RNA–Protein interactions for RNA: ENST00000544432.5

VAMP1-208, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3

Gene VAMP1, Length 759 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-208ENST00000544432 KCNA6P17658 529 aa20.87■□□□□ 0.93
VAMP1-208ENST00000544432 SLC26A8Q96RN1 970 aa20.87■□□□□ 0.93
VAMP1-208ENST00000544432 STRCP1A6NGW2 1772 aa20.87■□□□□ 0.93
VAMP1-208ENST00000544432 ACIN1Q9UKV3 1341 aaKnown RBP20.86■□□□□ 0.93
VAMP1-208ENST00000544432 PPP1R15AO75807 674 aaPredicted RBP20.86■□□□□ 0.93
VAMP1-208ENST00000544432 SPHKAPQ2M3C7 1700 aa20.86■□□□□ 0.93
VAMP1-208ENST00000544432 MYO5BQ9ULV0 1848 aa20.85■□□□□ 0.93
VAMP1-208ENST00000544432 SLC4A1APQ9BWU0 796 aaKnown RBP20.85■□□□□ 0.93
VAMP1-208ENST00000544432 TBX22Q9Y458 520 aa20.84■□□□□ 0.93
VAMP1-208ENST00000544432 BCANQ96GW7 911 aa20.83■□□□□ 0.93
VAMP1-208ENST00000544432 TRPM2O94759 1503 aa20.83■□□□□ 0.92
VAMP1-208ENST00000544432 ADAMTS13Q76LX8 1427 aa20.78■□□□□ 0.92
VAMP1-208ENST00000544432 SETD5Q9C0A6 1442 aa20.78■□□□□ 0.92
VAMP1-208ENST00000544432 NUTM2DQ5VT03 806 aaPredicted RBP20.77■□□□□ 0.92
VAMP1-208ENST00000544432 NWD1Q149M9 1564 aa20.76■□□□□ 0.91
VAMP1-208ENST00000544432 NKTRP30414 1462 aaKnown RBP20.76■□□□□ 0.91
VAMP1-208ENST00000544432 PIK3R4Q99570 1358 aa20.76■□□□□ 0.91
VAMP1-208ENST00000544432 CLTCL1P53675 1640 aa20.76■□□□□ 0.91
VAMP1-208ENST00000544432 ZNF326Q5BKZ1 582 aaKnown RBP20.76■□□□□ 0.91
VAMP1-208ENST00000544432 PROSER2Q86WR7 435 aaPredicted RBP20.76■□□□□ 0.91
VAMP1-208ENST00000544432 MPHOSPH9Q99550 1183 aa20.75■□□□□ 0.91
VAMP1-208ENST00000544432 DIP2AQ14689 1571 aa20.75■□□□□ 0.91
VAMP1-208ENST00000544432 ALKQ9UM73 1620 aa20.75■□□□□ 0.91
VAMP1-208ENST00000544432 TMEM94Q12767 1356 aa20.74■□□□□ 0.91
VAMP1-208ENST00000544432 PIP4K2BP78356 416 aa20.74■□□□□ 0.91
VAMP1-208ENST00000544432 RPGRIP1LQ68CZ1 1315 aa20.72■□□□□ 0.91
VAMP1-208ENST00000544432 SCAF1Q9H7N4 1312 aaKnown RBP20.72■□□□□ 0.91
VAMP1-208ENST00000544432 SENP3Q9H4L4 574 aaPredicted RBP20.71■□□□□ 0.91
VAMP1-208ENST00000544432 CHD2O14647 1828 aaKnown RBP20.71■□□□□ 0.91
VAMP1-208ENST00000544432 XIRP1Q702N8 1843 aaKnown RBP20.7■□□□□ 0.9
VAMP1-208ENST00000544432 NCOA3Q9Y6Q9 1424 aa20.7■□□□□ 0.9
VAMP1-208ENST00000544432 KIF1BO60333 1816 aa20.69■□□□□ 0.9
VAMP1-208ENST00000544432 SETBP1Q9Y6X0 1596 aa20.69■□□□□ 0.9
VAMP1-208ENST00000544432 FOXD1Q16676 465 aa20.69■□□□□ 0.9
VAMP1-208ENST00000544432 NEXMIFQ5QGS0 1516 aa20.68■□□□□ 0.9
VAMP1-208ENST00000544432 VGFO15240 615 aaPredicted RBP20.68■□□□□ 0.9
VAMP1-208ENST00000544432 HRCP23327 699 aa20.68■□□□□ 0.9
VAMP1-208ENST00000544432 HSPA1LP34931 641 aa20.68■□□□□ 0.9
VAMP1-208ENST00000544432 RAB3GAP2Q9H2M9 1393 aa20.67■□□□□ 0.9
VAMP1-208ENST00000544432 CCDC144AA2RUR9 1427 aa20.65■□□□□ 0.9
VAMP1-208ENST00000544432 AMOTL2Q9Y2J4 779 aa20.65■□□□□ 0.9
VAMP1-208ENST00000544432 NRXN3Q9Y4C0 1643 aa20.64■□□□□ 0.9
VAMP1-208ENST00000544432 MSH6P52701 1360 aa20.64■□□□□ 0.89
VAMP1-208ENST00000544432 RBM33Q96EV2 1170 aaKnown RBP20.64■□□□□ 0.89
VAMP1-208ENST00000544432 FAM135BQ49AJ0 1406 aa20.63■□□□□ 0.89
VAMP1-208ENST00000544432 PTPRUQ92729 1446 aa20.63■□□□□ 0.89
VAMP1-208ENST00000544432 SPATA31E1Q6ZUB1 1445 aa20.61■□□□□ 0.89
VAMP1-208ENST00000544432 METP08581 1390 aa20.6■□□□□ 0.89
VAMP1-208ENST00000544432 C19orf44Q9H6X5 657 aa20.59■□□□□ 0.89
VAMP1-208ENST00000544432 SLAIN2Q9P270 581 aa20.57■□□□□ 0.88
VAMP1-208ENST00000544432 ANKRD30BQ9BXX2 1392 aa20.56■□□□□ 0.88
VAMP1-208ENST00000544432 DISP3Q9P2K9 1392 aa20.56■□□□□ 0.88
VAMP1-208ENST00000544432 XRN1Q8IZH2 1706 aaKnown RBP20.56■□□□□ 0.88
VAMP1-208ENST00000544432 RGL3Q3MIN7 710 aa20.55■□□□□ 0.88
VAMP1-208ENST00000544432 C14orf37Q86TY3 774 aa20.55■□□□□ 0.88
VAMP1-208ENST00000544432 CADPS2Q86UW7 1296 aa20.55■□□□□ 0.88
VAMP1-208ENST00000544432 PPLO60437 1756 aa20.54■□□□□ 0.88
VAMP1-208ENST00000544432 ATF3P18847 181 aa20.52■□□□□ 0.88
VAMP1-208ENST00000544432 ADGRF5Q8IZF2 1346 aa20.52■□□□□ 0.87
VAMP1-208ENST00000544432 DCCP43146 1447 aa20.51■□□□□ 0.87
VAMP1-208ENST00000544432 PRAG1Q86YV5 1406 aa20.51■□□□□ 0.87
VAMP1-208ENST00000544432 SETD1AO15047 1707 aaKnown RBP20.49■□□□□ 0.87
VAMP1-208ENST00000544432 ROBO1Q9Y6N7 1651 aa20.48■□□□□ 0.87
VAMP1-208ENST00000544432 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.48■□□□□ 0.87
VAMP1-208ENST00000544432 PTCH1Q13635 1447 aa20.48■□□□□ 0.87
VAMP1-208ENST00000544432 IFT172Q9UG01 1749 aa20.45■□□□□ 0.86
VAMP1-208ENST00000544432 PIK3C2GO75747 1445 aa20.44■□□□□ 0.86
VAMP1-208ENST00000544432 ADGRL3Q9HAR2 1447 aa20.44■□□□□ 0.86
VAMP1-208ENST00000544432 ROBO2Q9HCK4 1378 aa20.44■□□□□ 0.86
VAMP1-208ENST00000544432 MED1Q15648 1581 aaPredicted RBP20.42■□□□□ 0.86
VAMP1-208ENST00000544432 STAC3Q96MF2 364 aa20.42■□□□□ 0.86
VAMP1-208ENST00000544432 C14orf93Q9H972 538 aaKnown RBP20.42■□□□□ 0.86
VAMP1-208ENST00000544432 MYOM2P54296 1465 aa20.42■□□□□ 0.86
VAMP1-208ENST00000544432 NRXN1Q9ULB1 1477 aa20.42■□□□□ 0.86
VAMP1-208ENST00000544432 TECPR2O15040 1411 aa20.4■□□□□ 0.86
VAMP1-208ENST00000544432 LRPPRCP42704 1394 aaKnown RBP20.4■□□□□ 0.86
VAMP1-208ENST00000544432 MST1RQ04912 1400 aa20.4■□□□□ 0.86
VAMP1-208ENST00000544432 ABCC11Q96J66 1382 aa20.4■□□□□ 0.86
VAMP1-208ENST00000544432 BRINP3Q76B58 766 aa20.39■□□□□ 0.85
VAMP1-208ENST00000544432 ILDR2Q71H61 639 aa20.38■□□□□ 0.85
VAMP1-208ENST00000544432 SIRT1Q96EB6 747 aa20.37■□□□□ 0.85
VAMP1-208ENST00000544432 AHDC1Q5TGY3 1603 aaPredicted RBP20.36■□□□□ 0.85
VAMP1-208ENST00000544432 TMEM132EQ6IEE7 984 aa20.36■□□□□ 0.85
VAMP1-208ENST00000544432 JCADQ9P266 1359 aa20.35■□□□□ 0.85
VAMP1-208ENST00000544432 STK26Q9P289 416 aa20.35■□□□□ 0.85
VAMP1-208ENST00000544432 PHLPP1O60346 1717 aa20.35■□□□□ 0.85
VAMP1-208ENST00000544432 NALCNQ8IZF0 1738 aa20.35■□□□□ 0.85
VAMP1-208ENST00000544432 ASXL1Q8IXJ9 1541 aa20.34■□□□□ 0.85
VAMP1-208ENST00000544432 CFAP70Q5T0N1 1121 aa20.34■□□□□ 0.85
VAMP1-208ENST00000544432 YTHDC2Q9H6S0 1430 aaKnown RBP20.34■□□□□ 0.85
VAMP1-208ENST00000544432 DHX57Q6P158 1386 aaKnown RBP20.33■□□□□ 0.84
VAMP1-208ENST00000544432 C1orf167Q5SNV9 1468 aa20.32■□□□□ 0.84
VAMP1-208ENST00000544432 COL16A1Q07092 1604 aaPredicted RBP20.32■□□□□ 0.84
VAMP1-208ENST00000544432 DCAF11Q8TEB1 546 aa20.32■□□□□ 0.84
VAMP1-208ENST00000544432 WAPLQ7Z5K2 1190 aa20.31■□□□□ 0.84
VAMP1-208ENST00000544432 PHF23Q9BUL5 403 aaPredicted RBP20.31■□□□□ 0.84
VAMP1-208ENST00000544432 LAMC1P11047 1609 aa20.31■□□□□ 0.84
VAMP1-208ENST00000544432 KNDC1Q76NI1 1749 aa20.3■□□□□ 0.84
VAMP1-208ENST00000544432 KDM2AQ9Y2K7 1162 aa20.28■□□□□ 0.84
VAMP1-208ENST00000544432 SPATA31A6Q5VVP1 1343 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms