RNA–Protein interactions for RNA: ENST00000544001.6

ITFG1-204, Transcript of integrin alpha FG-GAP repeat containing 1, humanhuman

TSL 2 BASIC

Gene ITFG1, Length 1,849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITFG1-204ENST00000544001 NEO1Q92859 1461 aa18.29■□□□□ 0.52
ITFG1-204ENST00000544001 LRPPRCP42704 1394 aaKnown RBP18.28■□□□□ 0.52
ITFG1-204ENST00000544001 DIP2CQ9Y2E4 1556 aa18.28■□□□□ 0.52
ITFG1-204ENST00000544001 PNISRQ8TF01 805 aaKnown RBP18.28■□□□□ 0.52
ITFG1-204ENST00000544001 SIGLEC1Q9BZZ2 1709 aa18.27■□□□□ 0.52
ITFG1-204ENST00000544001 STAC3Q96MF2 364 aa18.27■□□□□ 0.52
ITFG1-204ENST00000544001 MYO3AQ8NEV4 1616 aa18.26■□□□□ 0.51
ITFG1-204ENST00000544001 TSHZ2Q9NRE2 1034 aa18.26■□□□□ 0.51
ITFG1-204ENST00000544001 PER1O15534 1290 aaPredicted RBP18.26■□□□□ 0.51
ITFG1-204ENST00000544001 TMF1P82094 1093 aa18.26■□□□□ 0.51
ITFG1-204ENST00000544001 TMC1Q8TDI8 760 aa18.25■□□□□ 0.51
ITFG1-204ENST00000544001 ABCC3O15438 1527 aa18.25■□□□□ 0.51
ITFG1-204ENST00000544001 SMG6Q86US8 1419 aaKnown RBP18.25■□□□□ 0.51
ITFG1-204ENST00000544001 ZC3H13Q5T200 1668 aaKnown RBP18.24■□□□□ 0.51
ITFG1-204ENST00000544001 NRXN1Q9ULB1 1477 aa18.24■□□□□ 0.51
ITFG1-204ENST00000544001 IRX6P78412 446 aaPredicted RBP18.23■□□□□ 0.51
ITFG1-204ENST00000544001 NPATQ14207 1427 aa18.22■□□□□ 0.51
ITFG1-204ENST00000544001 PIK3C2BO00750 1634 aa18.22■□□□□ 0.51
ITFG1-204ENST00000544001 WASHC2CQ9Y4E1 1318 aa18.21■□□□□ 0.5
ITFG1-204ENST00000544001 GLI2P10070 1586 aa18.19■□□□□ 0.5
ITFG1-204ENST00000544001 SETBP1Q9Y6X0 1596 aa18.19■□□□□ 0.5
ITFG1-204ENST00000544001 NLRP13Q86W25 1043 aa18.19■□□□□ 0.5
ITFG1-204ENST00000544001 EIF3AQ14152 1382 aaKnown RBP18.19■□□□□ 0.5
ITFG1-204ENST00000544001 PANK3Q9H999 370 aa18.19■□□□□ 0.5
ITFG1-204ENST00000544001 ERICH6BQ5W0A0 696 aa18.17■□□□□ 0.5
ITFG1-204ENST00000544001 MYO5BQ9ULV0 1848 aa18.17■□□□□ 0.5
ITFG1-204ENST00000544001 QRICH2Q9H0J4 1663 aa18.17■□□□□ 0.5
ITFG1-204ENST00000544001 ZMYM4Q5VZL5 1548 aa18.16■□□□□ 0.5
ITFG1-204ENST00000544001 ADGRF5Q8IZF2 1346 aa18.16■□□□□ 0.5
ITFG1-204ENST00000544001 NUDCQ9Y266 331 aa18.16■□□□□ 0.5
ITFG1-204ENST00000544001 NOS1P29475 1434 aa18.15■□□□□ 0.5
ITFG1-204ENST00000544001 ERVK-7P63135 1459 aa18.14■□□□□ 0.49
ITFG1-204ENST00000544001 CC2D1BQ5T0F9 858 aaKnown RBP18.14■□□□□ 0.49
ITFG1-204ENST00000544001 DIP2BQ9P265 1576 aa18.13■□□□□ 0.49
ITFG1-204ENST00000544001 ASXL1Q8IXJ9 1541 aa18.13■□□□□ 0.49
ITFG1-204ENST00000544001 TSPOAP1O95153 1857 aa18.13■□□□□ 0.49
ITFG1-204ENST00000544001 CFAP70Q5T0N1 1121 aa18.12■□□□□ 0.49
ITFG1-204ENST00000544001 PREX1Q8TCU6 1659 aa18.12■□□□□ 0.49
ITFG1-204ENST00000544001 RAPGEF3O95398 923 aa18.12■□□□□ 0.49
ITFG1-204ENST00000544001 GGT6Q6P531 493 aa18.12■□□□□ 0.49
ITFG1-204ENST00000544001 PIK3C2GO75747 1445 aa18.12■□□□□ 0.49
ITFG1-204ENST00000544001 BLMP54132 1417 aaPredicted RBP18.12■□□□□ 0.49
ITFG1-204ENST00000544001 ADGRB1O14514 1584 aa18.11■□□□□ 0.49
ITFG1-204ENST00000544001 SENP3-EIF4A1A0A087X0R7 540 aa18.11■□□□□ 0.49
ITFG1-204ENST00000544001 ARHGEF28Q8N1W1 1705 aaKnown RBP18.1■□□□□ 0.49
ITFG1-204ENST00000544001 CDCA8Q53HL2 280 aa18.1■□□□□ 0.49
ITFG1-204ENST00000544001 NEXMIFQ5QGS0 1516 aa18.1■□□□□ 0.49
ITFG1-204ENST00000544001 INSRP06213 1382 aa18.09■□□□□ 0.49
ITFG1-204ENST00000544001 YEATS2Q9ULM3 1422 aa18.09■□□□□ 0.49
ITFG1-204ENST00000544001 PPP4R2Q9NY27 417 aa18.09■□□□□ 0.49
ITFG1-204ENST00000544001 RNF123Q5XPI4 1314 aa18.08■□□□□ 0.49
ITFG1-204ENST00000544001 SBNO2Q9Y2G9 1366 aa18.07■□□□□ 0.48
ITFG1-204ENST00000544001 ARHGAP31Q2M1Z3 1444 aa18.07■□□□□ 0.48
ITFG1-204ENST00000544001 AMER1Q5JTC6 1135 aaPredicted RBP18.05■□□□□ 0.48
ITFG1-204ENST00000544001 CHGAP10645 457 aaKnown RBP18.05■□□□□ 0.48
ITFG1-204ENST00000544001 KNSTRNQ9Y448 316 aa18.04■□□□□ 0.48
ITFG1-204ENST00000544001 NPC1L1Q9UHC9 1359 aa18.04■□□□□ 0.48
ITFG1-204ENST00000544001 TMEM131LA2VDJ0 1609 aa18.02■□□□□ 0.47
ITFG1-204ENST00000544001 AEBP2Q6ZN18 517 aaPredicted RBP18.01■□□□□ 0.47
ITFG1-204ENST00000544001 RPGRIP1LQ68CZ1 1315 aa18.01■□□□□ 0.47
ITFG1-204ENST00000544001 REREQ9P2R6 1566 aa18.01■□□□□ 0.47
ITFG1-204ENST00000544001 SLC24A1O60721 1099 aa18■□□□□ 0.47
ITFG1-204ENST00000544001 PPP2R1AP30153 589 aa18■□□□□ 0.47
ITFG1-204ENST00000544001 USP32Q8NFA0 1604 aa18■□□□□ 0.47
ITFG1-204ENST00000544001 KIF13AQ9H1H9 1805 aa17.99■□□□□ 0.47
ITFG1-204ENST00000544001 C14orf93Q9H972 538 aaKnown RBP17.99■□□□□ 0.47
ITFG1-204ENST00000544001 CENPJQ9HC77 1338 aaPredicted RBP17.98■□□□□ 0.47
ITFG1-204ENST00000544001 B4GALNT3Q6L9W6 998 aa17.98■□□□□ 0.47
ITFG1-204ENST00000544001 CLTCQ00610 1675 aaKnown RBP17.97■□□□□ 0.47
ITFG1-204ENST00000544001 PDE3BQ13370 1112 aa17.97■□□□□ 0.47
ITFG1-204ENST00000544001 SALL2Q9Y467 1007 aaPredicted RBP17.96■□□□□ 0.47
ITFG1-204ENST00000544001 TULP4Q9NRJ4 1543 aa17.94■□□□□ 0.46
ITFG1-204ENST00000544001 SHPRHQ149N8 1683 aa17.94■□□□□ 0.46
ITFG1-204ENST00000544001 RBM19Q9Y4C8 960 aaKnown RBP17.94■□□□□ 0.46
ITFG1-204ENST00000544001 TRAK1Q9UPV9 953 aa17.93■□□□□ 0.46
ITFG1-204ENST00000544001 ZFYVE9O95405 1425 aa17.93■□□□□ 0.46
ITFG1-204ENST00000544001 AGLP35573 1532 aa17.93■□□□□ 0.46
ITFG1-204ENST00000544001 TMEM132EQ6IEE7 984 aa17.91■□□□□ 0.46
ITFG1-204ENST00000544001 CARD14Q9BXL6 1004 aa17.91■□□□□ 0.46
ITFG1-204ENST00000544001 ADAMTS8Q9UP79 889 aa17.91■□□□□ 0.46
ITFG1-204ENST00000544001 FAM69CQ0P6D2 419 aa17.91■□□□□ 0.46
ITFG1-204ENST00000544001 RRP1P56182 461 aaKnown RBP17.9■□□□□ 0.46
ITFG1-204ENST00000544001 CDCA7LQ96GN5 454 aa17.9■□□□□ 0.46
ITFG1-204ENST00000544001 IDI1Q13907 227 aa17.89■□□□□ 0.45
ITFG1-204ENST00000544001 RCAN3Q9UKA8 241 aa17.89■□□□□ 0.45
ITFG1-204ENST00000544001 ARHGEF40Q8TER5 1519 aa17.89■□□□□ 0.45
ITFG1-204ENST00000544001 WDR43Q15061 677 aaKnown RBP eCLIP17.88■□□□□ 0.458e-7■■■■□ 26.4
ITFG1-204ENST00000544001 NSD3Q9BZ95 1437 aa17.88■□□□□ 0.45
ITFG1-204ENST00000544001 VGFO15240 615 aaPredicted RBP17.88■□□□□ 0.45
ITFG1-204ENST00000544001 NUTM2DQ5VT03 806 aaPredicted RBP17.88■□□□□ 0.45
ITFG1-204ENST00000544001 SLC52A1Q9NWF4 448 aa17.88■□□□□ 0.45
ITFG1-204ENST00000544001 PLEKHH1Q9ULM0 1364 aa17.87■□□□□ 0.45
ITFG1-204ENST00000544001 SETD1AO15047 1707 aaKnown RBP17.87■□□□□ 0.45
ITFG1-204ENST00000544001 ANKRD26Q9UPS8 1709 aa17.86■□□□□ 0.45
ITFG1-204ENST00000544001 SPATA31D1Q6ZQQ2 1576 aa17.85■□□□□ 0.45
ITFG1-204ENST00000544001 PTPRMP28827 1452 aa17.85■□□□□ 0.45
ITFG1-204ENST00000544001 ALKQ9UM73 1620 aa17.83■□□□□ 0.45
ITFG1-204ENST00000544001 CCDC136Q96JN2 1154 aa17.82■□□□□ 0.44
ITFG1-204ENST00000544001 ZNF521Q96K83 1311 aa17.82■□□□□ 0.44
ITFG1-204ENST00000544001 POLR3AO14802 1390 aaPredicted RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms