RNA–Protein interactions for RNA: ENST00000542139.1

RAD9A-207, Transcript of RAD9 checkpoint clamp component A, humanhuman

TSL 4

Gene RAD9A, Length 578 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9A-207ENST00000542139 SLC52A1Q9NWF4 448 aa23.94■■□□□ 1.42
RAD9A-207ENST00000542139 COL16A1Q07092 1604 aaPredicted RBP23.94■■□□□ 1.42
RAD9A-207ENST00000542139 LRP6O75581 1613 aa23.93■■□□□ 1.42
RAD9A-207ENST00000542139 RXRBP28702 533 aa23.93■■□□□ 1.42
RAD9A-207ENST00000542139 HDGFP51858 240 aaKnown RBP23.93■■□□□ 1.42
RAD9A-207ENST00000542139 KANK4Q5T7N3 995 aaPredicted RBP23.92■■□□□ 1.42
RAD9A-207ENST00000542139 LMTK2Q8IWU2 1503 aa23.91■■□□□ 1.42
RAD9A-207ENST00000542139 ABCC5O15440 1437 aa23.91■■□□□ 1.42
RAD9A-207ENST00000542139 VPS8Q8N3P4 1428 aa23.91■■□□□ 1.42
RAD9A-207ENST00000542139 CROCC2H7BZ55 1655 aa23.9■■□□□ 1.42
RAD9A-207ENST00000542139 ATF3P18847 181 aa23.89■■□□□ 1.41
RAD9A-207ENST00000542139 NOS1P29475 1434 aa23.89■■□□□ 1.41
RAD9A-207ENST00000542139 CADPS2Q86UW7 1296 aa23.88■■□□□ 1.41
RAD9A-207ENST00000542139 PLEKHG1Q9ULL1 1385 aa23.88■■□□□ 1.41
RAD9A-207ENST00000542139 CHD2O14647 1828 aaKnown RBP23.87■■□□□ 1.41
RAD9A-207ENST00000542139 NCOA3Q9Y6Q9 1424 aa23.86■■□□□ 1.41
RAD9A-207ENST00000542139 NUTM2BA6NNL0 878 aaPredicted RBP23.86■■□□□ 1.41
RAD9A-207ENST00000542139 NUTM2EB1AL46 878 aaPredicted RBP23.86■■□□□ 1.41
RAD9A-207ENST00000542139 NUTM2AQ8IVF1 878 aaPredicted RBP23.86■■□□□ 1.41
RAD9A-207ENST00000542139 ANKRD30AQ9BXX3 1397 aa23.86■■□□□ 1.41
RAD9A-207ENST00000542139 DAPK1P53355 1430 aa23.85■■□□□ 1.41
RAD9A-207ENST00000542139 CHIC2Q9UKJ5 165 aa23.85■■□□□ 1.41
RAD9A-207ENST00000542139 RIMS2Q9UQ26 1411 aa23.84■■□□□ 1.41
RAD9A-207ENST00000542139 SHPRHQ149N8 1683 aa23.83■■□□□ 1.41
RAD9A-207ENST00000542139 C19orf44Q9H6X5 657 aa23.83■■□□□ 1.41
RAD9A-207ENST00000542139 TBX22Q9Y458 520 aa23.83■■□□□ 1.41
RAD9A-207ENST00000542139 AHDC1Q5TGY3 1603 aaPredicted RBP23.83■■□□□ 1.41
RAD9A-207ENST00000542139 PTPN23Q9H3S7 1636 aa23.83■■□□□ 1.41
RAD9A-207ENST00000542139 CDK12Q9NYV4 1490 aaPredicted RBP23.81■■□□□ 1.4
RAD9A-207ENST00000542139 ZFYVE9O95405 1425 aa23.81■■□□□ 1.4
RAD9A-207ENST00000542139 CHGAP10645 457 aaKnown RBP23.8■■□□□ 1.4
RAD9A-207ENST00000542139 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.8■■□□□ 1.4
RAD9A-207ENST00000542139 AFF2P51816 1311 aa23.79■■□□□ 1.4
RAD9A-207ENST00000542139 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.78■■□□□ 1.4
RAD9A-207ENST00000542139 RPRD2Q5VT52 1461 aaKnown RBP23.77■■□□□ 1.4
RAD9A-207ENST00000542139 APLP2Q06481 763 aa23.76■■□□□ 1.39
RAD9A-207ENST00000542139 MYO5BQ9ULV0 1848 aa23.75■■□□□ 1.39
RAD9A-207ENST00000542139 BRINP3Q76B58 766 aa23.75■■□□□ 1.39
RAD9A-207ENST00000542139 GCC2Q8IWJ2 1684 aa23.75■■□□□ 1.39
RAD9A-207ENST00000542139 NUTM2DQ5VT03 806 aaPredicted RBP23.73■■□□□ 1.39
RAD9A-207ENST00000542139 PIK3R4Q99570 1358 aa23.72■■□□□ 1.39
RAD9A-207ENST00000542139 DIP2AQ14689 1571 aa23.71■■□□□ 1.39
RAD9A-207ENST00000542139 C8orf37Q96NL8 207 aa23.71■■□□□ 1.39
RAD9A-207ENST00000542139 TMEM131LA2VDJ0 1609 aa23.7■■□□□ 1.39
RAD9A-207ENST00000542139 RBM6P78332 1123 aaKnown RBP23.7■■□□□ 1.38
RAD9A-207ENST00000542139 QTRT2Q9H974 415 aaKnown RBP23.7■■□□□ 1.38
RAD9A-207ENST00000542139 AMOTL2Q9Y2J4 779 aa23.69■■□□□ 1.38
RAD9A-207ENST00000542139 ADAMTS13Q76LX8 1427 aa23.68■■□□□ 1.38
RAD9A-207ENST00000542139 FOXD1Q16676 465 aa23.68■■□□□ 1.38
RAD9A-207ENST00000542139 LRRC59Q96AG4 307 aaKnown RBP23.68■■□□□ 1.38
RAD9A-207ENST00000542139 RGS12O14924 1447 aa23.67■■□□□ 1.38
RAD9A-207ENST00000542139 TRPM2O94759 1503 aa23.66■■□□□ 1.38
RAD9A-207ENST00000542139 SRCAPQ6ZRS2 3230 aa23.66■■□□□ 1.38
RAD9A-207ENST00000542139 SETD5Q9C0A6 1442 aa23.66■■□□□ 1.38
RAD9A-207ENST00000542139 ASXL1Q8IXJ9 1541 aa23.65■■□□□ 1.38
RAD9A-207ENST00000542139 DCCP43146 1447 aa23.65■■□□□ 1.38
RAD9A-207ENST00000542139 NGLY1Q96IV0 654 aa23.64■■□□□ 1.37
RAD9A-207ENST00000542139 ANKRD50Q9ULJ7 1429 aa23.64■■□□□ 1.37
RAD9A-207ENST00000542139 ADGRL2O95490 1459 aa23.62■■□□□ 1.37
RAD9A-207ENST00000542139 ATAD2Q6PL18 1390 aa23.61■■□□□ 1.37
RAD9A-207ENST00000542139 LOC105371045A0A1W2PR82 267 aa23.59■■□□□ 1.37
RAD9A-207ENST00000542139 FAM50AQ14320 339 aaKnown RBP23.59■■□□□ 1.37
RAD9A-207ENST00000542139 ZRANB1Q9UGI0 708 aa23.59■■□□□ 1.37
RAD9A-207ENST00000542139 MST1RQ04912 1400 aa23.59■■□□□ 1.37
RAD9A-207ENST00000542139 PTPRUQ92729 1446 aa23.59■■□□□ 1.37
RAD9A-207ENST00000542139 ADAMTS2O95450 1211 aa23.58■■□□□ 1.37
RAD9A-207ENST00000542139 NHSL1Q5SYE7 1610 aa23.58■■□□□ 1.36
RAD9A-207ENST00000542139 PNPLA6Q8IY17 1366 aa23.57■■□□□ 1.36
RAD9A-207ENST00000542139 DDX17Q92841 729 aaKnown RBP23.55■■□□□ 1.36
RAD9A-207ENST00000542139 UNC13BO14795 1591 aa23.52■■□□□ 1.36
RAD9A-207ENST00000542139 USP21Q9UK80 565 aa23.52■■□□□ 1.36
RAD9A-207ENST00000542139 TRPC5Q9UL62 973 aaPredicted RBP23.51■■□□□ 1.35
RAD9A-207ENST00000542139 E9PCH4 1651 aa23.5■■□□□ 1.35
RAD9A-207ENST00000542139 XRN1Q8IZH2 1706 aaKnown RBP23.49■■□□□ 1.35
RAD9A-207ENST00000542139 ZNF326Q5BKZ1 582 aaKnown RBP23.48■■□□□ 1.35
RAD9A-207ENST00000542139 ADGRL3Q9HAR2 1447 aa23.48■■□□□ 1.35
RAD9A-207ENST00000542139 SETBP1Q9Y6X0 1596 aa23.44■■□□□ 1.34
RAD9A-207ENST00000542139 METP08581 1390 aa23.43■■□□□ 1.34
RAD9A-207ENST00000542139 CCDC125Q86Z20 511 aa23.43■■□□□ 1.34
RAD9A-207ENST00000542139 NRXN3Q9Y4C0 1643 aa23.42■■□□□ 1.34
RAD9A-207ENST00000542139 PTCH1Q13635 1447 aa23.41■■□□□ 1.34
RAD9A-207ENST00000542139 IQGAP3Q86VI3 1631 aa23.41■■□□□ 1.34
RAD9A-207ENST00000542139 NUP155O75694 1391 aa23.4■■□□□ 1.34
RAD9A-207ENST00000542139 FNBP4Q8N3X1 1017 aaPredicted RBP23.4■■□□□ 1.34
RAD9A-207ENST00000542139 C1orf167Q5SNV9 1468 aa23.4■■□□□ 1.34
RAD9A-207ENST00000542139 NALCNQ8IZF0 1738 aa23.39■■□□□ 1.33
RAD9A-207ENST00000542139 SOS2Q07890 1332 aaPredicted RBP23.37■■□□□ 1.33
RAD9A-207ENST00000542139 ATRNO75882 1429 aa23.37■■□□□ 1.33
RAD9A-207ENST00000542139 ORAI2Q96SN7 254 aa23.35■■□□□ 1.33
RAD9A-207ENST00000542139 EP400Q96L91 3159 aa23.34■■□□□ 1.33
RAD9A-207ENST00000542139 LAMC1P11047 1609 aa23.32■■□□□ 1.32
RAD9A-207ENST00000542139 ROCK1Q13464 1354 aa23.31■■□□□ 1.32
RAD9A-207ENST00000542139 SPHKAPQ2M3C7 1700 aa23.29■■□□□ 1.32
RAD9A-207ENST00000542139 GJD4Q96KN9 370 aaPredicted RBP23.28■■□□□ 1.32
RAD9A-207ENST00000542139 SF3B2Q13435 895 aaKnown RBP23.27■■□□□ 1.32
RAD9A-207ENST00000542139 NPHP3Q7Z494 1330 aa23.27■■□□□ 1.32
RAD9A-207ENST00000542139 COL22A1Q8NFW1 1626 aaPredicted RBP23.26■■□□□ 1.31
RAD9A-207ENST00000542139 BCL9LQ86UU0 1499 aa23.25■■□□□ 1.31
RAD9A-207ENST00000542139 ITGAEP38570 1179 aa23.25■■□□□ 1.31
RAD9A-207ENST00000542139 BLMP54132 1417 aaPredicted RBP23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms