RNA–Protein interactions for RNA: ENST00000546814.1

LETMD1-204, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 894 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-204ENST00000546814 KIF15Q9NS87 1388 aa10.74□□□□□ -0.69
LETMD1-204ENST00000546814 NOS1P29475 1434 aa10.74□□□□□ -0.69
LETMD1-204ENST00000546814 NWD1Q149M9 1564 aa10.73□□□□□ -0.69
LETMD1-204ENST00000546814 TMEM94Q12767 1356 aa10.73□□□□□ -0.69
LETMD1-204ENST00000546814 NCOA3Q9Y6Q9 1424 aa10.73□□□□□ -0.69
LETMD1-204ENST00000546814 EFCAB6Q5THR3 1501 aa10.73□□□□□ -0.69
LETMD1-204ENST00000546814 CEP152O94986 1710 aa10.72□□□□□ -0.69
LETMD1-204ENST00000546814 SLC52A1Q9NWF4 448 aa10.72□□□□□ -0.69
LETMD1-204ENST00000546814 ABCC5O15440 1437 aa10.72□□□□□ -0.69
LETMD1-204ENST00000546814 PIK3C2BO00750 1634 aa10.72□□□□□ -0.69
LETMD1-204ENST00000546814 IDI1Q13907 227 aa10.71□□□□□ -0.69
LETMD1-204ENST00000546814 POTEAQ6S8J7 498 aa10.71□□□□□ -0.69
LETMD1-204ENST00000546814 RPRD2Q5VT52 1461 aaKnown RBP10.7□□□□□ -0.7
LETMD1-204ENST00000546814 KANK4Q5T7N3 995 aaPredicted RBP10.7□□□□□ -0.7
LETMD1-204ENST00000546814 ATF5Q9Y2D1 282 aaPredicted RBP10.69□□□□□ -0.7
LETMD1-204ENST00000546814 CROCC2H7BZ55 1655 aa10.69□□□□□ -0.7
LETMD1-204ENST00000546814 ROBO1Q9Y6N7 1651 aa10.69□□□□□ -0.7
LETMD1-204ENST00000546814 KANK1Q14678 1352 aa10.68□□□□□ -0.7
LETMD1-204ENST00000546814 ADGRB3O60242 1522 aa10.68□□□□□ -0.7
LETMD1-204ENST00000546814 ZFYVE9O95405 1425 aa10.67□□□□□ -0.7
LETMD1-204ENST00000546814 DAPK1P53355 1430 aa10.67□□□□□ -0.7
LETMD1-204ENST00000546814 FGD6Q6ZV73 1430 aa10.67□□□□□ -0.7
LETMD1-204ENST00000546814 JCADQ9P266 1359 aa10.67□□□□□ -0.7
LETMD1-204ENST00000546814 SLAIN2Q9P270 581 aa10.67□□□□□ -0.7
LETMD1-204ENST00000546814 PLEKHG1Q9ULL1 1385 aa10.66□□□□□ -0.7
LETMD1-204ENST00000546814 SLC24A1O60721 1099 aa10.66□□□□□ -0.7
LETMD1-204ENST00000546814 ADGRL2O95490 1459 aa10.66□□□□□ -0.7
LETMD1-204ENST00000546814 MSH6P52701 1360 aa10.65□□□□□ -0.7
LETMD1-204ENST00000546814 ANKRD30AQ9BXX3 1397 aa10.65□□□□□ -0.7
LETMD1-204ENST00000546814 ABCB7O75027 752 aa10.65□□□□□ -0.7
LETMD1-204ENST00000546814 PROSER2Q86WR7 435 aaPredicted RBP10.65□□□□□ -0.7
LETMD1-204ENST00000546814 RRP7BPQ9NSQ0 103 aa10.65□□□□□ -0.7
LETMD1-204ENST00000546814 TBX22Q9Y458 520 aa10.65□□□□□ -0.7
LETMD1-204ENST00000546814 SRCAPQ6ZRS2 3230 aa10.65□□□□□ -0.71
LETMD1-204ENST00000546814 PIK3R4Q99570 1358 aa10.65□□□□□ -0.71
LETMD1-204ENST00000546814 CFAP65Q6ZU64 1925 aaKnown RBP10.64□□□□□ -0.71
LETMD1-204ENST00000546814 SPATA31A6Q5VVP1 1343 aa10.64□□□□□ -0.71
LETMD1-204ENST00000546814 ATXN8OSP0DMR3 200 aa10.64□□□□□ -0.71
LETMD1-204ENST00000546814 SLC26A8Q96RN1 970 aa10.64□□□□□ -0.71
LETMD1-204ENST00000546814 PTPN23Q9H3S7 1636 aa10.64□□□□□ -0.71
LETMD1-204ENST00000546814 COL16A1Q07092 1604 aaPredicted RBP10.63□□□□□ -0.71
LETMD1-204ENST00000546814 HDGFP51858 240 aaKnown RBP10.63□□□□□ -0.71
LETMD1-204ENST00000546814 STAG3Q9UJ98 1225 aa10.63□□□□□ -0.71
LETMD1-204ENST00000546814 CHD2O14647 1828 aaKnown RBP10.63□□□□□ -0.71
LETMD1-204ENST00000546814 AHDC1Q5TGY3 1603 aaPredicted RBP10.62□□□□□ -0.71
LETMD1-204ENST00000546814 CDK12Q9NYV4 1490 aaPredicted RBP10.61□□□□□ -0.71
LETMD1-204ENST00000546814 DIP2AQ14689 1571 aa10.6□□□□□ -0.71
LETMD1-204ENST00000546814 TMEM131LA2VDJ0 1609 aa10.6□□□□□ -0.71
LETMD1-204ENST00000546814 ZNF772Q68DY9 489 aaPredicted RBP10.6□□□□□ -0.71
LETMD1-204ENST00000546814 C19orf44Q9H6X5 657 aa10.6□□□□□ -0.71
LETMD1-204ENST00000546814 DCCP43146 1447 aa10.59□□□□□ -0.71
LETMD1-204ENST00000546814 ADAMTS13Q76LX8 1427 aa10.59□□□□□ -0.71
LETMD1-204ENST00000546814 PHLPP1O60346 1717 aa10.59□□□□□ -0.71
LETMD1-204ENST00000546814 CADPS2Q86UW7 1296 aa10.59□□□□□ -0.71
LETMD1-204ENST00000546814 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.59□□□□□ -0.71
LETMD1-204ENST00000546814 ANKRD50Q9ULJ7 1429 aa10.58□□□□□ -0.72
LETMD1-204ENST00000546814 RIMS2Q9UQ26 1411 aa10.58□□□□□ -0.72
LETMD1-204ENST00000546814 LRP6O75581 1613 aa10.58□□□□□ -0.72
LETMD1-204ENST00000546814 SHPRHQ149N8 1683 aa10.58□□□□□ -0.72
LETMD1-204ENST00000546814 UPF1Q92900 1129 aaKnown RBP eCLIP10.58□□□□□ -0.721e-8■□□□□ 9.9
LETMD1-204ENST00000546814 POLA2Q14181 598 aa10.57□□□□□ -0.72
LETMD1-204ENST00000546814 RBM33Q96EV2 1170 aaKnown RBP10.56□□□□□ -0.72
LETMD1-204ENST00000546814 SETD5Q9C0A6 1442 aa10.56□□□□□ -0.72
LETMD1-204ENST00000546814 UNC13BO14795 1591 aa10.54□□□□□ -0.72
LETMD1-204ENST00000546814 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.54□□□□□ -0.72
LETMD1-204ENST00000546814 GCC2Q8IWJ2 1684 aa10.53□□□□□ -0.72
LETMD1-204ENST00000546814 ROCK1Q13464 1354 aa10.53□□□□□ -0.72
LETMD1-204ENST00000546814 BRINP3Q76B58 766 aa10.53□□□□□ -0.72
LETMD1-204ENST00000546814 SETD1AO15047 1707 aaKnown RBP10.53□□□□□ -0.72
LETMD1-204ENST00000546814 ATF3P18847 181 aa10.52□□□□□ -0.73
LETMD1-204ENST00000546814 RXRBP28702 533 aa10.52□□□□□ -0.73
LETMD1-204ENST00000546814 CHIC2Q9UKJ5 165 aa10.52□□□□□ -0.73
LETMD1-204ENST00000546814 TRPM2O94759 1503 aa10.52□□□□□ -0.73
LETMD1-204ENST00000546814 SETBP1Q9Y6X0 1596 aa10.52□□□□□ -0.73
LETMD1-204ENST00000546814 PTPRUQ92729 1446 aa10.51□□□□□ -0.73
LETMD1-204ENST00000546814 LOC105371045A0A1W2PR82 267 aa10.51□□□□□ -0.73
LETMD1-204ENST00000546814 PPP1R15AO75807 674 aaPredicted RBP10.51□□□□□ -0.73
LETMD1-204ENST00000546814 MYO5BQ9ULV0 1848 aa10.51□□□□□ -0.73
LETMD1-204ENST00000546814 XRN1Q8IZH2 1706 aaKnown RBP10.5□□□□□ -0.73
LETMD1-204ENST00000546814 AMOTL2Q9Y2J4 779 aa10.5□□□□□ -0.73
LETMD1-204ENST00000546814 LAMC1P11047 1609 aa10.5□□□□□ -0.73
LETMD1-204ENST00000546814 IQGAP3Q86VI3 1631 aa10.5□□□□□ -0.73
LETMD1-204ENST00000546814 MST1RQ04912 1400 aa10.5□□□□□ -0.73
LETMD1-204ENST00000546814 PRAG1Q86YV5 1406 aa10.5□□□□□ -0.73
LETMD1-204ENST00000546814 ASXL1Q8IXJ9 1541 aa10.49□□□□□ -0.73
LETMD1-204ENST00000546814 NHSL1Q5SYE7 1610 aa10.49□□□□□ -0.73
LETMD1-204ENST00000546814 LRRC59Q96AG4 307 aaKnown RBP10.49□□□□□ -0.73
LETMD1-204ENST00000546814 BCANQ96GW7 911 aa10.49□□□□□ -0.73
LETMD1-204ENST00000546814 E9PCH4 1651 aa10.49□□□□□ -0.73
LETMD1-204ENST00000546814 NRXN3Q9Y4C0 1643 aa10.48□□□□□ -0.73
LETMD1-204ENST00000546814 EP400Q96L91 3159 aa10.47□□□□□ -0.73
LETMD1-204ENST00000546814 ADGRL3Q9HAR2 1447 aa10.47□□□□□ -0.73
LETMD1-204ENST00000546814 RBM6P78332 1123 aaKnown RBP10.46□□□□□ -0.73
LETMD1-204ENST00000546814 MEX3CQ5U5Q3 659 aaKnown RBP10.46□□□□□ -0.73
LETMD1-204ENST00000546814 AFF2P51816 1311 aa10.46□□□□□ -0.73
LETMD1-204ENST00000546814 PNPLA6Q8IY17 1366 aa10.46□□□□□ -0.74
LETMD1-204ENST00000546814 C14orf37Q86TY3 774 aa10.45□□□□□ -0.74
LETMD1-204ENST00000546814 RGS12O14924 1447 aa10.44□□□□□ -0.74
LETMD1-204ENST00000546814 TRIM52Q96A61 297 aa10.44□□□□□ -0.74
LETMD1-204ENST00000546814 PTCH1Q13635 1447 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms