■■■■□ 3.05
SMARCC2-204ENST00000547356 DHX57Q6P158 1386 aaKnown RBP34.11■■■■□ 3.05
SMARCC2-204ENST00000547356 TRIM26Q12899 539 aaPredicted RBP34.11■■■■□ 3.05
SMARCC2-204ENST00000547356 DCCP43146 1447 aa34.11■■■■□ 3.05
SMARCC2-204ENST00000547356 LRPPRCP42704 1394 aaKnown RBP34.11■■■■□ 3.05
SMARCC2-204ENST00000547356 DISP3Q9P2K9 1392 aa34.09■■■■□ 3.05
SMARCC2-204ENST00000547356 MST1RQ04912 1400 aa34.06■■■■□ 3.04
SMARCC2-204ENST00000547356 YTHDC2Q9H6S0 1430 aaKnown RBP34.06■■■■□ 3.04
SMARCC2-204ENST00000547356 TECPR2O15040 1411 aa34.05■■■■□ 3.04
SMARCC2-204ENST00000547356 WAPLQ7Z5K2 1190 aa34.05■■■■□ 3.04
SMARCC2-204ENST00000547356 ABCC11Q96J66 1382 aa34.04■■■■□ 3.04
SMARCC2-204ENST00000547356 PLEKHH1Q9ULM0 1364 aa34.04■■■■□ 3.04
SMARCC2-204ENST00000547356 LAMC1P11047 1609 aa34.04■■■■□ 3.04
SMARCC2-204ENST00000547356 KNDC1Q76NI1 1749 aa34.01■■■■□ 3.04
SMARCC2-204ENST00000547356 BRINP3Q76B58 766 aa34.01■■■■□ 3.03
SMARCC2-204ENST00000547356 PHLPP1O60346 1717 aa34■■■■□ 3.03
SMARCC2-204ENST00000547356 MED1Q15648 1581 aaPredicted RBP34■■■■□ 3.03
SMARCC2-204ENST00000547356 SIN3AQ96ST3 1273 aa33.98■■■■□ 3.03
SMARCC2-204ENST00000547356 ADGRB1O14514 1584 aa33.96■■■■□ 3.03
SMARCC2-204ENST00000547356 C1orf167Q5SNV9 1468 aa33.94■■■■□ 3.02
SMARCC2-204ENST00000547356 COL16A1Q07092 1604 aaPredicted RBP33.93■■■■□ 3.02
SMARCC2-204ENST00000547356 AHDC1Q5TGY3 1603 aaPredicted RBP33.92■■■■□ 3.02
SMARCC2-204ENST00000547356 STAC3Q96MF2 364 aa33.91■■■■□ 3.02
SMARCC2-204ENST00000547356 DDX17Q92841 729 aaKnown RBP33.9■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms