RNA–Protein interactions for RNA: ENST00000537182.5

MDM2-224, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,011 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-224ENST00000537182 AEBP2Q6ZN18 517 aaPredicted RBP19.69■□□□□ 0.74
MDM2-224ENST00000537182 CHIC1Q5VXU3 224 aa19.33■□□□□ 0.68
MDM2-224ENST00000537182 PHF23Q9BUL5 403 aaPredicted RBP17.02■□□□□ 0.32
MDM2-224ENST00000537182 SENP3Q9H4L4 574 aaPredicted RBP16.67■□□□□ 0.26
MDM2-224ENST00000537182 PLPPR3Q6T4P5 718 aa15.75■□□□□ 0.11
MDM2-224ENST00000537182 FOXD1Q16676 465 aa15.47■□□□□ 0.07
MDM2-224ENST00000537182 ADRA2BP18089 450 aa14.98□□□□□ -0.01
MDM2-224ENST00000537182 PPP6R1Q9UPN7 881 aa14.98□□□□□ -0.01
MDM2-224ENST00000537182 PIAS4Q8N2W9 510 aaPredicted RBP14.62□□□□□ -0.07
MDM2-224ENST00000537182 MSH5O43196 834 aa14.22□□□□□ -0.13
MDM2-224ENST00000537182 PPP4R3CPQ6ZMV5 832 aa13.89□□□□□ -0.19
MDM2-224ENST00000537182 POTEDQ86YR6 584 aa13.83□□□□□ -0.2
MDM2-224ENST00000537182 KCNA4P22459 653 aa13.71□□□□□ -0.21
MDM2-224ENST00000537182 SCAF1Q9H7N4 1312 aaKnown RBP13.69□□□□□ -0.22
MDM2-224ENST00000537182 MAPK8IP2Q13387 824 aaPredicted RBP13.56□□□□□ -0.24
MDM2-224ENST00000537182 NCBP3Q53F19 620 aaKnown RBP13.56□□□□□ -0.24
MDM2-224ENST00000537182 CNKSR2Q8WXI2 1034 aa13.47□□□□□ -0.25
MDM2-224ENST00000537182 NPM3O75607 178 aaKnown RBP13.37□□□□□ -0.27
MDM2-224ENST00000537182 DMRT2Q9Y5R5 561 aa13.33□□□□□ -0.28
MDM2-224ENST00000537182 RNF216Q9NWF9 866 aaPredicted RBP13.19□□□□□ -0.3
MDM2-224ENST00000537182 HOXD11P31277 338 aaPredicted RBP13.1□□□□□ -0.31
MDM2-224ENST00000537182 SLC4A1APQ9BWU0 796 aaKnown RBP13.06□□□□□ -0.32
MDM2-224ENST00000537182 DNAJC5BQ9UF47 199 aa12.94□□□□□ -0.34
MDM2-224ENST00000537182 EHMT2Q96KQ7 1210 aa12.84□□□□□ -0.35
MDM2-224ENST00000537182 DCAF8L1A6NGE4 600 aa12.76□□□□□ -0.37
MDM2-224ENST00000537182 CSRNP3Q8WYN3 585 aa12.63□□□□□ -0.39
MDM2-224ENST00000537182 ZBTB22O15209 634 aa12.61□□□□□ -0.39
MDM2-224ENST00000537182 SLC4A2P04920 1241 aa12.59□□□□□ -0.39
MDM2-224ENST00000537182 FOXD4L1Q9NU39 408 aa12.57□□□□□ -0.4
MDM2-224ENST00000537182 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.49□□□□□ -0.411e-8■■□□□ 11.6
MDM2-224ENST00000537182 MYCNP04198 464 aaPredicted RBP12.35□□□□□ -0.43
MDM2-224ENST00000537182 U3KPZ7 1027 aaPredicted RBP12.3□□□□□ -0.44
MDM2-224ENST00000537182 RNF39Q9H2S5 420 aa12.19□□□□□ -0.46
MDM2-224ENST00000537182 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.18□□□□□ -0.46
MDM2-224ENST00000537182 HNRNPUL2Q1KMD3 747 aaKnown RBP12.18□□□□□ -0.46
MDM2-224ENST00000537182 SAMD1Q6SPF0 538 aaPredicted RBP12.14□□□□□ -0.47
MDM2-224ENST00000537182 ATXN8OSP0DMR3 200 aa12.12□□□□□ -0.47
MDM2-224ENST00000537182 NISCHQ9Y2I1 1504 aa12.11□□□□□ -0.47
MDM2-224ENST00000537182 C1QBPQ07021 282 aaKnown RBP12.05□□□□□ -0.48
MDM2-224ENST00000537182 APLP2Q06481 763 aa12.02□□□□□ -0.49
MDM2-224ENST00000537182 ATF5Q9Y2D1 282 aaPredicted RBP12.02□□□□□ -0.49
MDM2-224ENST00000537182 CACNB1Q02641 598 aaPredicted RBP12.01□□□□□ -0.49
MDM2-224ENST00000537182 SPINK5Q9NQ38 1064 aaPredicted RBP11.93□□□□□ -0.5
MDM2-224ENST00000537182 CAPN15O75808 1086 aa11.88□□□□□ -0.51
MDM2-224ENST00000537182 TRHP20396 242 aaPredicted RBP11.85□□□□□ -0.51
MDM2-224ENST00000537182 ZNF219Q9P2Y4 722 aaPredicted RBP11.85□□□□□ -0.51
MDM2-224ENST00000537182 POLA2Q14181 598 aa11.68□□□□□ -0.54
MDM2-224ENST00000537182 ABCB7O75027 752 aa11.67□□□□□ -0.54
MDM2-224ENST00000537182 DSG3P32926 999 aa11.65□□□□□ -0.54
MDM2-224ENST00000537182 FBLN2P98095 1184 aa11.5□□□□□ -0.57
MDM2-224ENST00000537182 MKRN4PQ13434 485 aaPredicted RBP11.5□□□□□ -0.57
MDM2-224ENST00000537182 ZBTB12Q9Y330 459 aaPredicted RBP11.49□□□□□ -0.57
MDM2-224ENST00000537182 FKBP8Q14318 412 aa11.42□□□□□ -0.58
MDM2-224ENST00000537182 SPDYE4A6NLX3 237 aa11.29□□□□□ -0.6
MDM2-224ENST00000537182 OSCARQ8IYS5 282 aa11.28□□□□□ -0.6
MDM2-224ENST00000537182 SPDYE2BA6NHP3 402 aa11.19□□□□□ -0.62
MDM2-224ENST00000537182 SPDYE6P0CI01 402 aa11.19□□□□□ -0.62
MDM2-224ENST00000537182 SPDYE2Q495Y8 402 aa11.19□□□□□ -0.62
MDM2-224ENST00000537182 ZNF692Q9BU19 519 aaPredicted RBP11.17□□□□□ -0.62
MDM2-224ENST00000537182 PROM2Q8N271 834 aa11.12□□□□□ -0.63
MDM2-224ENST00000537182 SSUH2Q9Y2M2 353 aa11.11□□□□□ -0.63
MDM2-224ENST00000537182 RBM42Q9BTD8 480 aaKnown RBP11.09□□□□□ -0.63
MDM2-224ENST00000537182 PABPN1Q86U42 306 aaKnown RBP eCLIP11.02□□□□□ -0.65
MDM2-224ENST00000537182 AKT1S1Q96B36 256 aa10.98□□□□□ -0.65
MDM2-224ENST00000537182 FBXO3Q9UK99 471 aa10.97□□□□□ -0.65
MDM2-224ENST00000537182 REM2Q8IYK8 340 aaPredicted RBP10.88□□□□□ -0.67
MDM2-224ENST00000537182 STAG3Q9UJ98 1225 aa10.86□□□□□ -0.67
MDM2-224ENST00000537182 POTEHQ6S545 545 aa10.83□□□□□ -0.68
MDM2-224ENST00000537182 SPDYE1Q8NFV5 336 aaPredicted RBP10.83□□□□□ -0.68
MDM2-224ENST00000537182 VASPP50552 380 aaPredicted RBP10.82□□□□□ -0.68
MDM2-224ENST00000537182 CLEC11AQ9Y240 323 aa10.79□□□□□ -0.68
MDM2-224ENST00000537182 PITPNM1O00562 1244 aa10.76□□□□□ -0.69
MDM2-224ENST00000537182 PRR29P0C7W0 189 aa10.7□□□□□ -0.7
MDM2-224ENST00000537182 MIER1Q8N108 512 aa10.7□□□□□ -0.7
MDM2-224ENST00000537182 IFNLR1Q8IU57 520 aaPredicted RBP10.69□□□□□ -0.7
MDM2-224ENST00000537182 PLCD3Q8N3E9 789 aa10.69□□□□□ -0.7
MDM2-224ENST00000537182 PLEKHG5O94827 1062 aa10.63□□□□□ -0.71
MDM2-224ENST00000537182 KLHL34Q8N239 644 aa10.62□□□□□ -0.71
MDM2-224ENST00000537182 CREBZFQ9NS37 354 aa10.6□□□□□ -0.71
MDM2-224ENST00000537182 AMER1Q5JTC6 1135 aaPredicted RBP10.59□□□□□ -0.71
MDM2-224ENST00000537182 CHRDL2Q6WN34 429 aa10.59□□□□□ -0.71
MDM2-224ENST00000537182 CCDC180Q9P1Z9 1646 aa10.58□□□□□ -0.72
MDM2-224ENST00000537182 RTN4Q9NQC3 1192 aaKnown RBP10.57□□□□□ -0.72
MDM2-224ENST00000537182 ZBTB47Q9UFB7 747 aaPredicted RBP10.56□□□□□ -0.72
MDM2-224ENST00000537182 FXR2P51116 673 aaKnown RBP eCLIP10.53□□□□□ -0.72
MDM2-224ENST00000537182 SPOCK2Q92563 424 aa10.53□□□□□ -0.72
MDM2-224ENST00000537182 CHADLQ6NUI6 762 aa10.52□□□□□ -0.73
MDM2-224ENST00000537182 MNX1P50219 401 aaPredicted RBP10.5□□□□□ -0.73
MDM2-224ENST00000537182 PRKAR2AP13861 404 aaKnown RBP10.48□□□□□ -0.73
MDM2-224ENST00000537182 PIP4P2Q8N4L2 257 aa10.48□□□□□ -0.73
MDM2-224ENST00000537182 NPM1P06748 294 aaKnown RBP eCLIP10.42□□□□□ -0.74
MDM2-224ENST00000537182 FARP1Q9Y4F1 1045 aaPredicted RBP10.42□□□□□ -0.74
MDM2-224ENST00000537182 NUBP1P53384 320 aa10.41□□□□□ -0.74
MDM2-224ENST00000537182 PKD2Q13563 968 aa10.37□□□□□ -0.75
MDM2-224ENST00000537182 CIZ1Q9ULV3 898 aaPredicted RBP10.36□□□□□ -0.75
MDM2-224ENST00000537182 RASEFQ8IZ41 740 aa10.34□□□□□ -0.75
MDM2-224ENST00000537182 FAM212AQ96EL1 285 aa10.33□□□□□ -0.76
MDM2-224ENST00000537182 GSE1Q14687 1217 aa10.32□□□□□ -0.76
MDM2-224ENST00000537182 DCAF8Q5TAQ9 597 aa10.31□□□□□ -0.76
MDM2-224ENST00000537182 ECM2O94769 699 aaPredicted RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms