RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 CENPJQ9HC77 1338 aaPredicted RBP16.92■□□□□ 0.3
SCAF11-209ENST00000547018 GPRASP1Q5JY77 1395 aa16.91■□□□□ 0.3
SCAF11-209ENST00000547018 POGKQ9P215 609 aa16.91■□□□□ 0.3
SCAF11-209ENST00000547018 RRP7AQ9Y3A4 280 aaKnown RBP16.91■□□□□ 0.3
SCAF11-209ENST00000547018 CLTCL1P53675 1640 aa16.91■□□□□ 0.3
SCAF11-209ENST00000547018 PRDM15P57071 1507 aaPredicted RBP16.9■□□□□ 0.3
SCAF11-209ENST00000547018 ABCA9Q8IUA7 1624 aa16.9■□□□□ 0.3
SCAF11-209ENST00000547018 NPATQ14207 1427 aa16.9■□□□□ 0.3
SCAF11-209ENST00000547018 CARD14Q9BXL6 1004 aa16.9■□□□□ 0.3
SCAF11-209ENST00000547018 RCAN3Q9UKA8 241 aa16.9■□□□□ 0.3
SCAF11-209ENST00000547018 COL17A1Q9UMD9 1497 aaPredicted RBP16.89■□□□□ 0.29
SCAF11-209ENST00000547018 POGZQ7Z3K3 1410 aa16.89■□□□□ 0.29
SCAF11-209ENST00000547018 AMER1Q5JTC6 1135 aaPredicted RBP16.88■□□□□ 0.29
SCAF11-209ENST00000547018 MORC1Q86VD1 984 aa16.88■□□□□ 0.29
SCAF11-209ENST00000547018 EXOC6Q8TAG9 804 aa16.88■□□□□ 0.29
SCAF11-209ENST00000547018 EIF3AQ14152 1382 aaKnown RBP16.88■□□□□ 0.29
SCAF11-209ENST00000547018 APAF1O14727 1248 aa16.88■□□□□ 0.29
SCAF11-209ENST00000547018 PPM1GO15355 546 aaPredicted RBP16.88■□□□□ 0.29
SCAF11-209ENST00000547018 NUTM2FA1L443 756 aa16.87■□□□□ 0.29
SCAF11-209ENST00000547018 SCAF11Q99590 1463 aaKnown RBP16.87■□□□□ 0.29
SCAF11-209ENST00000547018 PARD3Q8TEW0 1356 aa16.87■□□□□ 0.29
SCAF11-209ENST00000547018 TSPOAP1O95153 1857 aa16.87■□□□□ 0.29
SCAF11-209ENST00000547018 MAGI2Q86UL8 1455 aa16.86■□□□□ 0.29
SCAF11-209ENST00000547018 VGFO15240 615 aaPredicted RBP16.86■□□□□ 0.29
SCAF11-209ENST00000547018 SKAP1Q86WV1 359 aa16.86■□□□□ 0.29
SCAF11-209ENST00000547018 PTPRTO14522 1441 aa16.85■□□□□ 0.29
SCAF11-209ENST00000547018 KIDINS220Q9ULH0 1771 aa16.85■□□□□ 0.29
SCAF11-209ENST00000547018 TRPM2O94759 1503 aa16.84■□□□□ 0.29
SCAF11-209ENST00000547018 FBLN1P23142 703 aa16.83■□□□□ 0.28
SCAF11-209ENST00000547018 PRAM1Q96QH2 718 aa16.82■□□□□ 0.28
SCAF11-209ENST00000547018 C14orf93Q9H972 538 aaKnown RBP16.82■□□□□ 0.28
SCAF11-209ENST00000547018 INO80Q9ULG1 1556 aaPredicted RBP16.82■□□□□ 0.28
SCAF11-209ENST00000547018 CEP152O94986 1710 aa16.82■□□□□ 0.28
SCAF11-209ENST00000547018 GGNBP2Q9H3C7 697 aa16.82■□□□□ 0.28
SCAF11-209ENST00000547018 SPHKAPQ2M3C7 1700 aa16.82■□□□□ 0.28
SCAF11-209ENST00000547018 TRHP20396 242 aaPredicted RBP16.81■□□□□ 0.28
SCAF11-209ENST00000547018 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.81■□□□□ 0.286e-6■■□□□ 14.4
SCAF11-209ENST00000547018 POLR1AO95602 1720 aaPredicted RBP16.81■□□□□ 0.28
SCAF11-209ENST00000547018 WAPLQ7Z5K2 1190 aa16.81■□□□□ 0.28
SCAF11-209ENST00000547018 SMG6Q86US8 1419 aaKnown RBP16.8■□□□□ 0.28
SCAF11-209ENST00000547018 U2SURPO15042 1029 aaKnown RBP16.8■□□□□ 0.28
SCAF11-209ENST00000547018 RRP1P56182 461 aaKnown RBP16.8■□□□□ 0.28
SCAF11-209ENST00000547018 ARAP3Q8WWN8 1544 aa16.79■□□□□ 0.28
SCAF11-209ENST00000547018 NPM2Q86SE8 214 aaKnown RBP16.79■□□□□ 0.28
SCAF11-209ENST00000547018 TET3O43151 1660 aa16.78■□□□□ 0.28
SCAF11-209ENST00000547018 LRPPRCP42704 1394 aaKnown RBP16.78■□□□□ 0.28
SCAF11-209ENST00000547018 CEBPAP49715 358 aaPredicted RBP16.78■□□□□ 0.28
SCAF11-209ENST00000547018 MTHFSP49914 203 aa16.78■□□□□ 0.28
SCAF11-209ENST00000547018 C20orf194Q5TEA3 1177 aa16.78■□□□□ 0.28
SCAF11-209ENST00000547018 PPRC1Q5VV67 1664 aaKnown RBP16.77■□□□□ 0.28
SCAF11-209ENST00000547018 EIF2AK4Q9P2K8 1649 aaKnown RBP16.77■□□□□ 0.28
SCAF11-209ENST00000547018 STAC3Q96MF2 364 aa16.77■□□□□ 0.28
SCAF11-209ENST00000547018 MADDQ8WXG6 1647 aa16.77■□□□□ 0.28
SCAF11-209ENST00000547018 SOX12O15370 315 aa16.76■□□□□ 0.27
SCAF11-209ENST00000547018 PLEKHG5O94827 1062 aa16.76■□□□□ 0.27
SCAF11-209ENST00000547018 U2AF1L5P0DN76 240 aaPredicted RBP16.75■□□□□ 0.27
SCAF11-209ENST00000547018 U2AF1Q01081 240 aaKnown RBP eCLIP16.75■□□□□ 0.27
SCAF11-209ENST00000547018 NSD3Q9BZ95 1437 aa16.75■□□□□ 0.27
SCAF11-209ENST00000547018 EFCAB6Q5THR3 1501 aa16.75■□□□□ 0.27
SCAF11-209ENST00000547018 MROH1Q8NDA8 1641 aa16.75■□□□□ 0.27
SCAF11-209ENST00000547018 SPINK5Q9NQ38 1064 aaPredicted RBP16.74■□□□□ 0.27
SCAF11-209ENST00000547018 CRBNQ96SW2 442 aa16.74■□□□□ 0.27
SCAF11-209ENST00000547018 BCL2L13Q9BXK5 485 aa16.74■□□□□ 0.27
SCAF11-209ENST00000547018 DMRT2Q9Y5R5 561 aa16.74■□□□□ 0.27
SCAF11-209ENST00000547018 MLH3Q9UHC1 1453 aa16.74■□□□□ 0.27
SCAF11-209ENST00000547018 EVC2Q86UK5 1308 aa16.74■□□□□ 0.27
SCAF11-209ENST00000547018 GOLGA2Q08379 1002 aa16.74■□□□□ 0.27
SCAF11-209ENST00000547018 ERICH6Q7L0X2 663 aa16.73■□□□□ 0.27
SCAF11-209ENST00000547018 TXNDC2Q86VQ3 553 aa16.73■□□□□ 0.27
SCAF11-209ENST00000547018 RNF17Q9BXT8 1623 aaKnown RBP16.73■□□□□ 0.27
SCAF11-209ENST00000547018 CANXP27824 592 aaKnown RBP16.73■□□□□ 0.27
SCAF11-209ENST00000547018 HECW2Q9P2P5 1572 aa16.73■□□□□ 0.27
SCAF11-209ENST00000547018 FRAT1Q92837 279 aaPredicted RBP16.72■□□□□ 0.27
SCAF11-209ENST00000547018 SLC52A1Q9NWF4 448 aa16.72■□□□□ 0.27
SCAF11-209ENST00000547018 PLEKHH1Q9ULM0 1364 aa16.72■□□□□ 0.27
SCAF11-209ENST00000547018 BCL11AQ9H165 835 aa16.72■□□□□ 0.27
SCAF11-209ENST00000547018 ABCA6Q8N139 1617 aa16.72■□□□□ 0.27
SCAF11-209ENST00000547018 FRMPD1Q5SYB0 1578 aa16.71■□□□□ 0.27
SCAF11-209ENST00000547018 NCKAP5LQ9HCH0 1330 aa16.71■□□□□ 0.27
SCAF11-209ENST00000547018 KIF1BO60333 1816 aa16.71■□□□□ 0.27
SCAF11-209ENST00000547018 CABP1Q9NZU7 370 aa16.71■□□□□ 0.27
SCAF11-209ENST00000547018 ERVK-7P63135 1459 aa16.71■□□□□ 0.27
SCAF11-209ENST00000547018 BCAR3O75815 825 aa16.69■□□□□ 0.26
SCAF11-209ENST00000547018 ABCC3O15438 1527 aa16.69■□□□□ 0.26
SCAF11-209ENST00000547018 MROH2AA6NES4 1674 aa16.69■□□□□ 0.26
SCAF11-209ENST00000547018 CDK19Q9BWU1 502 aa16.68■□□□□ 0.26
SCAF11-209ENST00000547018 CGNL1Q0VF96 1302 aa16.68■□□□□ 0.26
SCAF11-209ENST00000547018 DEPDC5O75140 1603 aa16.68■□□□□ 0.26
SCAF11-209ENST00000547018 NEO1Q92859 1461 aa16.67■□□□□ 0.26
SCAF11-209ENST00000547018 PDE3BQ13370 1112 aa16.67■□□□□ 0.26
SCAF11-209ENST00000547018 RPGRIP1LQ68CZ1 1315 aa16.66■□□□□ 0.26
SCAF11-209ENST00000547018 MAP3K4Q9Y6R4 1608 aa16.66■□□□□ 0.26
SCAF11-209ENST00000547018 SLC26A8Q96RN1 970 aa16.66■□□□□ 0.26
SCAF11-209ENST00000547018 ASXL1Q8IXJ9 1541 aa16.66■□□□□ 0.26
SCAF11-209ENST00000547018 VWDEQ8N2E2 1590 aa16.66■□□□□ 0.26
SCAF11-209ENST00000547018 ERICH6BQ5W0A0 696 aa16.65■□□□□ 0.26
SCAF11-209ENST00000547018 TCP11L2Q8N4U5 519 aa16.65■□□□□ 0.26
SCAF11-209ENST00000547018 CLUAP1Q96AJ1 413 aa16.65■□□□□ 0.26
SCAF11-209ENST00000547018 CFAP53Q96M91 514 aa16.65■□□□□ 0.26
SCAF11-209ENST00000547018 SLC24A1O60721 1099 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms