RNA–Protein interactions for RNA: ENST00000541640.5

PRKAB1-206, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,303 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-206ENST00000541640 BLMP54132 1417 aaPredicted RBP17.78■□□□□ 0.44
PRKAB1-206ENST00000541640 ZNF518AQ6AHZ1 1483 aa17.78■□□□□ 0.44
PRKAB1-206ENST00000541640 MAP3K4Q9Y6R4 1608 aa17.78■□□□□ 0.44
PRKAB1-206ENST00000541640 FAM69CQ0P6D2 419 aa17.78■□□□□ 0.44
PRKAB1-206ENST00000541640 PDE3BQ13370 1112 aa17.78■□□□□ 0.44
PRKAB1-206ENST00000541640 IFT172Q9UG01 1749 aa17.78■□□□□ 0.44
PRKAB1-206ENST00000541640 CFAP74Q9C0B2 1584 aa17.78■□□□□ 0.44
PRKAB1-206ENST00000541640 CDCA8Q53HL2 280 aa17.77■□□□□ 0.44
PRKAB1-206ENST00000541640 ANP32EQ9BTT0 268 aa17.77■□□□□ 0.44
PRKAB1-206ENST00000541640 DIP2BQ9P265 1576 aa17.77■□□□□ 0.43
PRKAB1-206ENST00000541640 SENP3-EIF4A1A0A087X0R7 540 aa17.76■□□□□ 0.43
PRKAB1-206ENST00000541640 DNAJC5Q9H3Z4 198 aa17.76■□□□□ 0.43
PRKAB1-206ENST00000541640 MYT1LQ9UL68 1186 aa17.76■□□□□ 0.43
PRKAB1-206ENST00000541640 GLI2P10070 1586 aa17.76■□□□□ 0.43
PRKAB1-206ENST00000541640 PPRC1Q5VV67 1664 aaKnown RBP17.76■□□□□ 0.43
PRKAB1-206ENST00000541640 EIF3AQ14152 1382 aaKnown RBP17.76■□□□□ 0.43
PRKAB1-206ENST00000541640 FANCIQ9NVI1 1328 aa17.76■□□□□ 0.43
PRKAB1-206ENST00000541640 MYOM1P52179 1685 aa17.75■□□□□ 0.43
PRKAB1-206ENST00000541640 ABCA6Q8N139 1617 aa17.74■□□□□ 0.43
PRKAB1-206ENST00000541640 UGGT1Q9NYU2 1555 aa17.74■□□□□ 0.43
PRKAB1-206ENST00000541640 MROH2AA6NES4 1674 aa17.73■□□□□ 0.43
PRKAB1-206ENST00000541640 KDM5AP29375 1690 aaKnown RBP17.73■□□□□ 0.43
PRKAB1-206ENST00000541640 NRXN1Q9ULB1 1477 aa17.71■□□□□ 0.43
PRKAB1-206ENST00000541640 KNSTRNQ9Y448 316 aa17.71■□□□□ 0.43
PRKAB1-206ENST00000541640 POGZQ7Z3K3 1410 aa17.7■□□□□ 0.42
PRKAB1-206ENST00000541640 ASXL1Q8IXJ9 1541 aa17.7■□□□□ 0.42
PRKAB1-206ENST00000541640 SLC24A1O60721 1099 aa17.7■□□□□ 0.42
PRKAB1-206ENST00000541640 NPC1L1Q9UHC9 1359 aa17.7■□□□□ 0.42
PRKAB1-206ENST00000541640 MLH3Q9UHC1 1453 aa17.7■□□□□ 0.42
PRKAB1-206ENST00000541640 RRP1P56182 461 aaKnown RBP17.69■□□□□ 0.42
PRKAB1-206ENST00000541640 AMER1Q5JTC6 1135 aaPredicted RBP17.69■□□□□ 0.42
PRKAB1-206ENST00000541640 CCDC136Q96JN2 1154 aa17.69■□□□□ 0.42
PRKAB1-206ENST00000541640 MYO3AQ8NEV4 1616 aa17.69■□□□□ 0.42
PRKAB1-206ENST00000541640 ADGRB3O60242 1522 aa17.69■□□□□ 0.42
PRKAB1-206ENST00000541640 HECW2Q9P2P5 1572 aa17.69■□□□□ 0.42
PRKAB1-206ENST00000541640 RCAN3Q9UKA8 241 aa17.69■□□□□ 0.42
PRKAB1-206ENST00000541640 FRMPD1Q5SYB0 1578 aa17.68■□□□□ 0.42
PRKAB1-206ENST00000541640 TSPOAP1O95153 1857 aa17.68■□□□□ 0.42
PRKAB1-206ENST00000541640 NEO1Q92859 1461 aa17.67■□□□□ 0.42
PRKAB1-206ENST00000541640 PPP2R1AP30153 589 aa17.67■□□□□ 0.42
PRKAB1-206ENST00000541640 ADGRF5Q8IZF2 1346 aa17.67■□□□□ 0.42
PRKAB1-206ENST00000541640 KIF13AQ9H1H9 1805 aa17.67■□□□□ 0.42
PRKAB1-206ENST00000541640 CFAP70Q5T0N1 1121 aa17.66■□□□□ 0.42
PRKAB1-206ENST00000541640 ERVK-7P63135 1459 aa17.66■□□□□ 0.42
PRKAB1-206ENST00000541640 SETBP1Q9Y6X0 1596 aa17.66■□□□□ 0.42
PRKAB1-206ENST00000541640 PIK3C2GO75747 1445 aa17.65■□□□□ 0.42
PRKAB1-206ENST00000541640 SALL2Q9Y467 1007 aaPredicted RBP17.65■□□□□ 0.42
PRKAB1-206ENST00000541640 PPLO60437 1756 aa17.64■□□□□ 0.41
PRKAB1-206ENST00000541640 MSH5O43196 834 aa17.64■□□□□ 0.41
PRKAB1-206ENST00000541640 SBNO2Q9Y2G9 1366 aa17.63■□□□□ 0.41
PRKAB1-206ENST00000541640 CDCA7LQ96GN5 454 aa17.63■□□□□ 0.41
PRKAB1-206ENST00000541640 NPATQ14207 1427 aa17.62■□□□□ 0.41
PRKAB1-206ENST00000541640 ADAMTS8Q9UP79 889 aa17.62■□□□□ 0.41
PRKAB1-206ENST00000541640 NOS1P29475 1434 aa17.61■□□□□ 0.41
PRKAB1-206ENST00000541640 ABCC3O15438 1527 aa17.6■□□□□ 0.41
PRKAB1-206ENST00000541640 RAPGEF3O95398 923 aa17.59■□□□□ 0.41
PRKAB1-206ENST00000541640 WDR43Q15061 677 aaKnown RBP eCLIP17.59■□□□□ 0.41
PRKAB1-206ENST00000541640 ZC3H13Q5T200 1668 aaKnown RBP17.59■□□□□ 0.41
PRKAB1-206ENST00000541640 EXOC6Q8TAG9 804 aa17.58■□□□□ 0.41
PRKAB1-206ENST00000541640 CAMSAP1Q5T5Y3 1602 aa17.58■□□□□ 0.4
PRKAB1-206ENST00000541640 RPGRIP1LQ68CZ1 1315 aa17.56■□□□□ 0.4
PRKAB1-206ENST00000541640 CFAP65Q6ZU64 1925 aaKnown RBP17.56■□□□□ 0.4
PRKAB1-206ENST00000541640 ADGRB1O14514 1584 aa17.56■□□□□ 0.4
PRKAB1-206ENST00000541640 PIK3C2BO00750 1634 aa17.55■□□□□ 0.4
PRKAB1-206ENST00000541640 TRHP20396 242 aaPredicted RBP17.55■□□□□ 0.4
PRKAB1-206ENST00000541640 GGT6Q6P531 493 aa17.55■□□□□ 0.4
PRKAB1-206ENST00000541640 ZNF521Q96K83 1311 aa17.55■□□□□ 0.4
PRKAB1-206ENST00000541640 QRICH2Q9H0J4 1663 aa17.54■□□□□ 0.4
PRKAB1-206ENST00000541640 PLEKHH1Q9ULM0 1364 aa17.54■□□□□ 0.4
PRKAB1-206ENST00000541640 C14orf93Q9H972 538 aaKnown RBP17.54■□□□□ 0.4
PRKAB1-206ENST00000541640 SIGLEC1Q9BZZ2 1709 aa17.54■□□□□ 0.4
PRKAB1-206ENST00000541640 CENPJQ9HC77 1338 aaPredicted RBP17.54■□□□□ 0.4
PRKAB1-206ENST00000541640 DIP2CQ9Y2E4 1556 aa17.54■□□□□ 0.4
PRKAB1-206ENST00000541640 RICTORQ6R327 1708 aa17.54■□□□□ 0.4
PRKAB1-206ENST00000541640 CARD14Q9BXL6 1004 aa17.53■□□□□ 0.4
PRKAB1-206ENST00000541640 CHGAP10645 457 aaKnown RBP17.52■□□□□ 0.4
PRKAB1-206ENST00000541640 ARHGAP31Q2M1Z3 1444 aa17.5■□□□□ 0.39
PRKAB1-206ENST00000541640 DUSP27Q5VZP5 1158 aa17.49■□□□□ 0.39
PRKAB1-206ENST00000541640 GOLGA2Q08379 1002 aa17.48■□□□□ 0.39
PRKAB1-206ENST00000541640 USP32Q8NFA0 1604 aa17.48■□□□□ 0.39
PRKAB1-206ENST00000541640 NEXMIFQ5QGS0 1516 aa17.48■□□□□ 0.39
PRKAB1-206ENST00000541640 PLIN1O60240 522 aa17.47■□□□□ 0.39
PRKAB1-206ENST00000541640 TRAK1Q9UPV9 953 aa17.47■□□□□ 0.39
PRKAB1-206ENST00000541640 ARHGEF28Q8N1W1 1705 aaKnown RBP17.46■□□□□ 0.39
PRKAB1-206ENST00000541640 POLR3AO14802 1390 aaPredicted RBP17.46■□□□□ 0.39
PRKAB1-206ENST00000541640 ERICH6Q7L0X2 663 aa17.46■□□□□ 0.38
PRKAB1-206ENST00000541640 TCERG1O14776 1098 aaKnown RBP17.45■□□□□ 0.38
PRKAB1-206ENST00000541640 SLFN5Q08AF3 891 aa17.44■□□□□ 0.38
PRKAB1-206ENST00000541640 TRMT2AQ8IZ69 625 aaKnown RBP17.44■□□□□ 0.38
PRKAB1-206ENST00000541640 NGEFQ8N5V2 710 aa17.44■□□□□ 0.38
PRKAB1-206ENST00000541640 CRBNQ96SW2 442 aa17.44■□□□□ 0.38
PRKAB1-206ENST00000541640 NSD3Q9BZ95 1437 aa17.44■□□□□ 0.38
PRKAB1-206ENST00000541640 PUS7Q96PZ0 661 aaKnown RBP17.44■□□□□ 0.38
PRKAB1-206ENST00000541640 YEATS2Q9ULM3 1422 aa17.43■□□□□ 0.38
PRKAB1-206ENST00000541640 VGFO15240 615 aaPredicted RBP17.43■□□□□ 0.38
PRKAB1-206ENST00000541640 TMEM132EQ6IEE7 984 aa17.42■□□□□ 0.38
PRKAB1-206ENST00000541640 SHPRHQ149N8 1683 aa17.42■□□□□ 0.38
PRKAB1-206ENST00000541640 ZFYVE9O95405 1425 aa17.42■□□□□ 0.38
PRKAB1-206ENST00000541640 CCDC146Q8IYE0 955 aa17.42■□□□□ 0.38
PRKAB1-206ENST00000541640 BCL11AQ9H165 835 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 778 ms