RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 ARID4BQ4LE39 1312 aaPredicted RBP21.15■□□□□ 0.98
CLPTM1-202ENST00000541297 GPRASP1Q5JY77 1395 aa21.15■□□□□ 0.98
CLPTM1-202ENST00000541297 ADGRF5Q8IZF2 1346 aa21.13■□□□□ 0.97
CLPTM1-202ENST00000541297 BCANQ96GW7 911 aa21.13■□□□□ 0.97
CLPTM1-202ENST00000541297 ANP32EQ9BTT0 268 aa21.13■□□□□ 0.97
CLPTM1-202ENST00000541297 LAMC1P11047 1609 aa21.12■□□□□ 0.97
CLPTM1-202ENST00000541297 IDI1Q13907 227 aa21.12■□□□□ 0.97
CLPTM1-202ENST00000541297 MYO5BQ9ULV0 1848 aa21.11■□□□□ 0.97
CLPTM1-202ENST00000541297 PPLO60437 1756 aa21.11■□□□□ 0.97
CLPTM1-202ENST00000541297 STAC3Q96MF2 364 aa21.11■□□□□ 0.97
CLPTM1-202ENST00000541297 MYOM2P54296 1465 aa21.1■□□□□ 0.97
CLPTM1-202ENST00000541297 ANP32CO43423 234 aa21.1■□□□□ 0.97
CLPTM1-202ENST00000541297 PPP6R1Q9UPN7 881 aa21.09■□□□□ 0.97
CLPTM1-202ENST00000541297 NUTM2DQ5VT03 806 aaPredicted RBP21.09■□□□□ 0.97
CLPTM1-202ENST00000541297 ESF1Q9H501 851 aaKnown RBP21.08■□□□□ 0.96
CLPTM1-202ENST00000541297 ERVK-7P63135 1459 aa21.08■□□□□ 0.96
CLPTM1-202ENST00000541297 CFAP70Q5T0N1 1121 aa21.07■□□□□ 0.96
CLPTM1-202ENST00000541297 FKBP8Q14318 412 aa21.07■□□□□ 0.96
CLPTM1-202ENST00000541297 SLC52A1Q9NWF4 448 aa21.06■□□□□ 0.96
CLPTM1-202ENST00000541297 KIAA1210Q9ULL0 1709 aa21.05■□□□□ 0.96
CLPTM1-202ENST00000541297 IQGAP1P46940 1657 aa21.05■□□□□ 0.96
CLPTM1-202ENST00000541297 BCL11AQ9H165 835 aa21.04■□□□□ 0.96
CLPTM1-202ENST00000541297 SENP3Q9H4L4 574 aaPredicted RBP21.03■□□□□ 0.96
CLPTM1-202ENST00000541297 NRXN1Q9ULB1 1477 aa21.03■□□□□ 0.96
CLPTM1-202ENST00000541297 TMEM131LA2VDJ0 1609 aa21.02■□□□□ 0.96
CLPTM1-202ENST00000541297 NEXMIFQ5QGS0 1516 aa21.01■□□□□ 0.95
CLPTM1-202ENST00000541297 RPGRIP1LQ68CZ1 1315 aa21.01■□□□□ 0.95
CLPTM1-202ENST00000541297 ZMYM3Q14202 1370 aa21.01■□□□□ 0.95
CLPTM1-202ENST00000541297 TESK2Q96S53 571 aa21■□□□□ 0.95
CLPTM1-202ENST00000541297 SCAF11Q99590 1463 aaKnown RBP20.99■□□□□ 0.95
CLPTM1-202ENST00000541297 SPATA31D1Q6ZQQ2 1576 aa20.99■□□□□ 0.95
CLPTM1-202ENST00000541297 PIK3C2GO75747 1445 aa20.99■□□□□ 0.95
CLPTM1-202ENST00000541297 STAG3Q9UJ98 1225 aa20.99■□□□□ 0.95
CLPTM1-202ENST00000541297 DISP3Q9P2K9 1392 aa20.98■□□□□ 0.95
CLPTM1-202ENST00000541297 CNGB1Q14028 1251 aaPredicted RBP20.97■□□□□ 0.95
CLPTM1-202ENST00000541297 VGFO15240 615 aaPredicted RBP20.96■□□□□ 0.95
CLPTM1-202ENST00000541297 TMEM132EQ6IEE7 984 aa20.94■□□□□ 0.94
CLPTM1-202ENST00000541297 C14orf93Q9H972 538 aaKnown RBP20.93■□□□□ 0.94
CLPTM1-202ENST00000541297 TMF1P82094 1093 aa20.93■□□□□ 0.94
CLPTM1-202ENST00000541297 PLPPR3Q6T4P5 718 aa20.92■□□□□ 0.94
CLPTM1-202ENST00000541297 EIF3AQ14152 1382 aaKnown RBP20.92■□□□□ 0.94
CLPTM1-202ENST00000541297 CCER2I3L3R5 266 aa20.91■□□□□ 0.94
CLPTM1-202ENST00000541297 SETBP1Q9Y6X0 1596 aa20.91■□□□□ 0.94
CLPTM1-202ENST00000541297 CEBPAP49715 358 aaPredicted RBP20.9■□□□□ 0.94
CLPTM1-202ENST00000541297 TRAK1Q9UPV9 953 aa20.9■□□□□ 0.94
CLPTM1-202ENST00000541297 FER1L4A9Z1Z3 1794 aa20.89■□□□□ 0.94
CLPTM1-202ENST00000541297 NEFLP07196 543 aa20.89■□□□□ 0.93
CLPTM1-202ENST00000541297 PRKRIP1Q9H875 184 aaPredicted RBP20.89■□□□□ 0.93
CLPTM1-202ENST00000541297 A2ML1A8K2U0 1454 aa20.89■□□□□ 0.93
CLPTM1-202ENST00000541297 ADGRB1O14514 1584 aa20.89■□□□□ 0.93
CLPTM1-202ENST00000541297 TNRQ92752 1358 aa20.86■□□□□ 0.93
CLPTM1-202ENST00000541297 RBM19Q9Y4C8 960 aaKnown RBP20.86■□□□□ 0.93
CLPTM1-202ENST00000541297 ZFYVE9O95405 1425 aa20.86■□□□□ 0.93
CLPTM1-202ENST00000541297 C3P01024 1663 aa20.85■□□□□ 0.93
CLPTM1-202ENST00000541297 RIMS2Q9UQ26 1411 aa20.82■□□□□ 0.92
CLPTM1-202ENST00000541297 MYO3AQ8NEV4 1616 aa20.82■□□□□ 0.92
CLPTM1-202ENST00000541297 CCDC184Q52MB2 194 aa20.82■□□□□ 0.92
CLPTM1-202ENST00000541297 QRICH2Q9H0J4 1663 aa20.81■□□□□ 0.92
CLPTM1-202ENST00000541297 CENPJQ9HC77 1338 aaPredicted RBP20.81■□□□□ 0.92
CLPTM1-202ENST00000541297 STK26Q9P289 416 aa20.8■□□□□ 0.92
CLPTM1-202ENST00000541297 ASXL1Q8IXJ9 1541 aa20.8■□□□□ 0.92
CLPTM1-202ENST00000541297 UBR1Q8IWV7 1749 aa20.79■□□□□ 0.92
CLPTM1-202ENST00000541297 ARHGEF28Q8N1W1 1705 aaKnown RBP20.79■□□□□ 0.92
CLPTM1-202ENST00000541297 KDM5AP29375 1690 aaKnown RBP20.79■□□□□ 0.92
CLPTM1-202ENST00000541297 PANK3Q9H999 370 aa20.79■□□□□ 0.92
CLPTM1-202ENST00000541297 ALKQ9UM73 1620 aa20.78■□□□□ 0.92
CLPTM1-202ENST00000541297 CDCA8Q53HL2 280 aa20.77■□□□□ 0.92
CLPTM1-202ENST00000541297 MYOM1P52179 1685 aa20.76■□□□□ 0.91
CLPTM1-202ENST00000541297 SAFB2Q14151 953 aaKnown RBP eCLIP20.76■□□□□ 0.91
CLPTM1-202ENST00000541297 PER1O15534 1290 aaPredicted RBP20.74■□□□□ 0.91
CLPTM1-202ENST00000541297 MRS2Q9HD23 443 aa20.74■□□□□ 0.91
CLPTM1-202ENST00000541297 RIMS1Q86UR5 1692 aaKnown RBP20.73■□□□□ 0.91
CLPTM1-202ENST00000541297 SBNO2Q9Y2G9 1366 aa20.72■□□□□ 0.91
CLPTM1-202ENST00000541297 YTHDC2Q9H6S0 1430 aaKnown RBP20.71■□□□□ 0.91
CLPTM1-202ENST00000541297 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.71■□□□□ 0.91
CLPTM1-202ENST00000541297 PTPRMP28827 1452 aa20.71■□□□□ 0.91
CLPTM1-202ENST00000541297 NLRP1Q9C000 1473 aa20.71■□□□□ 0.91
CLPTM1-202ENST00000541297 NRXN3Q9Y4C0 1643 aa20.71■□□□□ 0.91
CLPTM1-202ENST00000541297 SETD1AO15047 1707 aaKnown RBP20.7■□□□□ 0.91
CLPTM1-202ENST00000541297 SLC24A1O60721 1099 aa20.7■□□□□ 0.9
CLPTM1-202ENST00000541297 TMEM2Q9UHN6 1383 aa20.7■□□□□ 0.9
CLPTM1-202ENST00000541297 CC2D1BQ5T0F9 858 aaKnown RBP20.7■□□□□ 0.9
CLPTM1-202ENST00000541297 FAM9BQ8IZU0 186 aa20.68■□□□□ 0.9
CLPTM1-202ENST00000541297 PRAM1Q96QH2 718 aa20.67■□□□□ 0.9
CLPTM1-202ENST00000541297 KTN1Q86UP2 1357 aaKnown RBP20.67■□□□□ 0.9
CLPTM1-202ENST00000541297 HDGFP51858 240 aaKnown RBP20.67■□□□□ 0.9
CLPTM1-202ENST00000541297 LTKP29376 864 aa20.65■□□□□ 0.9
CLPTM1-202ENST00000541297 POGKQ9P215 609 aa20.65■□□□□ 0.9
CLPTM1-202ENST00000541297 RALBP1Q15311 655 aa20.64■□□□□ 0.9
CLPTM1-202ENST00000541297 KNSTRNQ9Y448 316 aa20.64■□□□□ 0.9
CLPTM1-202ENST00000541297 TULP4Q9NRJ4 1543 aa20.64■□□□□ 0.9
CLPTM1-202ENST00000541297 TMC1Q8TDI8 760 aa20.64■□□□□ 0.89
CLPTM1-202ENST00000541297 METP08581 1390 aa20.63■□□□□ 0.89
CLPTM1-202ENST00000541297 MINK1Q8N4C8 1332 aaPredicted RBP20.63■□□□□ 0.89
CLPTM1-202ENST00000541297 MSH5O43196 834 aa20.63■□□□□ 0.89
CLPTM1-202ENST00000541297 ADAMTSL3P82987 1691 aa20.63■□□□□ 0.89
CLPTM1-202ENST00000541297 EVC2Q86UK5 1308 aa20.63■□□□□ 0.89
CLPTM1-202ENST00000541297 TXNDC2Q86VQ3 553 aa20.62■□□□□ 0.89
CLPTM1-202ENST00000541297 PARD3Q8TEW0 1356 aa20.62■□□□□ 0.89
CLPTM1-202ENST00000541297 MYBBP1AQ9BQG0 1328 aaKnown RBP20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms