RNA–Protein interactions for RNA: ENST00000539770.5

ARL6IP4-216, Transcript of ADP ribosylation factor like GTPase 6 interacting protein 4, human

TSL 1 (best)

Gene ARL6IP4, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARL6IP4-216	ENST00000539770	CHGA	P10645	457 aa	Known RBP	33.33	■■■□□ 2.93
ARL6IP4-216	ENST00000539770	SLC4A1AP	Q9BWU0	796 aa	Known RBP	33.32	■■■□□ 2.92
ARL6IP4-216	ENST00000539770	SETD5	Q9C0A6	1442 aa		33.3	■■■□□ 2.92
ARL6IP4-216	ENST00000539770	CLTCL1	P53675	1640 aa		33.3	■■■□□ 2.92
ARL6IP4-216	ENST00000539770	PLEKHG1	Q9ULL1	1385 aa		33.25	■■■□□ 2.91
ARL6IP4-216	ENST00000539770	STRCP1	A6NGW2	1772 aa		33.24	■■■□□ 2.91
ARL6IP4-216	ENST00000539770	PPP1R15A	O75807	674 aa	Predicted RBP	33.24	■■■□□ 2.91
ARL6IP4-216	ENST00000539770	HDGF	P51858	240 aa	Known RBP	33.24	■■■□□ 2.91
ARL6IP4-216	ENST00000539770	ACIN1	Q9UKV3	1341 aa	Known RBP	33.24	■■■□□ 2.91
ARL6IP4-216	ENST00000539770	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	33.22	■■■□□ 2.91
ARL6IP4-216	ENST00000539770	RAB3GAP2	Q9H2M9	1393 aa		33.2	■■■□□ 2.9
ARL6IP4-216	ENST00000539770	SLC26A8	Q96RN1	970 aa		33.18	■■■□□ 2.9
ARL6IP4-216	ENST00000539770	LRRC7	Q96NW7	1537 aa		33.17	■■■□□ 2.9
ARL6IP4-216	ENST00000539770	BCAN	Q96GW7	911 aa		33.16	■■■□□ 2.9
ARL6IP4-216	ENST00000539770	MPHOSPH9	Q99550	1183 aa		33.16	■■■□□ 2.9
ARL6IP4-216	ENST00000539770	MED1	Q15648	1581 aa	Predicted RBP	33.15	■■■□□ 2.9
ARL6IP4-216	ENST00000539770	KIF1B	O60333	1816 aa		33.14	■■■□□ 2.9
ARL6IP4-216	ENST00000539770	FOXD1	Q16676	465 aa		33.12	■■■□□ 2.89
ARL6IP4-216	ENST00000539770	DIP2A	Q14689	1571 aa		33.12	■■■□□ 2.89
ARL6IP4-216	ENST00000539770	NWD1	Q149M9	1564 aa		33.12	■■■□□ 2.89
ARL6IP4-216	ENST00000539770	ZNF326	Q5BKZ1	582 aa	Known RBP	33.11	■■■□□ 2.89
ARL6IP4-216	ENST00000539770	NUTM2D	Q5VT03	806 aa	Predicted RBP	33.11	■■■□□ 2.89
ARL6IP4-216	ENST00000539770	TOM1	O60784	492 aa		33.1	■■■□□ 2.89
ARL6IP4-216	ENST00000539770	NEXMIF	Q5QGS0	1516 aa		33.1	■■■□□ 2.89
ARL6IP4-216	ENST00000539770	SENP3	Q9H4L4	574 aa	Predicted RBP	33.09	■■■□□ 2.89
ARL6IP4-216	ENST00000539770	ADAMTS13	Q76LX8	1427 aa		33.09	■■■□□ 2.89
ARL6IP4-216	ENST00000539770	NKTR	P30414	1462 aa	Known RBP	33.07	■■■□□ 2.88
ARL6IP4-216	ENST00000539770	HSPA1L	P34931	641 aa		33.07	■■■□□ 2.88
ARL6IP4-216	ENST00000539770	CCDC144A	A2RUR9	1427 aa		33.06	■■■□□ 2.88
ARL6IP4-216	ENST00000539770	KCNA6	P17658	529 aa		33.06	■■■□□ 2.88
ARL6IP4-216	ENST00000539770	SETBP1	Q9Y6X0	1596 aa		33.04	■■■□□ 2.88
ARL6IP4-216	ENST00000539770	TBX22	Q9Y458	520 aa		33.04	■■■□□ 2.88
ARL6IP4-216	ENST00000539770	NRXN3	Q9Y4C0	1643 aa		33.02	■■■□□ 2.88
ARL6IP4-216	ENST00000539770	ALK	Q9UM73	1620 aa		32.99	■■■□□ 2.87
ARL6IP4-216	ENST00000539770	PIP4K2B	P78356	416 aa		32.99	■■■□□ 2.87
ARL6IP4-216	ENST00000539770	SCAF1	Q9H7N4	1312 aa	Known RBP	32.99	■■■□□ 2.87
ARL6IP4-216	ENST00000539770	PIK3R4	Q99570	1358 aa		32.98	■■■□□ 2.87
ARL6IP4-216	ENST00000539770	CHD2	O14647	1828 aa	Known RBP	32.98	■■■□□ 2.87
ARL6IP4-216	ENST00000539770	XIRP1	Q702N8	1843 aa	Known RBP	32.98	■■■□□ 2.87
ARL6IP4-216	ENST00000539770	TMEM94	Q12767	1356 aa		32.96	■■■□□ 2.87
ARL6IP4-216	ENST00000539770	HRC	P23327	699 aa		32.96	■■■□□ 2.87
ARL6IP4-216	ENST00000539770	RPGRIP1L	Q68CZ1	1315 aa		32.94	■■■□□ 2.86
ARL6IP4-216	ENST00000539770	SPATA31E1	Q6ZUB1	1445 aa		32.94	■■■□□ 2.86
ARL6IP4-216	ENST00000539770	PPL	O60437	1756 aa		32.92	■■■□□ 2.86
ARL6IP4-216	ENST00000539770	PROSER2	Q86WR7	435 aa	Predicted RBP	32.91	■■■□□ 2.86
ARL6IP4-216	ENST00000539770	VGF	O15240	615 aa	Predicted RBP	32.88	■■■□□ 2.85
ARL6IP4-216	ENST00000539770	PTPRU	Q92729	1446 aa		32.86	■■■□□ 2.85
ARL6IP4-216	ENST00000539770	XRN1	Q8IZH2	1706 aa	Known RBP	32.85	■■■□□ 2.85
ARL6IP4-216	ENST00000539770	IFT172	Q9UG01	1749 aa		32.83	■■■□□ 2.85
ARL6IP4-216	ENST00000539770	RBM33	Q96EV2	1170 aa	Known RBP	32.83	■■■□□ 2.85
ARL6IP4-216	ENST00000539770	MET	P08581	1390 aa		32.83	■■■□□ 2.85
ARL6IP4-216	ENST00000539770	SETD1A	O15047	1707 aa	Known RBP	32.81	■■■□□ 2.84
ARL6IP4-216	ENST00000539770	ANKRD30B	Q9BXX2	1392 aa		32.81	■■■□□ 2.84
ARL6IP4-216	ENST00000539770	NCOA3	Q9Y6Q9	1424 aa		32.8	■■■□□ 2.84
ARL6IP4-216	ENST00000539770	RGL3	Q3MIN7	710 aa		32.8	■■■□□ 2.84
ARL6IP4-216	ENST00000539770	AMOTL2	Q9Y2J4	779 aa		32.8	■■■□□ 2.84
ARL6IP4-216	ENST00000539770	MSH6	P52701	1360 aa		32.8	■■■□□ 2.84
ARL6IP4-216	ENST00000539770	PHF23	Q9BUL5	403 aa	Predicted RBP	32.77	■■■□□ 2.84
ARL6IP4-216	ENST00000539770	ADGRF5	Q8IZF2	1346 aa		32.73	■■■□□ 2.83
ARL6IP4-216	ENST00000539770	MYOM2	P54296	1465 aa		32.7	■■■□□ 2.83
ARL6IP4-216	ENST00000539770	PIK3C2G	O75747	1445 aa		32.69	■■■□□ 2.82
ARL6IP4-216	ENST00000539770	C14orf37	Q86TY3	774 aa		32.69	■■■□□ 2.82
ARL6IP4-216	ENST00000539770	PRAG1	Q86YV5	1406 aa		32.68	■■■□□ 2.82
ARL6IP4-216	ENST00000539770	PTCH1	Q13635	1447 aa		32.68	■■■□□ 2.82
ARL6IP4-216	ENST00000539770	FAM135B	Q49AJ0	1406 aa		32.66	■■■□□ 2.82
ARL6IP4-216	ENST00000539770	NRXN1	Q9ULB1	1477 aa		32.65	■■■□□ 2.82
ARL6IP4-216	ENST00000539770	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	32.64	■■■□□ 2.82
ARL6IP4-216	ENST00000539770	DCC	P43146	1447 aa		32.62	■■■□□ 2.81
ARL6IP4-216	ENST00000539770	C19orf44	Q9H6X5	657 aa		32.62	■■■□□ 2.81
ARL6IP4-216	ENST00000539770	ROBO1	Q9Y6N7	1651 aa		32.62	■■■□□ 2.81
ARL6IP4-216	ENST00000539770	ASXL1	Q8IXJ9	1541 aa		32.61	■■■□□ 2.81
ARL6IP4-216	ENST00000539770	CADPS2	Q86UW7	1296 aa		32.59	■■■□□ 2.81
ARL6IP4-216	ENST00000539770	ADGRL3	Q9HAR2	1447 aa		32.59	■■■□□ 2.81
ARL6IP4-216	ENST00000539770	ROBO2	Q9HCK4	1378 aa		32.58	■■■□□ 2.81
ARL6IP4-216	ENST00000539770	LAMC1	P11047	1609 aa		32.58	■■■□□ 2.81
ARL6IP4-216	ENST00000539770	SLAIN2	Q9P270	581 aa		32.57	■■■□□ 2.8
ARL6IP4-216	ENST00000539770	NALCN	Q8IZF0	1738 aa		32.57	■■■□□ 2.8
ARL6IP4-216	ENST00000539770	ATF3	P18847	181 aa		32.56	■■■□□ 2.8
ARL6IP4-216	ENST00000539770	TECPR2	O15040	1411 aa		32.53	■■■□□ 2.8
ARL6IP4-216	ENST00000539770	LRPPRC	P42704	1394 aa	Known RBP	32.52	■■■□□ 2.8
ARL6IP4-216	ENST00000539770	KNDC1	Q76NI1	1749 aa		32.51	■■■□□ 2.8
ARL6IP4-216	ENST00000539770	TRIM26	Q12899	539 aa	Predicted RBP	32.51	■■■□□ 2.79
ARL6IP4-216	ENST00000539770	C14orf93	Q9H972	538 aa	Known RBP	32.49	■■■□□ 2.79
ARL6IP4-216	ENST00000539770	RGS17	Q9UGC6	210 aa	Predicted RBP	32.49	■■■□□ 2.79
ARL6IP4-216	ENST00000539770	YTHDC2	Q9H6S0	1430 aa	Known RBP	32.47	■■■□□ 2.79
ARL6IP4-216	ENST00000539770	DHX57	Q6P158	1386 aa	Known RBP	32.46	■■■□□ 2.79
ARL6IP4-216	ENST00000539770	ABCC11	Q96J66	1382 aa		32.46	■■■□□ 2.79
ARL6IP4-216	ENST00000539770	MST1R	Q04912	1400 aa		32.46	■■■□□ 2.79
ARL6IP4-216	ENST00000539770	TMEM132E	Q6IEE7	984 aa		32.46	■■■□□ 2.79
ARL6IP4-216	ENST00000539770	DCAF11	Q8TEB1	546 aa		32.46	■■■□□ 2.79
ARL6IP4-216	ENST00000539770	CFAP70	Q5T0N1	1121 aa		32.45	■■■□□ 2.79
ARL6IP4-216	ENST00000539770	STAC3	Q96MF2	364 aa		32.45	■■■□□ 2.79
ARL6IP4-216	ENST00000539770	STK26	Q9P289	416 aa		32.44	■■■□□ 2.78
ARL6IP4-216	ENST00000539770	KDM2A	Q9Y2K7	1162 aa		32.42	■■■□□ 2.78
ARL6IP4-216	ENST00000539770	PHLPP1	O60346	1717 aa		32.4	■■■□□ 2.78
ARL6IP4-216	ENST00000539770	ADGRB1	O14514	1584 aa		32.4	■■■□□ 2.78
ARL6IP4-216	ENST00000539770	CDC42BPG	Q6DT37	1551 aa		32.4	■■■□□ 2.78
ARL6IP4-216	ENST00000539770	AHDC1	Q5TGY3	1603 aa	Predicted RBP	32.39	■■■□□ 2.78
ARL6IP4-216	ENST00000539770	BRINP3	Q76B58	766 aa		32.37	■■■□□ 2.77
ARL6IP4-216	ENST00000539770	COL16A1	Q07092	1604 aa	Predicted RBP	32.36	■■■□□ 2.77

Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms