RNA–Protein interactions for RNA: ENST00000538367.5

TRA2A-211, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRA2A, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-211ENST00000538367 NLRP1Q9C000 1473 aa22.93■■□□□ 1.26
TRA2A-211ENST00000538367 SAMD9LQ8IVG5 1584 aa22.92■■□□□ 1.26
TRA2A-211ENST00000538367 ISY1Q9ULR0 285 aaKnown RBP22.92■■□□□ 1.26
TRA2A-211ENST00000538367 ANKRD30AQ9BXX3 1397 aa22.92■■□□□ 1.26
TRA2A-211ENST00000538367 NINLQ9Y2I6 1382 aa22.92■■□□□ 1.26
TRA2A-211ENST00000538367 SHANK2Q9UPX8 1470 aa22.91■■□□□ 1.26
TRA2A-211ENST00000538367 GPRASP1Q5JY77 1395 aa22.91■■□□□ 1.26
TRA2A-211ENST00000538367 GOLGA6L3A6NEY3 463 aa22.91■■□□□ 1.26
TRA2A-211ENST00000538367 ANTXR1Q9H6X2 564 aa22.91■■□□□ 1.26
TRA2A-211ENST00000538367 PLCH2O75038 1416 aa22.91■■□□□ 1.26
TRA2A-211ENST00000538367 ZNF521Q96K83 1311 aa22.9■■□□□ 1.26
TRA2A-211ENST00000538367 DUSP27Q5VZP5 1158 aa22.9■■□□□ 1.26
TRA2A-211ENST00000538367 VSIG10Q8N0Z9 540 aa22.9■■□□□ 1.26
TRA2A-211ENST00000538367 NAP1L5Q96NT1 182 aaPredicted RBP22.9■■□□□ 1.26
TRA2A-211ENST00000538367 ARAP3Q8WWN8 1544 aa22.88■■□□□ 1.25
TRA2A-211ENST00000538367 PRDM15P57071 1507 aaPredicted RBP22.88■■□□□ 1.25
TRA2A-211ENST00000538367 ANKRD50Q9ULJ7 1429 aa22.87■■□□□ 1.25
TRA2A-211ENST00000538367 ARHGEF5Q12774 1597 aa22.87■■□□□ 1.25
TRA2A-211ENST00000538367 XRCC6P12956 609 aaKnown RBP eCLIP22.85■■□□□ 1.254e-7■□□□□ 9.8
TRA2A-211ENST00000538367 CENPJQ9HC77 1338 aaPredicted RBP22.85■■□□□ 1.25
TRA2A-211ENST00000538367 PRAG1Q86YV5 1406 aa22.85■■□□□ 1.25
TRA2A-211ENST00000538367 EIF2AK4Q9P2K8 1649 aaKnown RBP22.84■■□□□ 1.25
TRA2A-211ENST00000538367 PLXNC1O60486 1568 aa22.84■■□□□ 1.25
TRA2A-211ENST00000538367 RGS3P49796 1198 aa22.84■■□□□ 1.25
TRA2A-211ENST00000538367 MRE11P49959 708 aa22.82■■□□□ 1.24
TRA2A-211ENST00000538367 GOLGA2Q08379 1002 aa22.82■■□□□ 1.24
TRA2A-211ENST00000538367 EFCAB2Q5VUJ9 269 aa22.82■■□□□ 1.24
TRA2A-211ENST00000538367 SYCP2Q9BX26 1530 aa22.81■■□□□ 1.24
TRA2A-211ENST00000538367 PLEKHH1Q9ULM0 1364 aa22.81■■□□□ 1.24
TRA2A-211ENST00000538367 AAMPQ13685 434 aa22.81■■□□□ 1.24
TRA2A-211ENST00000538367 CGNL1Q0VF96 1302 aa22.81■■□□□ 1.24
TRA2A-211ENST00000538367 NKTRP30414 1462 aaKnown RBP22.8■■□□□ 1.24
TRA2A-211ENST00000538367 TPM2P07951 284 aa22.8■■□□□ 1.24
TRA2A-211ENST00000538367 TRMT2AQ8IZ69 625 aaKnown RBP22.8■■□□□ 1.24
TRA2A-211ENST00000538367 HNRNPMP52272 730 aaKnown RBP eCLIP22.79■■□□□ 1.24
TRA2A-211ENST00000538367 CCDC141Q6ZP82 1450 aa22.79■■□□□ 1.24
TRA2A-211ENST00000538367 UPF2Q9HAU5 1272 aaKnown RBP22.79■■□□□ 1.24
TRA2A-211ENST00000538367 RSPH4AQ5TD94 716 aa22.78■■□□□ 1.24
TRA2A-211ENST00000538367 ABCC1P33527 1531 aa22.77■■□□□ 1.24
TRA2A-211ENST00000538367 SLFN5Q08AF3 891 aa22.77■■□□□ 1.24
TRA2A-211ENST00000538367 NGEFQ8N5V2 710 aa22.76■■□□□ 1.23
TRA2A-211ENST00000538367 FANCAO15360 1455 aa22.76■■□□□ 1.23
TRA2A-211ENST00000538367 MCM4P33991 863 aa22.76■■□□□ 1.23
TRA2A-211ENST00000538367 PDE3AQ14432 1141 aa22.75■■□□□ 1.23
TRA2A-211ENST00000538367 TBC1D32Q96NH3 1257 aa22.75■■□□□ 1.23
TRA2A-211ENST00000538367 PIK3C2GO75747 1445 aa22.75■■□□□ 1.23
TRA2A-211ENST00000538367 C9orf84Q5VXU9 1444 aa22.75■■□□□ 1.23
TRA2A-211ENST00000538367 ERBINQ96RT1 1412 aa22.75■■□□□ 1.23
TRA2A-211ENST00000538367 NUP155O75694 1391 aa22.75■■□□□ 1.23
TRA2A-211ENST00000538367 TSPY4P0CV99 314 aa22.74■■□□□ 1.23
TRA2A-211ENST00000538367 TSPY10P0CW01 314 aa22.74■■□□□ 1.23
TRA2A-211ENST00000538367 SLKQ9H2G2 1235 aaPredicted RBP22.73■■□□□ 1.23
TRA2A-211ENST00000538367 ADAMTS8Q9UP79 889 aa22.73■■□□□ 1.23
TRA2A-211ENST00000538367 CD109Q6YHK3 1445 aa22.73■■□□□ 1.23
TRA2A-211ENST00000538367 SCAPERQ9BY12 1400 aa22.73■■□□□ 1.23
TRA2A-211ENST00000538367 CFAP74Q9C0B2 1584 aa22.72■■□□□ 1.23
TRA2A-211ENST00000538367 MAST1Q9Y2H9 1570 aa22.72■■□□□ 1.23
TRA2A-211ENST00000538367 WDR43Q15061 677 aaKnown RBP eCLIP22.72■■□□□ 1.23
TRA2A-211ENST00000538367 GLI2P10070 1586 aa22.71■■□□□ 1.23
TRA2A-211ENST00000538367 RNF17Q9BXT8 1623 aaKnown RBP22.71■■□□□ 1.23
TRA2A-211ENST00000538367 ESPNB1AK53 854 aa22.7■■□□□ 1.23
TRA2A-211ENST00000538367 CC2D1BQ5T0F9 858 aaKnown RBP22.7■■□□□ 1.23
TRA2A-211ENST00000538367 PDCL3Q9H2J4 239 aa22.7■■□□□ 1.23
TRA2A-211ENST00000538367 DISP3Q9P2K9 1392 aa22.7■■□□□ 1.22
TRA2A-211ENST00000538367 TESK2Q96S53 571 aa22.7■■□□□ 1.22
TRA2A-211ENST00000538367 MAP3K4Q9Y6R4 1608 aa22.7■■□□□ 1.22
TRA2A-211ENST00000538367 DDX11L8A8MPP1 907 aa22.69■■□□□ 1.22
TRA2A-211ENST00000538367 TBC1D2Q9BYX2 928 aa22.69■■□□□ 1.22
TRA2A-211ENST00000538367 MYH16Q9H6N6 1097 aa22.69■■□□□ 1.22
TRA2A-211ENST00000538367 PANK3Q9H999 370 aa22.69■■□□□ 1.22
TRA2A-211ENST00000538367 CHMP5Q9NZZ3 219 aa22.69■■□□□ 1.22
TRA2A-211ENST00000538367 SYNMO15061 1565 aa22.68■■□□□ 1.22
TRA2A-211ENST00000538367 DIP2BQ9P265 1576 aa22.67■■□□□ 1.22
TRA2A-211ENST00000538367 NPC1L1Q9UHC9 1359 aa22.67■■□□□ 1.22
TRA2A-211ENST00000538367 TMF1P82094 1093 aa22.66■■□□□ 1.22
TRA2A-211ENST00000538367 CLUAP1Q96AJ1 413 aa22.66■■□□□ 1.22
TRA2A-211ENST00000538367 ADGRL1O94910 1474 aa22.66■■□□□ 1.22
TRA2A-211ENST00000538367 E9PSI1 815 aa22.66■■□□□ 1.22
TRA2A-211ENST00000538367 SEC24BO95487 1268 aa22.66■■□□□ 1.22
TRA2A-211ENST00000538367 PANK2Q9BZ23 570 aa22.66■■□□□ 1.22
TRA2A-211ENST00000538367 GRPEL1Q9HAV7 217 aa22.66■■□□□ 1.22
TRA2A-211ENST00000538367 TRAK2O60296 914 aa22.65■■□□□ 1.22
TRA2A-211ENST00000538367 IGHDP01880 384 aa22.65■■□□□ 1.22
TRA2A-211ENST00000538367 PMFBP1Q8TBY8 1022 aa22.65■■□□□ 1.22
TRA2A-211ENST00000538367 KDM2AQ9Y2K7 1162 aa22.65■■□□□ 1.22
TRA2A-211ENST00000538367 TRAPPC8Q9Y2L5 1435 aa22.64■■□□□ 1.22
TRA2A-211ENST00000538367 PTMSP20962 102 aa22.63■■□□□ 1.21
TRA2A-211ENST00000538367 PPP2R1AP30153 589 aa22.63■■□□□ 1.21
TRA2A-211ENST00000538367 TERF1P54274 439 aa22.63■■□□□ 1.21
TRA2A-211ENST00000538367 FAM135AQ9P2D6 1515 aa22.63■■□□□ 1.21
TRA2A-211ENST00000538367 CALD1Q05682 793 aaKnown RBP22.63■■□□□ 1.21
TRA2A-211ENST00000538367 A2MP01023 1474 aa22.61■■□□□ 1.21
TRA2A-211ENST00000538367 ASXL1Q8IXJ9 1541 aa22.61■■□□□ 1.21
TRA2A-211ENST00000538367 NEO1Q92859 1461 aa22.59■■□□□ 1.21
TRA2A-211ENST00000538367 NCOA3Q9Y6Q9 1424 aa22.59■■□□□ 1.21
TRA2A-211ENST00000538367 TRIM44Q96DX7 344 aaPredicted RBP22.59■■□□□ 1.21
TRA2A-211ENST00000538367 FAM69CQ0P6D2 419 aa22.58■■□□□ 1.21
TRA2A-211ENST00000538367 MAGI2Q86UL8 1455 aa22.58■■□□□ 1.2
TRA2A-211ENST00000538367 RTEL1-TNFRSF6BF6WH68 1400 aa22.57■■□□□ 1.2
TRA2A-211ENST00000538367 UNC13BO14795 1591 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms