RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 DEPDC5O75140 1603 aa19.69■□□□□ 0.74
DDX55-209ENST00000542286 MROH1Q8NDA8 1641 aa19.69■□□□□ 0.74
DDX55-209ENST00000542286 CEP152O94986 1710 aa19.69■□□□□ 0.74
DDX55-209ENST00000542286 RCAN3Q9UKA8 241 aa19.69■□□□□ 0.74
DDX55-209ENST00000542286 ARAP3Q8WWN8 1544 aa19.69■□□□□ 0.74
DDX55-209ENST00000542286 TET3O43151 1660 aa19.68■□□□□ 0.74
DDX55-209ENST00000542286 PPP2R1AP30153 589 aa19.68■□□□□ 0.74
DDX55-209ENST00000542286 AMER1Q5JTC6 1135 aaPredicted RBP19.68■□□□□ 0.74
DDX55-209ENST00000542286 TMEM132EQ6IEE7 984 aa19.68■□□□□ 0.74
DDX55-209ENST00000542286 SCAF11Q99590 1463 aaKnown RBP19.68■□□□□ 0.74
DDX55-209ENST00000542286 KIDINS220Q9ULH0 1771 aa19.67■□□□□ 0.74
DDX55-209ENST00000542286 RRP1P56182 461 aaKnown RBP19.67■□□□□ 0.74
DDX55-209ENST00000542286 CCDC146Q8IYE0 955 aa19.66■□□□□ 0.74
DDX55-209ENST00000542286 TRAK1Q9UPV9 953 aa19.66■□□□□ 0.74
DDX55-209ENST00000542286 IQGAP1P46940 1657 aa19.66■□□□□ 0.74
DDX55-209ENST00000542286 CD109Q6YHK3 1445 aa19.65■□□□□ 0.74
DDX55-209ENST00000542286 SKAP1Q86WV1 359 aa19.65■□□□□ 0.74
DDX55-209ENST00000542286 VWDEQ8N2E2 1590 aa19.64■□□□□ 0.73
DDX55-209ENST00000542286 PPRC1Q5VV67 1664 aaKnown RBP19.63■□□□□ 0.73
DDX55-209ENST00000542286 NOS1P29475 1434 aa19.63■□□□□ 0.73
DDX55-209ENST00000542286 TNNT2P45379 298 aaPredicted RBP19.62■□□□□ 0.73
DDX55-209ENST00000542286 MROH2AA6NES4 1674 aa19.62■□□□□ 0.73
DDX55-209ENST00000542286 CARD14Q9BXL6 1004 aa19.61■□□□□ 0.73
DDX55-209ENST00000542286 WASHC2CQ9Y4E1 1318 aa19.6■□□□□ 0.73
DDX55-209ENST00000542286 ABCA6Q8N139 1617 aa19.6■□□□□ 0.73
DDX55-209ENST00000542286 WDR43Q15061 677 aaKnown RBP eCLIP19.6■□□□□ 0.73
DDX55-209ENST00000542286 ZNF518AQ6AHZ1 1483 aa19.59■□□□□ 0.73
DDX55-209ENST00000542286 EFCAB6Q5THR3 1501 aa19.59■□□□□ 0.73
DDX55-209ENST00000542286 PLEKHH1Q9ULM0 1364 aa19.59■□□□□ 0.73
DDX55-209ENST00000542286 SAFB2Q14151 953 aaKnown RBP eCLIP19.58■□□□□ 0.73
DDX55-209ENST00000542286 NBR1Q14596 966 aa19.58■□□□□ 0.73
DDX55-209ENST00000542286 C20orf194Q5TEA3 1177 aa19.58■□□□□ 0.73
DDX55-209ENST00000542286 NPATQ14207 1427 aa19.58■□□□□ 0.73
DDX55-209ENST00000542286 BLMP54132 1417 aaPredicted RBP19.57■□□□□ 0.72
DDX55-209ENST00000542286 NOP58Q9Y2X3 529 aaKnown RBP19.57■□□□□ 0.72
DDX55-209ENST00000542286 ERVK-7P63135 1459 aa19.56■□□□□ 0.72
DDX55-209ENST00000542286 MYOM1P52179 1685 aa19.55■□□□□ 0.72
DDX55-209ENST00000542286 MAP3K4Q9Y6R4 1608 aa19.55■□□□□ 0.72
DDX55-209ENST00000542286 FRMPD1Q5SYB0 1578 aa19.55■□□□□ 0.72
DDX55-209ENST00000542286 CDCA8Q53HL2 280 aa19.55■□□□□ 0.72
DDX55-209ENST00000542286 SLC12A5Q9H2X9 1139 aa19.55■□□□□ 0.72
DDX55-209ENST00000542286 POGZQ7Z3K3 1410 aa19.55■□□□□ 0.72
DDX55-209ENST00000542286 EIF3AQ14152 1382 aaKnown RBP19.54■□□□□ 0.72
DDX55-209ENST00000542286 KIF1BO60333 1816 aa19.54■□□□□ 0.72
DDX55-209ENST00000542286 CYB5RLQ6IPT4 315 aa19.54■□□□□ 0.72
DDX55-209ENST00000542286 CRBNQ96SW2 442 aa19.53■□□□□ 0.72
DDX55-209ENST00000542286 SPINK5Q9NQ38 1064 aaPredicted RBP19.53■□□□□ 0.72
DDX55-209ENST00000542286 PAK3O75914 559 aaPredicted RBP19.52■□□□□ 0.72
DDX55-209ENST00000542286 ASXL1Q8IXJ9 1541 aa19.52■□□□□ 0.72
DDX55-209ENST00000542286 PDE3BQ13370 1112 aa19.52■□□□□ 0.72
DDX55-209ENST00000542286 ANO8Q9HCE9 1232 aaPredicted RBP19.52■□□□□ 0.72
DDX55-209ENST00000542286 APAF1O14727 1248 aa19.51■□□□□ 0.71
DDX55-209ENST00000542286 DMRT2Q9Y5R5 561 aa19.51■□□□□ 0.71
DDX55-209ENST00000542286 SYNMO15061 1565 aa19.51■□□□□ 0.71
DDX55-209ENST00000542286 CENPJQ9HC77 1338 aaPredicted RBP19.5■□□□□ 0.71
DDX55-209ENST00000542286 STK26Q9P289 416 aa19.49■□□□□ 0.71
DDX55-209ENST00000542286 KDM5AP29375 1690 aaKnown RBP19.48■□□□□ 0.71
DDX55-209ENST00000542286 MYOM2P54296 1465 aa19.48■□□□□ 0.71
DDX55-209ENST00000542286 STAC3Q96MF2 364 aa19.48■□□□□ 0.71
DDX55-209ENST00000542286 ZMYM4Q5VZL5 1548 aa19.47■□□□□ 0.71
DDX55-209ENST00000542286 NEUROD2Q15784 382 aa19.47■□□□□ 0.71
DDX55-209ENST00000542286 DUSP27Q5VZP5 1158 aa19.47■□□□□ 0.71
DDX55-209ENST00000542286 YEATS2Q9ULM3 1422 aa19.46■□□□□ 0.71
DDX55-209ENST00000542286 C14orf93Q9H972 538 aaKnown RBP19.45■□□□□ 0.7
DDX55-209ENST00000542286 ADGRB3O60242 1522 aa19.45■□□□□ 0.7
DDX55-209ENST00000542286 RRP7AQ9Y3A4 280 aaKnown RBP19.45■□□□□ 0.7
DDX55-209ENST00000542286 IFT172Q9UG01 1749 aa19.45■□□□□ 0.7
DDX55-209ENST00000542286 HECW2Q9P2P5 1572 aa19.45■□□□□ 0.7
DDX55-209ENST00000542286 IDI1Q13907 227 aa19.44■□□□□ 0.7
DDX55-209ENST00000542286 NPM2Q86SE8 214 aaKnown RBP19.44■□□□□ 0.7
DDX55-209ENST00000542286 MLH3Q9UHC1 1453 aa19.44■□□□□ 0.7
DDX55-209ENST00000542286 SIGLEC1Q9BZZ2 1709 aa19.44■□□□□ 0.7
DDX55-209ENST00000542286 FBXO31Q5XUX0 539 aaPredicted RBP19.43■□□□□ 0.7
DDX55-209ENST00000542286 CABP2Q9NPB3 220 aa19.43■□□□□ 0.7
DDX55-209ENST00000542286 ABCC3O15438 1527 aa19.43■□□□□ 0.7
DDX55-209ENST00000542286 NSD3Q9BZ95 1437 aa19.43■□□□□ 0.7
DDX55-209ENST00000542286 GOLGA2Q08379 1002 aa19.43■□□□□ 0.7
DDX55-209ENST00000542286 PIK3C2GO75747 1445 aa19.42■□□□□ 0.7
DDX55-209ENST00000542286 KIAA1210Q9ULL0 1709 aa19.42■□□□□ 0.7
DDX55-209ENST00000542286 LMTK2Q8IWU2 1503 aa19.41■□□□□ 0.7
DDX55-209ENST00000542286 NRXN1Q9ULB1 1477 aa19.41■□□□□ 0.7
DDX55-209ENST00000542286 ZNF521Q96K83 1311 aa19.41■□□□□ 0.7
DDX55-209ENST00000542286 MORC1Q86VD1 984 aa19.4■□□□□ 0.7
DDX55-209ENST00000542286 BCAR3O75815 825 aa19.39■□□□□ 0.7
DDX55-209ENST00000542286 SLFN5Q08AF3 891 aa19.38■□□□□ 0.69
DDX55-209ENST00000542286 RTL5Q5HYW3 569 aaPredicted RBP19.38■□□□□ 0.69
DDX55-209ENST00000542286 PPLO60437 1756 aa19.37■□□□□ 0.69
DDX55-209ENST00000542286 ADGRB1O14514 1584 aa19.37■□□□□ 0.69
DDX55-209ENST00000542286 MLECQ14165 292 aa19.36■□□□□ 0.69
DDX55-209ENST00000542286 IPO9Q96P70 1041 aaKnown RBP19.36■□□□□ 0.69
DDX55-209ENST00000542286 DIP2CQ9Y2E4 1556 aa19.35■□□□□ 0.69
DDX55-209ENST00000542286 ANP32AP39687 249 aaKnown RBP19.35■□□□□ 0.69
DDX55-209ENST00000542286 FAM69CQ0P6D2 419 aa19.35■□□□□ 0.69
DDX55-209ENST00000542286 CAMSAP1Q5T5Y3 1602 aa19.34■□□□□ 0.69
DDX55-209ENST00000542286 QRICH2Q9H0J4 1663 aa19.34■□□□□ 0.69
DDX55-209ENST00000542286 MTHFSP49914 203 aa19.33■□□□□ 0.69
DDX55-209ENST00000542286 MINK1Q8N4C8 1332 aaPredicted RBP19.33■□□□□ 0.69
DDX55-209ENST00000542286 NPC1L1Q9UHC9 1359 aa19.33■□□□□ 0.69
DDX55-209ENST00000542286 NEURL4Q96JN8 1562 aa19.33■□□□□ 0.69
DDX55-209ENST00000542286 ZBTB47Q9UFB7 747 aaPredicted RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms