RNA–Protein interactions for RNA: ENST00000539736.5

C12orf43-208, Transcript of chromosome 12 open reading frame 43, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene C12orf43, Length 1,033 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf43-208ENST00000539736 IFT172Q9UG01 1749 aa30.76■■■□□ 2.52
C12orf43-208ENST00000539736 NEXMIFQ5QGS0 1516 aa30.76■■■□□ 2.51
C12orf43-208ENST00000539736 PPLO60437 1756 aa30.74■■■□□ 2.51
C12orf43-208ENST00000539736 TMEM2Q9UHN6 1383 aa30.74■■■□□ 2.51
C12orf43-208ENST00000539736 PPP1R15AO75807 674 aaPredicted RBP30.73■■■□□ 2.51
C12orf43-208ENST00000539736 SLIT1O75093 1534 aa30.72■■■□□ 2.51
C12orf43-208ENST00000539736 ZFYVE9O95405 1425 aa30.72■■■□□ 2.51
C12orf43-208ENST00000539736 RIMS2Q9UQ26 1411 aa30.72■■■□□ 2.51
C12orf43-208ENST00000539736 MYOM2P54296 1465 aa30.71■■■□□ 2.51
C12orf43-208ENST00000539736 ARHGAP23Q9P227 1491 aa30.71■■■□□ 2.51
C12orf43-208ENST00000539736 HDGFP51858 240 aaKnown RBP30.7■■■□□ 2.51
C12orf43-208ENST00000539736 KDM2AQ9Y2K7 1162 aa30.7■■■□□ 2.51
C12orf43-208ENST00000539736 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.69■■■□□ 2.5
C12orf43-208ENST00000539736 VGFO15240 615 aaPredicted RBP30.68■■■□□ 2.5
C12orf43-208ENST00000539736 LMTK3Q96Q04 1460 aa30.64■■■□□ 2.5
C12orf43-208ENST00000539736 NRXN1Q9ULB1 1477 aa30.64■■■□□ 2.5
C12orf43-208ENST00000539736 PRAG1Q86YV5 1406 aa30.63■■■□□ 2.49
C12orf43-208ENST00000539736 EID1Q9Y6B2 187 aa30.62■■■□□ 2.49
C12orf43-208ENST00000539736 ADGRF5Q8IZF2 1346 aa30.62■■■□□ 2.49
C12orf43-208ENST00000539736 NUTM2DQ5VT03 806 aaPredicted RBP30.6■■■□□ 2.49
C12orf43-208ENST00000539736 TXNDC2Q86VQ3 553 aa30.6■■■□□ 2.49
C12orf43-208ENST00000539736 LTKP29376 864 aa30.59■■■□□ 2.49
C12orf43-208ENST00000539736 NBPF8Q3BBV2 869 aa30.58■■■□□ 2.49
C12orf43-208ENST00000539736 SCAF11Q99590 1463 aaKnown RBP30.57■■■□□ 2.48
C12orf43-208ENST00000539736 ANKLE2Q86XL3 938 aa30.57■■■□□ 2.48
C12orf43-208ENST00000539736 PIK3C2GO75747 1445 aa30.56■■■□□ 2.48
C12orf43-208ENST00000539736 PLEKHG1Q9ULL1 1385 aa30.54■■■□□ 2.48
C12orf43-208ENST00000539736 KIAA1210Q9ULL0 1709 aa30.5■■■□□ 2.47
C12orf43-208ENST00000539736 SETBP1Q9Y6X0 1596 aa30.5■■■□□ 2.47
C12orf43-208ENST00000539736 TRPM1Q7Z4N2 1603 aa30.49■■■□□ 2.47
C12orf43-208ENST00000539736 HSPA2P54652 639 aa30.49■■■□□ 2.47
C12orf43-208ENST00000539736 C14orf93Q9H972 538 aaKnown RBP30.49■■■□□ 2.47
C12orf43-208ENST00000539736 POLR1AO95602 1720 aaPredicted RBP30.49■■■□□ 2.47
C12orf43-208ENST00000539736 RALGAPBQ86X10 1494 aa30.48■■■□□ 2.47
C12orf43-208ENST00000539736 MED14O60244 1454 aa30.47■■■□□ 2.47
C12orf43-208ENST00000539736 LAMC1P11047 1609 aa30.47■■■□□ 2.47
C12orf43-208ENST00000539736 NRXN3Q9Y4C0 1643 aa30.46■■■□□ 2.47
C12orf43-208ENST00000539736 CFAP70Q5T0N1 1121 aa30.45■■■□□ 2.47
C12orf43-208ENST00000539736 NCKAP5LQ9HCH0 1330 aa30.44■■■□□ 2.46
C12orf43-208ENST00000539736 ALKQ9UM73 1620 aa30.44■■■□□ 2.46
C12orf43-208ENST00000539736 FBXO41Q8TF61 875 aa30.43■■■□□ 2.46
C12orf43-208ENST00000539736 IQGAP1P46940 1657 aa30.42■■■□□ 2.46
C12orf43-208ENST00000539736 NPHP4O75161 1426 aaPredicted RBP30.41■■■□□ 2.46
C12orf43-208ENST00000539736 ADAMTS13Q76LX8 1427 aa30.41■■■□□ 2.46
C12orf43-208ENST00000539736 BCANQ96GW7 911 aa30.41■■■□□ 2.46
C12orf43-208ENST00000539736 GPRASP1Q5JY77 1395 aa30.4■■■□□ 2.46
C12orf43-208ENST00000539736 NBPF1Q3BBV0 1214 aa30.39■■■□□ 2.46
C12orf43-208ENST00000539736 DIP2AQ14689 1571 aa30.39■■■□□ 2.46
C12orf43-208ENST00000539736 ROCK2O75116 1388 aaKnown RBP30.39■■■□□ 2.45
C12orf43-208ENST00000539736 SETD1AO15047 1707 aaKnown RBP30.39■■■□□ 2.45
C12orf43-208ENST00000539736 TBX22Q9Y458 520 aa30.38■■■□□ 2.45
C12orf43-208ENST00000539736 STRCQ7RTU9 1775 aa30.37■■■□□ 2.45
C12orf43-208ENST00000539736 SENP3Q9H4L4 574 aaPredicted RBP30.36■■■□□ 2.45
C12orf43-208ENST00000539736 ADGRB1O14514 1584 aa30.36■■■□□ 2.45
C12orf43-208ENST00000539736 SLC26A8Q96RN1 970 aa30.32■■■□□ 2.44
C12orf43-208ENST00000539736 CARD11Q9BXL7 1154 aa30.32■■■□□ 2.44
C12orf43-208ENST00000539736 ASXL1Q8IXJ9 1541 aa30.32■■■□□ 2.44
C12orf43-208ENST00000539736 METP08581 1390 aa30.29■■■□□ 2.44
C12orf43-208ENST00000539736 TMEM132EQ6IEE7 984 aa30.29■■■□□ 2.44
C12orf43-208ENST00000539736 PIK3R4Q99570 1358 aa30.28■■■□□ 2.44
C12orf43-208ENST00000539736 YTHDC2Q9H6S0 1430 aaKnown RBP30.24■■■□□ 2.43
C12orf43-208ENST00000539736 LRPPRCP42704 1394 aaKnown RBP30.24■■■□□ 2.43
C12orf43-208ENST00000539736 DMRT2Q9Y5R5 561 aa30.23■■■□□ 2.43
C12orf43-208ENST00000539736 ABCC11Q96J66 1382 aa30.21■■■□□ 2.43
C12orf43-208ENST00000539736 USP47Q96K76 1375 aa30.2■■■□□ 2.43
C12orf43-208ENST00000539736 EIF4G2P78344 907 aaKnown RBP eCLIP30.19■■■□□ 2.42
C12orf43-208ENST00000539736 PTPRUQ92729 1446 aa30.19■■■□□ 2.42
C12orf43-208ENST00000539736 TECPR2O15040 1411 aa30.18■■■□□ 2.42
C12orf43-208ENST00000539736 KNDC1Q76NI1 1749 aa30.18■■■□□ 2.42
C12orf43-208ENST00000539736 CHD2O14647 1828 aaKnown RBP30.17■■■□□ 2.42
C12orf43-208ENST00000539736 TRAK1Q9UPV9 953 aa30.17■■■□□ 2.42
C12orf43-208ENST00000539736 DLC1Q96QB1 1528 aa30.17■■■□□ 2.42
C12orf43-208ENST00000539736 STK26Q9P289 416 aa30.16■■■□□ 2.42
C12orf43-208ENST00000539736 EIF3AQ14152 1382 aaKnown RBP30.15■■■□□ 2.42
C12orf43-208ENST00000539736 SIRT1Q96EB6 747 aa30.15■■■□□ 2.42
C12orf43-208ENST00000539736 AMOTL2Q9Y2J4 779 aa30.15■■■□□ 2.42
C12orf43-208ENST00000539736 XRN1Q8IZH2 1706 aaKnown RBP30.13■■■□□ 2.41
C12orf43-208ENST00000539736 HSPA5P11021 654 aaKnown RBP30.13■■■□□ 2.41
C12orf43-208ENST00000539736 KCNA6P17658 529 aa30.13■■■□□ 2.41
C12orf43-208ENST00000539736 ARHGEF28Q8N1W1 1705 aaKnown RBP30.13■■■□□ 2.41
C12orf43-208ENST00000539736 CPS1P31327 1500 aa30.12■■■□□ 2.41
C12orf43-208ENST00000539736 NWD1Q149M9 1564 aa30.11■■■□□ 2.41
C12orf43-208ENST00000539736 FAM135BQ49AJ0 1406 aa30.1■■■□□ 2.41
C12orf43-208ENST00000539736 PTCH1Q13635 1447 aa30.09■■■□□ 2.41
C12orf43-208ENST00000539736 ST20-MTHFSA0A0A6YYL1 179 aa30.08■■■□□ 2.41
C12orf43-208ENST00000539736 ROBO2Q9HCK4 1378 aa30.06■■■□□ 2.4
C12orf43-208ENST00000539736 CENPJQ9HC77 1338 aaPredicted RBP30.06■■■□□ 2.4
C12orf43-208ENST00000539736 PRAM1Q96QH2 718 aa30.05■■■□□ 2.4
C12orf43-208ENST00000539736 POGKQ9P215 609 aa30.03■■■□□ 2.4
C12orf43-208ENST00000539736 NKTRP30414 1462 aaKnown RBP30.02■■■□□ 2.4
C12orf43-208ENST00000539736 SBNO2Q9Y2G9 1366 aa30.02■■■□□ 2.4
C12orf43-208ENST00000539736 WAPLQ7Z5K2 1190 aa30.01■■■□□ 2.39
C12orf43-208ENST00000539736 SLC24A1O60721 1099 aa30■■■□□ 2.39
C12orf43-208ENST00000539736 TESK2Q96S53 571 aa30■■■□□ 2.39
C12orf43-208ENST00000539736 STRCP1A6NGW2 1772 aa30■■■□□ 2.39
C12orf43-208ENST00000539736 QRICH2Q9H0J4 1663 aa29.99■■■□□ 2.39
C12orf43-208ENST00000539736 HIRIP3Q9BW71 556 aaPredicted RBP29.99■■■□□ 2.39
C12orf43-208ENST00000539736 PLEKHH1Q9ULM0 1364 aa29.99■■■□□ 2.39
C12orf43-208ENST00000539736 ZNF335Q9H4Z2 1342 aaPredicted RBP29.96■■■□□ 2.39
C12orf43-208ENST00000539736 ILDR2Q71H61 639 aa29.94■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms