RNA–Protein interactions for RNA: ENST00000540301.1

KLHL42-203, Transcript of kelch like family member 42, humanhuman

TSL 3

Gene KLHL42, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42-203ENST00000540301 ARHGAP31Q2M1Z3 1444 aa13.27□□□□□ -0.29
KLHL42-203ENST00000540301 EFCAB6Q5THR3 1501 aa13.27□□□□□ -0.29
KLHL42-203ENST00000540301 MROH1Q8NDA8 1641 aa13.27□□□□□ -0.29
KLHL42-203ENST00000540301 CEP162Q5TB80 1403 aa13.26□□□□□ -0.29
KLHL42-203ENST00000540301 C14orf37Q86TY3 774 aa13.26□□□□□ -0.29
KLHL42-203ENST00000540301 EIF2AK4Q9P2K8 1649 aaKnown RBP13.26□□□□□ -0.29
KLHL42-203ENST00000540301 EHBP1L1Q8N3D4 1523 aa13.25□□□□□ -0.29
KLHL42-203ENST00000540301 CADPS2Q86UW7 1296 aa13.25□□□□□ -0.29
KLHL42-203ENST00000540301 C8orf37Q96NL8 207 aa13.25□□□□□ -0.29
KLHL42-203ENST00000540301 ARHGEF5Q12774 1597 aa13.24□□□□□ -0.29
KLHL42-203ENST00000540301 IDI1Q13907 227 aa13.24□□□□□ -0.29
KLHL42-203ENST00000540301 NGLY1Q96IV0 654 aa13.24□□□□□ -0.29
KLHL42-203ENST00000540301 NCOA3Q9Y6Q9 1424 aa13.23□□□□□ -0.29
KLHL42-203ENST00000540301 ATF3P18847 181 aa13.23□□□□□ -0.29
KLHL42-203ENST00000540301 DIP2AQ14689 1571 aa13.23□□□□□ -0.29
KLHL42-203ENST00000540301 C19orf44Q9H6X5 657 aa13.22□□□□□ -0.29
KLHL42-203ENST00000540301 CHD2O14647 1828 aaKnown RBP13.21□□□□□ -0.29
KLHL42-203ENST00000540301 BRINP3Q76B58 766 aa13.21□□□□□ -0.29
KLHL42-203ENST00000540301 MAST1Q9Y2H9 1570 aa13.2□□□□□ -0.3
KLHL42-203ENST00000540301 CCDC125Q86Z20 511 aa13.19□□□□□ -0.3
KLHL42-203ENST00000540301 SETD5Q9C0A6 1442 aa13.19□□□□□ -0.3
KLHL42-203ENST00000540301 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.19□□□□□ -0.3
KLHL42-203ENST00000540301 LRRC59Q96AG4 307 aaKnown RBP13.18□□□□□ -0.3
KLHL42-203ENST00000540301 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.18□□□□□ -0.3
KLHL42-203ENST00000540301 DUOX2Q9NRD8 1548 aa13.17□□□□□ -0.3
KLHL42-203ENST00000540301 TBX22Q9Y458 520 aa13.16□□□□□ -0.3
KLHL42-203ENST00000540301 PLEKHG1Q9ULL1 1385 aa13.16□□□□□ -0.3
KLHL42-203ENST00000540301 ADGRB3O60242 1522 aa13.15□□□□□ -0.3
KLHL42-203ENST00000540301 PPP1R15AO75807 674 aaPredicted RBP13.15□□□□□ -0.3
KLHL42-203ENST00000540301 ADAMTS2O95450 1211 aa13.15□□□□□ -0.3
KLHL42-203ENST00000540301 HDGFP51858 240 aaKnown RBP13.14□□□□□ -0.31
KLHL42-203ENST00000540301 USP21Q9UK80 565 aa13.14□□□□□ -0.31
KLHL42-203ENST00000540301 TRPC5Q9UL62 973 aaPredicted RBP13.14□□□□□ -0.31
KLHL42-203ENST00000540301 ASXL1Q8IXJ9 1541 aa13.13□□□□□ -0.31
KLHL42-203ENST00000540301 KANK1Q14678 1352 aa13.13□□□□□ -0.31
KLHL42-203ENST00000540301 PNPLA6Q8IY17 1366 aa13.13□□□□□ -0.31
KLHL42-203ENST00000540301 SLC52A1Q9NWF4 448 aa13.13□□□□□ -0.31
KLHL42-203ENST00000540301 MSH5O43196 834 aa13.12□□□□□ -0.31
KLHL42-203ENST00000540301 PIAS4Q8N2W9 510 aaPredicted RBP13.12□□□□□ -0.31
KLHL42-203ENST00000540301 ADRA2BP18089 450 aa13.11□□□□□ -0.31
KLHL42-203ENST00000540301 ZFYVE9O95405 1425 aa13.11□□□□□ -0.31
KLHL42-203ENST00000540301 NOS1P29475 1434 aa13.11□□□□□ -0.31
KLHL42-203ENST00000540301 ERBINQ96RT1 1412 aa13.11□□□□□ -0.31
KLHL42-203ENST00000540301 LRP5O75197 1615 aa13.1□□□□□ -0.31
KLHL42-203ENST00000540301 NHSL1Q5SYE7 1610 aa13.1□□□□□ -0.31
KLHL42-203ENST00000540301 KIF15Q9NS87 1388 aa13.1□□□□□ -0.31
KLHL42-203ENST00000540301 POTEDQ86YR6 584 aa13.1□□□□□ -0.31
KLHL42-203ENST00000540301 RIMS2Q9UQ26 1411 aa13.1□□□□□ -0.31
KLHL42-203ENST00000540301 DDX17Q92841 729 aaKnown RBP13.09□□□□□ -0.31
KLHL42-203ENST00000540301 RRP7BPQ9NSQ0 103 aa13.09□□□□□ -0.31
KLHL42-203ENST00000540301 PIK3R4Q99570 1358 aa13.08□□□□□ -0.31
KLHL42-203ENST00000540301 DCCP43146 1447 aa13.08□□□□□ -0.32
KLHL42-203ENST00000540301 FNBP4Q8N3X1 1017 aaPredicted RBP13.08□□□□□ -0.32
KLHL42-203ENST00000540301 LMTK2Q8IWU2 1503 aa13.08□□□□□ -0.32
KLHL42-203ENST00000540301 ATRNO75882 1429 aa13.07□□□□□ -0.32
KLHL42-203ENST00000540301 MST1RQ04912 1400 aa13.07□□□□□ -0.32
KLHL42-203ENST00000540301 ADAMTS13Q76LX8 1427 aa13.07□□□□□ -0.32
KLHL42-203ENST00000540301 AMOTL2Q9Y2J4 779 aa13.07□□□□□ -0.32
KLHL42-203ENST00000540301 DEFB132Q7Z7B7 95 aa13.06□□□□□ -0.32
KLHL42-203ENST00000540301 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.06□□□□□ -0.32
KLHL42-203ENST00000540301 BLMP54132 1417 aaPredicted RBP13.05□□□□□ -0.32
KLHL42-203ENST00000540301 MYO5BQ9ULV0 1848 aa13.05□□□□□ -0.32
KLHL42-203ENST00000540301 EP400Q96L91 3159 aa13.05□□□□□ -0.32
KLHL42-203ENST00000540301 MYOM3Q5VTT5 1437 aa13.05□□□□□ -0.32
KLHL42-203ENST00000540301 SF3B2Q13435 895 aaKnown RBP13.03□□□□□ -0.32
KLHL42-203ENST00000540301 PTCH1Q13635 1447 aa13.03□□□□□ -0.32
KLHL42-203ENST00000540301 PTPRUQ92729 1446 aa13.02□□□□□ -0.33
KLHL42-203ENST00000540301 GCC2Q8IWJ2 1684 aa13.02□□□□□ -0.33
KLHL42-203ENST00000540301 PSDA5PKW4 1024 aaPredicted RBP13.01□□□□□ -0.33
KLHL42-203ENST00000540301 CHGAP10645 457 aaKnown RBP13.01□□□□□ -0.33
KLHL42-203ENST00000540301 GJD4Q96KN9 370 aaPredicted RBP13.01□□□□□ -0.33
KLHL42-203ENST00000540301 TRPM2O94759 1503 aa13.01□□□□□ -0.33
KLHL42-203ENST00000540301 TMEM131LA2VDJ0 1609 aa13.01□□□□□ -0.33
KLHL42-203ENST00000540301 HRCP23327 699 aa13□□□□□ -0.33
KLHL42-203ENST00000540301 ABCC5O15440 1437 aa12.99□□□□□ -0.33
KLHL42-203ENST00000540301 YY1P25490 414 aa12.99□□□□□ -0.33
KLHL42-203ENST00000540301 RPRD2Q5VT52 1461 aaKnown RBP12.98□□□□□ -0.33
KLHL42-203ENST00000540301 BCL9LQ86UU0 1499 aa12.98□□□□□ -0.33
KLHL42-203ENST00000540301 SOS2Q07890 1332 aaPredicted RBP12.98□□□□□ -0.33
KLHL42-203ENST00000540301 C1orf167Q5SNV9 1468 aa12.95□□□□□ -0.34
KLHL42-203ENST00000540301 CROCC2H7BZ55 1655 aa12.95□□□□□ -0.34
KLHL42-203ENST00000540301 ADGRL3Q9HAR2 1447 aa12.95□□□□□ -0.34
KLHL42-203ENST00000540301 XRN1Q8IZH2 1706 aaKnown RBP12.94□□□□□ -0.34
KLHL42-203ENST00000540301 LAMC1P11047 1609 aa12.94□□□□□ -0.34
KLHL42-203ENST00000540301 UNC13BO14795 1591 aa12.94□□□□□ -0.34
KLHL42-203ENST00000540301 ANKRD30AQ9BXX3 1397 aa12.94□□□□□ -0.34
KLHL42-203ENST00000540301 ORAI2Q96SN7 254 aa12.93□□□□□ -0.34
KLHL42-203ENST00000540301 CHIC2Q9UKJ5 165 aa12.93□□□□□ -0.34
KLHL42-203ENST00000540301 RALGAPBQ86X10 1494 aa12.92□□□□□ -0.34
KLHL42-203ENST00000540301 COL22A1Q8NFW1 1626 aaPredicted RBP12.92□□□□□ -0.34
KLHL42-203ENST00000540301 DAPK1P53355 1430 aa12.92□□□□□ -0.34
KLHL42-203ENST00000540301 MYOM2P54296 1465 aa12.91□□□□□ -0.34
KLHL42-203ENST00000540301 BRWD3Q6RI45 1802 aa12.91□□□□□ -0.34
KLHL42-203ENST00000540301 BAG6P46379 1132 aa12.91□□□□□ -0.34
KLHL42-203ENST00000540301 UNC5CLQ8IV45 518 aa12.91□□□□□ -0.34
KLHL42-203ENST00000540301 GLI3P10071 1580 aa12.9□□□□□ -0.34
KLHL42-203ENST00000540301 KANK4Q5T7N3 995 aaPredicted RBP12.9□□□□□ -0.34
KLHL42-203ENST00000540301 IFFO2Q5TF58 517 aa12.9□□□□□ -0.34
KLHL42-203ENST00000540301 SEPT12Q8IYM1 358 aa12.9□□□□□ -0.34
KLHL42-203ENST00000540301 METP08581 1390 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms