RNA–Protein interactions for RNA: ENST00000544891.6

NECAP1-207, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 4,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-207ENST00000544891 PLCH2O75038 1416 aa11.37□□□□□ -0.59
NECAP1-207ENST00000544891 ANKRD50Q9ULJ7 1429 aa11.37□□□□□ -0.59
NECAP1-207ENST00000544891 STK31Q9BXU1 1019 aa11.36□□□□□ -0.59
NECAP1-207ENST00000544891 KIF3BO15066 747 aa11.36□□□□□ -0.59
NECAP1-207ENST00000544891 ABCA9Q8IUA7 1624 aa11.35□□□□□ -0.59
NECAP1-207ENST00000544891 ABCC1P33527 1531 aa11.35□□□□□ -0.59
NECAP1-207ENST00000544891 WDR7Q9Y4E6 1490 aa11.35□□□□□ -0.59
NECAP1-207ENST00000544891 GBP4Q96PP9 640 aa11.35□□□□□ -0.59
NECAP1-207ENST00000544891 ERCC6L2Q5T890 1561 aa11.35□□□□□ -0.59
NECAP1-207ENST00000544891 POLR1AO95602 1720 aaPredicted RBP11.35□□□□□ -0.59
NECAP1-207ENST00000544891 PZPP20742 1482 aa11.35□□□□□ -0.59
NECAP1-207ENST00000544891 TRHP20396 242 aaPredicted RBP11.35□□□□□ -0.59
NECAP1-207ENST00000544891 MBD5Q9P267 1494 aa11.35□□□□□ -0.59
NECAP1-207ENST00000544891 SYCP2Q9BX26 1530 aa11.35□□□□□ -0.59
NECAP1-207ENST00000544891 CHAF1AQ13111 956 aaPredicted RBP11.35□□□□□ -0.59
NECAP1-207ENST00000544891 MLECQ14165 292 aa11.35□□□□□ -0.59
NECAP1-207ENST00000544891 B4GALNT3Q6L9W6 998 aa11.35□□□□□ -0.59
NECAP1-207ENST00000544891 ARHGEF12Q9NZN5 1544 aa11.34□□□□□ -0.59
NECAP1-207ENST00000544891 IQGAP3Q86VI3 1631 aa11.34□□□□□ -0.59
NECAP1-207ENST00000544891 RTEL1-TNFRSF6BF6WH68 1400 aa11.34□□□□□ -0.59
NECAP1-207ENST00000544891 CCDC34Q96HJ3 373 aa11.34□□□□□ -0.59
NECAP1-207ENST00000544891 ANKRD30BQ9BXX2 1392 aa11.34□□□□□ -0.59
NECAP1-207ENST00000544891 EIF2AK4Q9P2K8 1649 aaKnown RBP11.33□□□□□ -0.6
NECAP1-207ENST00000544891 CHMP4CQ96CF2 233 aa11.33□□□□□ -0.6
NECAP1-207ENST00000544891 GPATCH3Q96I76 525 aa11.33□□□□□ -0.6
NECAP1-207ENST00000544891 KIF15Q9NS87 1388 aa11.33□□□□□ -0.6
NECAP1-207ENST00000544891 L3MBTL2Q969R5 705 aa11.32□□□□□ -0.6
NECAP1-207ENST00000544891 WASHC2CQ9Y4E1 1318 aa11.32□□□□□ -0.6
NECAP1-207ENST00000544891 DENND4BO75064 1496 aaPredicted RBP11.32□□□□□ -0.6
NECAP1-207ENST00000544891 TEX14Q8IWB6 1497 aa11.32□□□□□ -0.6
NECAP1-207ENST00000544891 STK26Q9P289 416 aa11.32□□□□□ -0.6
NECAP1-207ENST00000544891 SYAP1Q96A49 352 aaPredicted RBP11.31□□□□□ -0.6
NECAP1-207ENST00000544891 CCDC144AA2RUR9 1427 aa11.31□□□□□ -0.6
NECAP1-207ENST00000544891 VGFO15240 615 aaPredicted RBP11.31□□□□□ -0.6
NECAP1-207ENST00000544891 HMGB1P09429 215 aaKnown RBP11.3□□□□□ -0.6
NECAP1-207ENST00000544891 ZNF644Q9H582 1327 aaPredicted RBP11.3□□□□□ -0.6
NECAP1-207ENST00000544891 MAGI2Q86UL8 1455 aa11.3□□□□□ -0.6
NECAP1-207ENST00000544891 FAM135AQ9P2D6 1515 aa11.29□□□□□ -0.6
NECAP1-207ENST00000544891 CSPP1Q1MSJ5 1256 aa11.29□□□□□ -0.6
NECAP1-207ENST00000544891 SAFB2Q14151 953 aaKnown RBP eCLIP11.29□□□□□ -0.6
NECAP1-207ENST00000544891 NAP1L2Q9ULW6 460 aaPredicted RBP11.28□□□□□ -0.6
NECAP1-207ENST00000544891 CSB-PGBD3P0DP91 1061 aa11.28□□□□□ -0.6
NECAP1-207ENST00000544891 MYBBP1AQ9BQG0 1328 aaKnown RBP11.28□□□□□ -0.6
NECAP1-207ENST00000544891 KIF3AQ9Y496 699 aa11.28□□□□□ -0.6
NECAP1-207ENST00000544891 CENPJQ9HC77 1338 aaPredicted RBP11.27□□□□□ -0.61
NECAP1-207ENST00000544891 PLCB2Q00722 1185 aa11.27□□□□□ -0.61
NECAP1-207ENST00000544891 MSNP26038 577 aaKnown RBP11.27□□□□□ -0.61
NECAP1-207ENST00000544891 HNRNPMP52272 730 aaKnown RBP eCLIP11.27□□□□□ -0.61
NECAP1-207ENST00000544891 ITPRIPQ8IWB1 547 aa11.27□□□□□ -0.61
NECAP1-207ENST00000544891 INO80Q9ULG1 1556 aaPredicted RBP11.26□□□□□ -0.61
NECAP1-207ENST00000544891 UHRF1BP1Q6BDS2 1440 aa11.26□□□□□ -0.61
NECAP1-207ENST00000544891 TMX4Q9H1E5 349 aaPredicted RBP11.26□□□□□ -0.61
NECAP1-207ENST00000544891 SMC4Q9NTJ3 1288 aa11.26□□□□□ -0.61
NECAP1-207ENST00000544891 LAMC1P11047 1609 aa11.26□□□□□ -0.61
NECAP1-207ENST00000544891 DEPDC5O75140 1603 aa11.26□□□□□ -0.61
NECAP1-207ENST00000544891 PODXL2Q9NZ53 605 aa11.26□□□□□ -0.61
NECAP1-207ENST00000544891 GNL2Q13823 731 aaKnown RBP11.25□□□□□ -0.61
NECAP1-207ENST00000544891 NGDNQ8NEJ9 315 aaKnown RBP11.25□□□□□ -0.61
NECAP1-207ENST00000544891 ZFYVE16Q7Z3T8 1539 aa11.25□□□□□ -0.61
NECAP1-207ENST00000544891 EVC2Q86UK5 1308 aa11.25□□□□□ -0.61
NECAP1-207ENST00000544891 PAK3O75914 559 aaPredicted RBP11.25□□□□□ -0.61
NECAP1-207ENST00000544891 OSCARQ8IYS5 282 aa11.25□□□□□ -0.61
NECAP1-207ENST00000544891 NEURL4Q96JN8 1562 aa11.25□□□□□ -0.61
NECAP1-207ENST00000544891 SOX12O15370 315 aa11.25□□□□□ -0.61
NECAP1-207ENST00000544891 FOXD1Q16676 465 aa11.24□□□□□ -0.61
NECAP1-207ENST00000544891 CGNL1Q0VF96 1302 aa11.24□□□□□ -0.61
NECAP1-207ENST00000544891 NAP1L5Q96NT1 182 aaPredicted RBP11.24□□□□□ -0.61
NECAP1-207ENST00000544891 TPM4P67936 248 aa11.23□□□□□ -0.61
NECAP1-207ENST00000544891 AAMPQ13685 434 aa11.23□□□□□ -0.61
NECAP1-207ENST00000544891 AMPHP49418 695 aa11.23□□□□□ -0.61
NECAP1-207ENST00000544891 KIAA2012Q0VF49 1180 aa11.23□□□□□ -0.61
NECAP1-207ENST00000544891 RALGAPBQ86X10 1494 aa11.23□□□□□ -0.61
NECAP1-207ENST00000544891 SENP3-EIF4A1A0A087X0R7 540 aa11.23□□□□□ -0.61
NECAP1-207ENST00000544891 ATP10AO60312 1499 aa11.22□□□□□ -0.61
NECAP1-207ENST00000544891 ATP7AQ04656 1500 aa11.22□□□□□ -0.61
NECAP1-207ENST00000544891 RBM19Q9Y4C8 960 aaKnown RBP11.22□□□□□ -0.61
NECAP1-207ENST00000544891 E9PSI1 815 aa11.22□□□□□ -0.61
NECAP1-207ENST00000544891 GORABQ5T7V8 394 aa11.22□□□□□ -0.61
NECAP1-207ENST00000544891 TET3O43151 1660 aa11.22□□□□□ -0.61
NECAP1-207ENST00000544891 BCORL1Q5H9F3 1711 aa11.22□□□□□ -0.61
NECAP1-207ENST00000544891 LRRFIP1Q32MZ4 808 aaKnown RBP11.21□□□□□ -0.61
NECAP1-207ENST00000544891 FANCAO15360 1455 aa11.21□□□□□ -0.61
NECAP1-207ENST00000544891 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.21□□□□□ -0.62
NECAP1-207ENST00000544891 TULP1O00294 542 aaPredicted RBP11.2□□□□□ -0.62
NECAP1-207ENST00000544891 ASXL2Q76L83 1435 aa11.2□□□□□ -0.62
NECAP1-207ENST00000544891 TAF7LQ5H9L4 462 aa11.2□□□□□ -0.62
NECAP1-207ENST00000544891 ST18O60284 1047 aa11.2□□□□□ -0.62
NECAP1-207ENST00000544891 CENPQQ7L2Z9 268 aaPredicted RBP11.2□□□□□ -0.62
NECAP1-207ENST00000544891 CEP152O94986 1710 aa11.19□□□□□ -0.62
NECAP1-207ENST00000544891 PHF14O94880 888 aa11.19□□□□□ -0.62
NECAP1-207ENST00000544891 DRC7Q8IY82 874 aa11.19□□□□□ -0.62
NECAP1-207ENST00000544891 KDM5CP41229 1560 aa11.19□□□□□ -0.62
NECAP1-207ENST00000544891 ADGRL1O94910 1474 aa11.19□□□□□ -0.62
NECAP1-207ENST00000544891 COG3Q96JB2 828 aa11.19□□□□□ -0.62
NECAP1-207ENST00000544891 ST20-MTHFSA0A0A6YYL1 179 aa11.18□□□□□ -0.62
NECAP1-207ENST00000544891 USP35Q9P2H5 1018 aa11.18□□□□□ -0.62
NECAP1-207ENST00000544891 GLI2P10070 1586 aa11.18□□□□□ -0.62
NECAP1-207ENST00000544891 ZNF518AQ6AHZ1 1483 aa11.18□□□□□ -0.62
NECAP1-207ENST00000544891 ZBED9Q6R2W3 1325 aa11.18□□□□□ -0.62
NECAP1-207ENST00000544891 TRPM2O94759 1503 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms