RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 PPLO60437 1756 aa14.66□□□□□ -0.06
CLPB-210ENST00000539148 VGFO15240 615 aaPredicted RBP14.66□□□□□ -0.06
CLPB-210ENST00000539148 RGL3Q3MIN7 710 aa14.66□□□□□ -0.06
CLPB-210ENST00000539148 IFT172Q9UG01 1749 aa14.65□□□□□ -0.06
CLPB-210ENST00000539148 LMTK3Q96Q04 1460 aa14.64□□□□□ -0.07
CLPB-210ENST00000539148 PPP1R15AO75807 674 aaPredicted RBP14.63□□□□□ -0.07
CLPB-210ENST00000539148 DCAF11Q8TEB1 546 aa14.63□□□□□ -0.07
CLPB-210ENST00000539148 TMEM2Q9UHN6 1383 aa14.62□□□□□ -0.07
CLPB-210ENST00000539148 FBXO41Q8TF61 875 aa14.62□□□□□ -0.07
CLPB-210ENST00000539148 MYOM2P54296 1465 aa14.62□□□□□ -0.07
CLPB-210ENST00000539148 SLIT1O75093 1534 aa14.61□□□□□ -0.07
CLPB-210ENST00000539148 POLR1AO95602 1720 aaPredicted RBP14.61□□□□□ -0.07
CLPB-210ENST00000539148 ZFYVE9O95405 1425 aa14.61□□□□□ -0.07
CLPB-210ENST00000539148 ANKLE2Q86XL3 938 aa14.61□□□□□ -0.07
CLPB-210ENST00000539148 L3MBTL2Q969R5 705 aa14.61□□□□□ -0.07
CLPB-210ENST00000539148 RIMS2Q9UQ26 1411 aa14.6□□□□□ -0.07
CLPB-210ENST00000539148 LAMC1P11047 1609 aa14.6□□□□□ -0.07
CLPB-210ENST00000539148 NEXMIFQ5QGS0 1516 aa14.6□□□□□ -0.07
CLPB-210ENST00000539148 ARHGAP23Q9P227 1491 aa14.58□□□□□ -0.08
CLPB-210ENST00000539148 KDM2AQ9Y2K7 1162 aa14.58□□□□□ -0.08
CLPB-210ENST00000539148 KIAA1210Q9ULL0 1709 aa14.58□□□□□ -0.08
CLPB-210ENST00000539148 TXNDC2Q86VQ3 553 aa14.57□□□□□ -0.08
CLPB-210ENST00000539148 BCANQ96GW7 911 aa14.57□□□□□ -0.08
CLPB-210ENST00000539148 SCAF11Q99590 1463 aaKnown RBP14.57□□□□□ -0.08
CLPB-210ENST00000539148 DMRT2Q9Y5R5 561 aa14.54□□□□□ -0.08
CLPB-210ENST00000539148 PLEKHG1Q9ULL1 1385 aa14.54□□□□□ -0.08
CLPB-210ENST00000539148 DIP2AQ14689 1571 aa14.53□□□□□ -0.08
CLPB-210ENST00000539148 NRXN1Q9ULB1 1477 aa14.52□□□□□ -0.08
CLPB-210ENST00000539148 PRAG1Q86YV5 1406 aa14.52□□□□□ -0.08
CLPB-210ENST00000539148 IQGAP1P46940 1657 aa14.52□□□□□ -0.09
CLPB-210ENST00000539148 HSPA2P54652 639 aa14.51□□□□□ -0.09
CLPB-210ENST00000539148 SETBP1Q9Y6X0 1596 aa14.51□□□□□ -0.09
CLPB-210ENST00000539148 MED14O60244 1454 aa14.5□□□□□ -0.09
CLPB-210ENST00000539148 PIK3C2GO75747 1445 aa14.5□□□□□ -0.09
CLPB-210ENST00000539148 TRPM1Q7Z4N2 1603 aa14.5□□□□□ -0.09
CLPB-210ENST00000539148 NPHP4O75161 1426 aaPredicted RBP14.49□□□□□ -0.09
CLPB-210ENST00000539148 ADGRF5Q8IZF2 1346 aa14.48□□□□□ -0.09
CLPB-210ENST00000539148 NUTM2DQ5VT03 806 aaPredicted RBP14.48□□□□□ -0.09
CLPB-210ENST00000539148 C14orf93Q9H972 538 aaKnown RBP14.48□□□□□ -0.09
CLPB-210ENST00000539148 RALGAPBQ86X10 1494 aa14.47□□□□□ -0.09
CLPB-210ENST00000539148 LTKP29376 864 aa14.47□□□□□ -0.09
CLPB-210ENST00000539148 TBX22Q9Y458 520 aa14.47□□□□□ -0.09
CLPB-210ENST00000539148 ALKQ9UM73 1620 aa14.47□□□□□ -0.09
CLPB-210ENST00000539148 ROCK2O75116 1388 aaKnown RBP14.47□□□□□ -0.09
CLPB-210ENST00000539148 PIK3R4Q99570 1358 aa14.47□□□□□ -0.09
CLPB-210ENST00000539148 SLC24A1O60721 1099 aa14.46□□□□□ -0.09
CLPB-210ENST00000539148 EIF3AQ14152 1382 aaKnown RBP14.45□□□□□ -0.1
CLPB-210ENST00000539148 STRCQ7RTU9 1775 aa14.45□□□□□ -0.1
CLPB-210ENST00000539148 NCKAP5LQ9HCH0 1330 aa14.43□□□□□ -0.1
CLPB-210ENST00000539148 CARD11Q9BXL7 1154 aa14.43□□□□□ -0.1
CLPB-210ENST00000539148 NRXN3Q9Y4C0 1643 aa14.43□□□□□ -0.1
CLPB-210ENST00000539148 SETD1AO15047 1707 aaKnown RBP14.42□□□□□ -0.1
CLPB-210ENST00000539148 NBPF8Q3BBV2 869 aa14.42□□□□□ -0.1
CLPB-210ENST00000539148 CFAP70Q5T0N1 1121 aa14.42□□□□□ -0.1
CLPB-210ENST00000539148 CHD2O14647 1828 aaKnown RBP14.41□□□□□ -0.1
CLPB-210ENST00000539148 GPRASP1Q5JY77 1395 aa14.41□□□□□ -0.1
CLPB-210ENST00000539148 KNDC1Q76NI1 1749 aa14.41□□□□□ -0.1
CLPB-210ENST00000539148 ADAMTS13Q76LX8 1427 aa14.41□□□□□ -0.1
CLPB-210ENST00000539148 SLC26A8Q96RN1 970 aa14.4□□□□□ -0.1
CLPB-210ENST00000539148 EIF4G2P78344 907 aaKnown RBP eCLIP14.39□□□□□ -0.11
CLPB-210ENST00000539148 CERKQ8TCT0 537 aa14.39□□□□□ -0.11
CLPB-210ENST00000539148 YTHDC2Q9H6S0 1430 aaKnown RBP14.38□□□□□ -0.11
CLPB-210ENST00000539148 ADGRB1O14514 1584 aa14.38□□□□□ -0.11
CLPB-210ENST00000539148 LRPPRCP42704 1394 aaKnown RBP14.37□□□□□ -0.11
CLPB-210ENST00000539148 SIRT1Q96EB6 747 aa14.37□□□□□ -0.11
CLPB-210ENST00000539148 DLC1Q96QB1 1528 aa14.36□□□□□ -0.11
CLPB-210ENST00000539148 ABCC11Q96J66 1382 aa14.36□□□□□ -0.11
CLPB-210ENST00000539148 KCNA6P17658 529 aa14.35□□□□□ -0.11
CLPB-210ENST00000539148 NBPF1Q3BBV0 1214 aa14.35□□□□□ -0.11
CLPB-210ENST00000539148 ARHGEF28Q8N1W1 1705 aaKnown RBP14.35□□□□□ -0.11
CLPB-210ENST00000539148 METP08581 1390 aa14.34□□□□□ -0.11
CLPB-210ENST00000539148 USP47Q96K76 1375 aa14.34□□□□□ -0.11
CLPB-210ENST00000539148 TECPR2O15040 1411 aa14.34□□□□□ -0.11
CLPB-210ENST00000539148 FAM135BQ49AJ0 1406 aa14.34□□□□□ -0.11
CLPB-210ENST00000539148 NKTRP30414 1462 aaKnown RBP14.34□□□□□ -0.11
CLPB-210ENST00000539148 TMEM132EQ6IEE7 984 aa14.34□□□□□ -0.11
CLPB-210ENST00000539148 SENP3Q9H4L4 574 aaPredicted RBP14.34□□□□□ -0.11
CLPB-210ENST00000539148 POGKQ9P215 609 aa14.34□□□□□ -0.11
CLPB-210ENST00000539148 AMOTL2Q9Y2J4 779 aa14.34□□□□□ -0.11
CLPB-210ENST00000539148 CPS1P31327 1500 aa14.34□□□□□ -0.11
CLPB-210ENST00000539148 NWD1Q149M9 1564 aa14.34□□□□□ -0.11
CLPB-210ENST00000539148 PTCH1Q13635 1447 aa14.33□□□□□ -0.11
CLPB-210ENST00000539148 XRN1Q8IZH2 1706 aaKnown RBP14.33□□□□□ -0.12
CLPB-210ENST00000539148 STK26Q9P289 416 aa14.33□□□□□ -0.12
CLPB-210ENST00000539148 TRAK1Q9UPV9 953 aa14.33□□□□□ -0.12
CLPB-210ENST00000539148 CDCA8Q53HL2 280 aa14.32□□□□□ -0.12
CLPB-210ENST00000539148 CENPJQ9HC77 1338 aaPredicted RBP14.32□□□□□ -0.12
CLPB-210ENST00000539148 ASXL1Q8IXJ9 1541 aa14.31□□□□□ -0.12
CLPB-210ENST00000539148 QRICH2Q9H0J4 1663 aa14.31□□□□□ -0.12
CLPB-210ENST00000539148 SBNO2Q9Y2G9 1366 aa14.3□□□□□ -0.12
CLPB-210ENST00000539148 NCOA3Q9Y6Q9 1424 aa14.3□□□□□ -0.12
CLPB-210ENST00000539148 ZNF316A6NFI3 1004 aaPredicted RBP14.28□□□□□ -0.12
CLPB-210ENST00000539148 PROSER2Q86WR7 435 aaPredicted RBP14.28□□□□□ -0.12
CLPB-210ENST00000539148 TMF1P82094 1093 aa14.27□□□□□ -0.13
CLPB-210ENST00000539148 C14orf37Q86TY3 774 aa14.27□□□□□ -0.13
CLPB-210ENST00000539148 PRAM1Q96QH2 718 aa14.27□□□□□ -0.13
CLPB-210ENST00000539148 PTPRUQ92729 1446 aa14.26□□□□□ -0.13
CLPB-210ENST00000539148 ST20-MTHFSA0A0A6YYL1 179 aa14.26□□□□□ -0.13
CLPB-210ENST00000539148 HSPA5P11021 654 aaKnown RBP14.26□□□□□ -0.13
CLPB-210ENST00000539148 EVC2Q86UK5 1308 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms