RNA–Protein interactions for RNA: ENST00000537182.5

MDM2-224, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,011 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-224ENST00000537182 FAM198AQ9UFP1 575 aa8.63□□□□□ -1.03
MDM2-224ENST00000537182 TSKSQ9UJT2 592 aa8.63□□□□□ -1.03
MDM2-224ENST00000537182 RUSC2Q8N2Y8 1516 aa8.62□□□□□ -1.03
MDM2-224ENST00000537182 CCDC102AQ96A19 550 aa8.61□□□□□ -1.03
MDM2-224ENST00000537182 AK7Q96M32 723 aa8.61□□□□□ -1.03
MDM2-224ENST00000537182 SLC4A5Q9BY07 1137 aa8.61□□□□□ -1.03
MDM2-224ENST00000537182 FGD5Q6ZNL6 1462 aa8.61□□□□□ -1.03
MDM2-224ENST00000537182 CLIP1P30622 1438 aa8.61□□□□□ -1.03
MDM2-224ENST00000537182 ONECUT3O60422 494 aaPredicted RBP8.6□□□□□ -1.03
MDM2-224ENST00000537182 LSM11P83369 360 aaKnown RBP eCLIP8.6□□□□□ -1.03
MDM2-224ENST00000537182 FAM161AQ3B820 660 aa8.6□□□□□ -1.03
MDM2-224ENST00000537182 ABCA10Q8WWZ4 1543 aa8.59□□□□□ -1.03
MDM2-224ENST00000537182 TOPBP1Q92547 1522 aa8.59□□□□□ -1.03
MDM2-224ENST00000537182 CUX2O14529 1486 aa8.59□□□□□ -1.03
MDM2-224ENST00000537182 ZEB1P37275 1124 aaPredicted RBP8.59□□□□□ -1.03
MDM2-224ENST00000537182 PACS2Q86VP3 889 aa8.59□□□□□ -1.03
MDM2-224ENST00000537182 VPS9D1Q9Y2B5 631 aa8.59□□□□□ -1.03
MDM2-224ENST00000537182 ADGRG1Q9Y653 693 aa8.59□□□□□ -1.03
MDM2-224ENST00000537182 RAPGEF2Q9Y4G8 1499 aa8.58□□□□□ -1.04
MDM2-224ENST00000537182 KIAA1468Q9P260 1216 aa8.58□□□□□ -1.04
MDM2-224ENST00000537182 VPS8Q8N3P4 1428 aa8.57□□□□□ -1.04
MDM2-224ENST00000537182 NBPF26B4DH59 902 aa8.57□□□□□ -1.04
MDM2-224ENST00000537182 C3orf80F5H4A9 247 aa8.57□□□□□ -1.04
MDM2-224ENST00000537182 TK2O00142 265 aa8.57□□□□□ -1.04
MDM2-224ENST00000537182 TRIM66O15016 1216 aa8.57□□□□□ -1.04
MDM2-224ENST00000537182 OATP04181 439 aa8.57□□□□□ -1.04
MDM2-224ENST00000537182 NUDT18Q6ZVK8 323 aa8.57□□□□□ -1.04
MDM2-224ENST00000537182 RABGEF1Q9UJ41 708 aa8.57□□□□□ -1.04
MDM2-224ENST00000537182 ANKRD13DQ6ZTN6 518 aa8.56□□□□□ -1.04
MDM2-224ENST00000537182 METTL3Q86U44 580 aaKnown RBP8.56□□□□□ -1.04
MDM2-224ENST00000537182 CDAN1Q8IWY9 1227 aa8.56□□□□□ -1.04
MDM2-224ENST00000537182 RBM46Q8TBY0 533 aaKnown RBP8.56□□□□□ -1.04
MDM2-224ENST00000537182 TATDN2Q93075 761 aa8.56□□□□□ -1.04
MDM2-224ENST00000537182 KRTAP3-3Q9BYR6 98 aa8.56□□□□□ -1.04
MDM2-224ENST00000537182 KRTAP3-2Q9BYR7 98 aa8.56□□□□□ -1.04
MDM2-224ENST00000537182 PNMA3Q9UL41 463 aa8.56□□□□□ -1.04
MDM2-224ENST00000537182 CUL7Q14999 1698 aa8.56□□□□□ -1.04
MDM2-224ENST00000537182 SMAPO00193 183 aa8.55□□□□□ -1.04
MDM2-224ENST00000537182 HRCP23327 699 aa8.55□□□□□ -1.04
MDM2-224ENST00000537182 ADGRD1Q6QNK2 874 aa8.55□□□□□ -1.04
MDM2-224ENST00000537182 PXYLP1Q8TE99 480 aa8.55□□□□□ -1.04
MDM2-224ENST00000537182 IGF1RP08069 1367 aa8.55□□□□□ -1.04
MDM2-224ENST00000537182 POLA1P09884 1462 aaPredicted RBP8.55□□□□□ -1.04
MDM2-224ENST00000537182 CARMIL1Q5VZK9 1371 aa8.54□□□□□ -1.04
MDM2-224ENST00000537182 PHOX2BQ99453 314 aa8.54□□□□□ -1.04
MDM2-224ENST00000537182 EYA1Q99502 592 aa8.54□□□□□ -1.04
MDM2-224ENST00000537182 WDR97A6NE52 1622 aa8.54□□□□□ -1.04
MDM2-224ENST00000537182 NESP48681 1621 aa8.52□□□□□ -1.05
MDM2-224ENST00000537182 BHMG1C9JSJ3 638 aaPredicted RBP8.52□□□□□ -1.05
MDM2-224ENST00000537182 PDE4DQ08499 809 aa8.52□□□□□ -1.05
MDM2-224ENST00000537182 AMHR2Q16671 573 aa8.52□□□□□ -1.05
MDM2-224ENST00000537182 NBPF3Q9H094 633 aa8.52□□□□□ -1.05
MDM2-224ENST00000537182 SEPT9Q9UHD8 586 aaPredicted RBP8.52□□□□□ -1.05
MDM2-224ENST00000537182 MRC2Q9UBG0 1479 aa8.51□□□□□ -1.05
MDM2-224ENST00000537182 HRO43593 1189 aa8.51□□□□□ -1.05
MDM2-224ENST00000537182 URB2Q14146 1524 aaKnown RBP8.5□□□□□ -1.05
MDM2-224ENST00000537182 RCCD1A6NED2 376 aa8.5□□□□□ -1.05
MDM2-224ENST00000537182 NLRP7Q8WX94 980 aa8.5□□□□□ -1.05
MDM2-224ENST00000537182 FHAD1B1AJZ9 1412 aa8.49□□□□□ -1.05
MDM2-224ENST00000537182 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.49□□□□□ -1.05
MDM2-224ENST00000537182 BRPF1P55201 1214 aaPredicted RBP8.49□□□□□ -1.05
MDM2-224ENST00000537182 TTLL12Q14166 644 aaPredicted RBP8.49□□□□□ -1.05
MDM2-224ENST00000537182 FAM98CQ17RN3 349 aaKnown RBP8.49□□□□□ -1.05
MDM2-224ENST00000537182 MRPL50Q8N5N7 158 aaKnown RBP8.49□□□□□ -1.05
MDM2-224ENST00000537182 EFCAB5A4FU69 1503 aa8.49□□□□□ -1.05
MDM2-224ENST00000537182 DNAJB2P25686 324 aa8.48□□□□□ -1.05
MDM2-224ENST00000537182 MDM2Q00987 491 aaPredicted RBP8.48□□□□□ -1.05
MDM2-224ENST00000537182 NEUROD2Q15784 382 aa8.48□□□□□ -1.05
MDM2-224ENST00000537182 LAPTM4BQ86VI4 370 aa8.48□□□□□ -1.05
MDM2-224ENST00000537182 GAPVD1Q14C86 1478 aa8.47□□□□□ -1.05
MDM2-224ENST00000537182 PARP9Q8IXQ6 854 aa8.47□□□□□ -1.05
MDM2-224ENST00000537182 STAC3Q96MF2 364 aa8.47□□□□□ -1.05
MDM2-224ENST00000537182 MAP3K1Q13233 1512 aa8.47□□□□□ -1.05
MDM2-224ENST00000537182 ABCA5Q8WWZ7 1642 aa8.47□□□□□ -1.05
MDM2-224ENST00000537182 IFT140Q96RY7 1462 aa8.46□□□□□ -1.05
MDM2-224ENST00000537182 CLCN1P35523 988 aa8.46□□□□□ -1.06
MDM2-224ENST00000537182 TMUB1Q9BVT8 246 aa8.46□□□□□ -1.06
MDM2-224ENST00000537182 REPIN1Q9BWE0 567 aaKnown RBP8.46□□□□□ -1.06
MDM2-224ENST00000537182 TMEM134Q9H6X4 195 aa8.46□□□□□ -1.06
MDM2-224ENST00000537182 GPBP1L1Q9HC44 474 aaPredicted RBP8.46□□□□□ -1.06
MDM2-224ENST00000537182 GPCPD1Q9NPB8 672 aa8.46□□□□□ -1.06
MDM2-224ENST00000537182 WDR62O43379 1518 aa8.45□□□□□ -1.06
MDM2-224ENST00000537182 ZFRQ96KR1 1074 aaKnown RBP8.45□□□□□ -1.06
MDM2-224ENST00000537182 KIF21AQ7Z4S6 1674 aa8.45□□□□□ -1.06
MDM2-224ENST00000537182 RAD54L2Q9Y4B4 1467 aa8.45□□□□□ -1.06
MDM2-224ENST00000537182 GIGYF2Q6Y7W6 1299 aaKnown RBP8.44□□□□□ -1.06
MDM2-224ENST00000537182 KDM4CQ9H3R0 1056 aa8.44□□□□□ -1.06
MDM2-224ENST00000537182 DAXXQ9UER7 740 aaPredicted RBP8.44□□□□□ -1.06
MDM2-224ENST00000537182 ERCC6Q03468 1493 aa8.44□□□□□ -1.06
MDM2-224ENST00000537182 GOLGA8CPA6NN73 597 aa8.43□□□□□ -1.06
MDM2-224ENST00000537182 HDGFP51858 240 aaKnown RBP8.43□□□□□ -1.06
MDM2-224ENST00000537182 SWT1Q5T5J6 900 aaKnown RBP8.43□□□□□ -1.06
MDM2-224ENST00000537182 FMN1Q68DA7 1419 aa8.43□□□□□ -1.06
MDM2-224ENST00000537182 SAMD7Q7Z3H4 446 aa8.42□□□□□ -1.06
MDM2-224ENST00000537182 AQRO60306 1485 aaKnown RBP eCLIP8.42□□□□□ -1.066e-7■■■□□ 19.2
MDM2-224ENST00000537182 GRIN2BQ13224 1484 aa8.42□□□□□ -1.06
MDM2-224ENST00000537182 ARAP1Q96P48 1450 aa8.42□□□□□ -1.06
MDM2-224ENST00000537182 ARHGAP35Q9NRY4 1499 aa8.42□□□□□ -1.06
MDM2-224ENST00000537182 TARBP1Q13395 1621 aaKnown RBP8.42□□□□□ -1.06
MDM2-224ENST00000537182 FAM217BQ9NTX9 383 aaPredicted RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms