RNA–Protein interactions for RNA: ENST00000544752.6

GPHN-205, Transcript of gephyrin, humanhuman

TSL 2

Gene GPHN, Length 2,514 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-205ENST00000544752 CCNB3Q8WWL7 1395 aa8.45□□□□□ -1.06
GPHN-205ENST00000544752 SETD1BQ9UPS6 1966 aaKnown RBP8.45□□□□□ -1.06
GPHN-205ENST00000544752 ARHGEF5Q12774 1597 aa8.45□□□□□ -1.06
GPHN-205ENST00000544752 YEATS2Q9ULM3 1422 aa8.45□□□□□ -1.06
GPHN-205ENST00000544752 CHRM1P11229 460 aaPredicted RBP8.45□□□□□ -1.06
GPHN-205ENST00000544752 TRIM66O15016 1216 aa8.44□□□□□ -1.06
GPHN-205ENST00000544752 MFRPQ9BY79 579 aa8.44□□□□□ -1.06
GPHN-205ENST00000544752 SIGLEC1Q9BZZ2 1709 aa8.44□□□□□ -1.06
GPHN-205ENST00000544752 RAD21O60216 631 aa8.44□□□□□ -1.06
GPHN-205ENST00000544752 PLXNC1O60486 1568 aa8.44□□□□□ -1.06
GPHN-205ENST00000544752 PREX1Q8TCU6 1659 aa8.43□□□□□ -1.06
GPHN-205ENST00000544752 PLEKHG3A1L390 1219 aa8.43□□□□□ -1.06
GPHN-205ENST00000544752 ATP7AQ04656 1500 aa8.43□□□□□ -1.06
GPHN-205ENST00000544752 MAST1Q9Y2H9 1570 aa8.42□□□□□ -1.06
GPHN-205ENST00000544752 ZNF316A6NFI3 1004 aaPredicted RBP8.42□□□□□ -1.06
GPHN-205ENST00000544752 ONECUT3O60422 494 aaPredicted RBP8.42□□□□□ -1.06
GPHN-205ENST00000544752 KRI1Q8N9T8 703 aaKnown RBP8.42□□□□□ -1.06
GPHN-205ENST00000544752 TRAPPC8Q9Y2L5 1435 aa8.42□□□□□ -1.06
GPHN-205ENST00000544752 MIA2Q96PC5 1412 aa8.42□□□□□ -1.06
GPHN-205ENST00000544752 SYCP2Q9BX26 1530 aa8.41□□□□□ -1.06
GPHN-205ENST00000544752 MNX1P50219 401 aaPredicted RBP8.41□□□□□ -1.06
GPHN-205ENST00000544752 LRRC9Q6ZRR7 1453 aa8.41□□□□□ -1.06
GPHN-205ENST00000544752 ARID4BQ4LE39 1312 aaPredicted RBP8.41□□□□□ -1.06
GPHN-205ENST00000544752 MLLT3P42568 568 aaPredicted RBP8.41□□□□□ -1.06
GPHN-205ENST00000544752 CFDP1Q9UEE9 299 aaPredicted RBP8.41□□□□□ -1.06
GPHN-205ENST00000544752 MBD5Q9P267 1494 aa8.41□□□□□ -1.06
GPHN-205ENST00000544752 NPATQ14207 1427 aa8.4□□□□□ -1.06
GPHN-205ENST00000544752 AEBP1Q8IUX7 1158 aa8.4□□□□□ -1.06
GPHN-205ENST00000544752 RGS22Q8NE09 1264 aa8.4□□□□□ -1.06
GPHN-205ENST00000544752 MTMR7Q9Y216 660 aa8.4□□□□□ -1.06
GPHN-205ENST00000544752 NCOA2Q15596 1464 aa8.4□□□□□ -1.06
GPHN-205ENST00000544752 GPIHBP1Q8IV16 184 aa8.39□□□□□ -1.07
GPHN-205ENST00000544752 SPAG9O60271 1321 aaKnown RBP8.39□□□□□ -1.07
GPHN-205ENST00000544752 CCDC141Q6ZP82 1450 aa8.39□□□□□ -1.07
GPHN-205ENST00000544752 AFAP1Q8N556 730 aa8.39□□□□□ -1.07
GPHN-205ENST00000544752 NCKAP5LQ9HCH0 1330 aa8.39□□□□□ -1.07
GPHN-205ENST00000544752 A2MP01023 1474 aa8.38□□□□□ -1.07
GPHN-205ENST00000544752 C3P01024 1663 aa8.38□□□□□ -1.07
GPHN-205ENST00000544752 EIF2AK4Q9P2K8 1649 aaKnown RBP8.38□□□□□ -1.07
GPHN-205ENST00000544752 FOXD4L5Q5VV16 416 aaPredicted RBP8.38□□□□□ -1.07
GPHN-205ENST00000544752 FOXD4L4Q8WXT5 416 aaPredicted RBP8.38□□□□□ -1.07
GPHN-205ENST00000544752 TRAK2O60296 914 aa8.37□□□□□ -1.07
GPHN-205ENST00000544752 CAMSAP2Q08AD1 1489 aa8.37□□□□□ -1.07
GPHN-205ENST00000544752 SMYD5Q6GMV2 418 aa8.36□□□□□ -1.07
GPHN-205ENST00000544752 SHANK2Q9UPX8 1470 aa8.36□□□□□ -1.07
GPHN-205ENST00000544752 DHX29Q7Z478 1369 aaKnown RBP8.36□□□□□ -1.07
GPHN-205ENST00000544752 ZNF142P52746 1687 aaPredicted RBP8.36□□□□□ -1.07
GPHN-205ENST00000544752 ZC3H13Q5T200 1668 aaKnown RBP8.36□□□□□ -1.07
GPHN-205ENST00000544752 RNF17Q9BXT8 1623 aaKnown RBP8.35□□□□□ -1.07
GPHN-205ENST00000544752 MYOM3Q5VTT5 1437 aa8.35□□□□□ -1.07
GPHN-205ENST00000544752 TCOF1Q13428 1488 aaKnown RBP8.34□□□□□ -1.07
GPHN-205ENST00000544752 CROCC2H7BZ55 1655 aa8.34□□□□□ -1.07
GPHN-205ENST00000544752 FLIIQ13045 1269 aa8.34□□□□□ -1.07
GPHN-205ENST00000544752 HNRNPMP52272 730 aaKnown RBP eCLIP8.33□□□□□ -1.08
GPHN-205ENST00000544752 ZNF777Q9ULD5 760 aaPredicted RBP8.33□□□□□ -1.08
GPHN-205ENST00000544752 UHRF1BP1Q6BDS2 1440 aa8.33□□□□□ -1.08
GPHN-205ENST00000544752 KDM5DQ9BY66 1539 aa8.33□□□□□ -1.08
GPHN-205ENST00000544752 PTPRTO14522 1441 aa8.33□□□□□ -1.08
GPHN-205ENST00000544752 RNF39Q9H2S5 420 aa8.33□□□□□ -1.08
GPHN-205ENST00000544752 ESF1Q9H501 851 aaKnown RBP8.33□□□□□ -1.08
GPHN-205ENST00000544752 TRAIPQ9BWF2 469 aa8.32□□□□□ -1.08
GPHN-205ENST00000544752 CLTCQ00610 1675 aaKnown RBP8.32□□□□□ -1.08
GPHN-205ENST00000544752 RBM25P49756 843 aaKnown RBP8.32□□□□□ -1.08
GPHN-205ENST00000544752 DUOX2Q9NRD8 1548 aa8.31□□□□□ -1.08
GPHN-205ENST00000544752 LARP6Q9BRS8 491 aaKnown RBP8.31□□□□□ -1.08
GPHN-205ENST00000544752 TSPY4P0CV99 314 aa8.31□□□□□ -1.08
GPHN-205ENST00000544752 TSPY10P0CW01 314 aa8.31□□□□□ -1.08
GPHN-205ENST00000544752 CREBZFQ9NS37 354 aa8.31□□□□□ -1.08
GPHN-205ENST00000544752 MYT1LQ9UL68 1186 aa8.31□□□□□ -1.08
GPHN-205ENST00000544752 PLA2R1Q13018 1463 aa8.31□□□□□ -1.08
GPHN-205ENST00000544752 IQSEC2Q5JU85 1478 aa8.31□□□□□ -1.08
GPHN-205ENST00000544752 DNMT1P26358 1616 aaKnown RBP8.3□□□□□ -1.08
GPHN-205ENST00000544752 EIF5BO60841 1220 aaKnown RBP8.3□□□□□ -1.08
GPHN-205ENST00000544752 PTPN23Q9H3S7 1636 aa8.3□□□□□ -1.08
GPHN-205ENST00000544752 PTPRKQ15262 1439 aa8.3□□□□□ -1.08
GPHN-205ENST00000544752 STRCQ7RTU9 1775 aa8.3□□□□□ -1.08
GPHN-205ENST00000544752 ZMYM3Q14202 1370 aa8.3□□□□□ -1.08
GPHN-205ENST00000544752 A6NJR5 290 aa8.3□□□□□ -1.08
GPHN-205ENST00000544752 DSG3P32926 999 aa8.29□□□□□ -1.08
GPHN-205ENST00000544752 ERBINQ96RT1 1412 aa8.29□□□□□ -1.08
GPHN-205ENST00000544752 PZPP20742 1482 aa8.29□□□□□ -1.08
GPHN-205ENST00000544752 MFAP1P55081 439 aaKnown RBP8.29□□□□□ -1.08
GPHN-205ENST00000544752 RETREG2Q8NC44 543 aa8.29□□□□□ -1.08
GPHN-205ENST00000544752 MYO3AQ8NEV4 1616 aa8.28□□□□□ -1.08
GPHN-205ENST00000544752 DEPDC5O75140 1603 aa8.28□□□□□ -1.08
GPHN-205ENST00000544752 IRF5Q13568 498 aa8.28□□□□□ -1.08
GPHN-205ENST00000544752 GZF1Q9H116 711 aaPredicted RBP8.28□□□□□ -1.08
GPHN-205ENST00000544752 NLRP1Q9C000 1473 aa8.28□□□□□ -1.08
GPHN-205ENST00000544752 KDM5AP29375 1690 aaKnown RBP8.28□□□□□ -1.08
GPHN-205ENST00000544752 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.27□□□□□ -1.08
GPHN-205ENST00000544752 A2ML1A8K2U0 1454 aa8.27□□□□□ -1.09
GPHN-205ENST00000544752 ADGRL2O95490 1459 aa8.27□□□□□ -1.09
GPHN-205ENST00000544752 TMCO4Q5TGY1 634 aa8.27□□□□□ -1.09
GPHN-205ENST00000544752 PARP9Q8IXQ6 854 aa8.27□□□□□ -1.09
GPHN-205ENST00000544752 FBXO22Q8NEZ5 403 aa8.27□□□□□ -1.09
GPHN-205ENST00000544752 POM121Q96HA1 1249 aa8.27□□□□□ -1.09
GPHN-205ENST00000544752 PCDHB8Q9UN66 801 aa8.27□□□□□ -1.09
GPHN-205ENST00000544752 PCDHB13Q9Y5F0 798 aa8.27□□□□□ -1.09
GPHN-205ENST00000544752 ZNF644Q9H582 1327 aaPredicted RBP8.27□□□□□ -1.09
GPHN-205ENST00000544752 NCOA1Q15788 1441 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms