RNA–Protein interactions for RNA: ENST00000535297.1

TMEM258-203, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-203ENST00000535297 PLEKHG1Q9ULL1 1385 aa20.66■□□□□ 0.9
TMEM258-203ENST00000535297 SETD5Q9C0A6 1442 aa20.65■□□□□ 0.9
TMEM258-203ENST00000535297 ACIN1Q9UKV3 1341 aaKnown RBP20.65■□□□□ 0.9
TMEM258-203ENST00000535297 SLC4A1APQ9BWU0 796 aaKnown RBP20.65■□□□□ 0.9
TMEM258-203ENST00000535297 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.64■□□□□ 0.89
TMEM258-203ENST00000535297 KIF1BO60333 1816 aa20.63■□□□□ 0.89
TMEM258-203ENST00000535297 PPP1R15AO75807 674 aaPredicted RBP20.63■□□□□ 0.89
TMEM258-203ENST00000535297 LRRC7Q96NW7 1537 aa20.62■□□□□ 0.89
TMEM258-203ENST00000535297 DIP2AQ14689 1571 aa20.6■□□□□ 0.89
TMEM258-203ENST00000535297 NWD1Q149M9 1564 aa20.6■□□□□ 0.89
TMEM258-203ENST00000535297 UBAP1LF5GYI3 381 aa20.58■□□□□ 0.89
TMEM258-203ENST00000535297 SLC26A8Q96RN1 970 aa20.58■□□□□ 0.89
TMEM258-203ENST00000535297 BCANQ96GW7 911 aa20.57■□□□□ 0.88
TMEM258-203ENST00000535297 RAB3GAP2Q9H2M9 1393 aa20.57■□□□□ 0.88
TMEM258-203ENST00000535297 NKTRP30414 1462 aaKnown RBP20.56■□□□□ 0.88
TMEM258-203ENST00000535297 NEXMIFQ5QGS0 1516 aa20.56■□□□□ 0.88
TMEM258-203ENST00000535297 ADAMTS13Q76LX8 1427 aa20.55■□□□□ 0.88
TMEM258-203ENST00000535297 KCNA6P17658 529 aa20.55■□□□□ 0.88
TMEM258-203ENST00000535297 MPHOSPH9Q99550 1183 aa20.55■□□□□ 0.88
TMEM258-203ENST00000535297 CHD2O14647 1828 aaKnown RBP20.55■□□□□ 0.88
TMEM258-203ENST00000535297 XIRP1Q702N8 1843 aaKnown RBP20.55■□□□□ 0.88
TMEM258-203ENST00000535297 ZNF326Q5BKZ1 582 aaKnown RBP20.54■□□□□ 0.88
TMEM258-203ENST00000535297 SETBP1Q9Y6X0 1596 aa20.54■□□□□ 0.88
TMEM258-203ENST00000535297 NUTM2DQ5VT03 806 aaPredicted RBP20.53■□□□□ 0.88
TMEM258-203ENST00000535297 TBX22Q9Y458 520 aa20.53■□□□□ 0.88
TMEM258-203ENST00000535297 NRXN3Q9Y4C0 1643 aa20.53■□□□□ 0.88
TMEM258-203ENST00000535297 PIK3R4Q99570 1358 aa20.51■□□□□ 0.87
TMEM258-203ENST00000535297 TOM1O60784 492 aa20.51■□□□□ 0.87
TMEM258-203ENST00000535297 FOXD1Q16676 465 aa20.51■□□□□ 0.87
TMEM258-203ENST00000535297 ALKQ9UM73 1620 aa20.51■□□□□ 0.87
TMEM258-203ENST00000535297 CCDC144AA2RUR9 1427 aa20.51■□□□□ 0.87
TMEM258-203ENST00000535297 SENP3Q9H4L4 574 aaPredicted RBP20.5■□□□□ 0.87
TMEM258-203ENST00000535297 TMEM94Q12767 1356 aa20.48■□□□□ 0.87
TMEM258-203ENST00000535297 PPLO60437 1756 aa20.47■□□□□ 0.87
TMEM258-203ENST00000535297 HRCP23327 699 aa20.46■□□□□ 0.87
TMEM258-203ENST00000535297 RPGRIP1LQ68CZ1 1315 aa20.46■□□□□ 0.87
TMEM258-203ENST00000535297 PROSER2Q86WR7 435 aaPredicted RBP20.45■□□□□ 0.86
TMEM258-203ENST00000535297 SPATA31E1Q6ZUB1 1445 aa20.44■□□□□ 0.86
TMEM258-203ENST00000535297 XRN1Q8IZH2 1706 aaKnown RBP20.43■□□□□ 0.86
TMEM258-203ENST00000535297 VGFO15240 615 aaPredicted RBP20.42■□□□□ 0.86
TMEM258-203ENST00000535297 PIP4K2BP78356 416 aa20.42■□□□□ 0.86
TMEM258-203ENST00000535297 SCAF1Q9H7N4 1312 aaKnown RBP20.42■□□□□ 0.86
TMEM258-203ENST00000535297 IFT172Q9UG01 1749 aa20.41■□□□□ 0.86
TMEM258-203ENST00000535297 PTPRUQ92729 1446 aa20.41■□□□□ 0.86
TMEM258-203ENST00000535297 NCOA3Q9Y6Q9 1424 aa20.41■□□□□ 0.86
TMEM258-203ENST00000535297 SETD1AO15047 1707 aaKnown RBP20.4■□□□□ 0.86
TMEM258-203ENST00000535297 MSH6P52701 1360 aa20.38■□□□□ 0.85
TMEM258-203ENST00000535297 METP08581 1390 aa20.37■□□□□ 0.85
TMEM258-203ENST00000535297 ANKRD30BQ9BXX2 1392 aa20.37■□□□□ 0.85
TMEM258-203ENST00000535297 AMOTL2Q9Y2J4 779 aa20.37■□□□□ 0.85
TMEM258-203ENST00000535297 RBM33Q96EV2 1170 aaKnown RBP20.36■□□□□ 0.85
TMEM258-203ENST00000535297 HSPA1LP34931 641 aa20.33■□□□□ 0.85
TMEM258-203ENST00000535297 RGL3Q3MIN7 710 aa20.33■□□□□ 0.85
TMEM258-203ENST00000535297 FAM135BQ49AJ0 1406 aa20.32■□□□□ 0.84
TMEM258-203ENST00000535297 PRAG1Q86YV5 1406 aa20.32■□□□□ 0.84
TMEM258-203ENST00000535297 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.31■□□□□ 0.84
TMEM258-203ENST00000535297 ADGRF5Q8IZF2 1346 aa20.3■□□□□ 0.84
TMEM258-203ENST00000535297 PTCH1Q13635 1447 aa20.3■□□□□ 0.84
TMEM258-203ENST00000535297 MYOM2P54296 1465 aa20.3■□□□□ 0.84
TMEM258-203ENST00000535297 ROBO1Q9Y6N7 1651 aa20.29■□□□□ 0.84
TMEM258-203ENST00000535297 PIK3C2GO75747 1445 aa20.29■□□□□ 0.84
TMEM258-203ENST00000535297 C14orf37Q86TY3 774 aa20.29■□□□□ 0.84
TMEM258-203ENST00000535297 DCCP43146 1447 aa20.28■□□□□ 0.84
TMEM258-203ENST00000535297 NRXN1Q9ULB1 1477 aa20.27■□□□□ 0.84
TMEM258-203ENST00000535297 C19orf44Q9H6X5 657 aa20.27■□□□□ 0.84
TMEM258-203ENST00000535297 LAMC1P11047 1609 aa20.26■□□□□ 0.83
TMEM258-203ENST00000535297 CADPS2Q86UW7 1296 aa20.25■□□□□ 0.83
TMEM258-203ENST00000535297 ADGRL3Q9HAR2 1447 aa20.25■□□□□ 0.83
TMEM258-203ENST00000535297 NALCNQ8IZF0 1738 aa20.24■□□□□ 0.83
TMEM258-203ENST00000535297 ASXL1Q8IXJ9 1541 aa20.24■□□□□ 0.83
TMEM258-203ENST00000535297 SLAIN2Q9P270 581 aa20.24■□□□□ 0.83
TMEM258-203ENST00000535297 ATF3P18847 181 aa20.23■□□□□ 0.83
TMEM258-203ENST00000535297 KNDC1Q76NI1 1749 aa20.22■□□□□ 0.83
TMEM258-203ENST00000535297 ROBO2Q9HCK4 1378 aa20.21■□□□□ 0.83
TMEM258-203ENST00000535297 TECPR2O15040 1411 aa20.2■□□□□ 0.82
TMEM258-203ENST00000535297 LRPPRCP42704 1394 aaKnown RBP20.2■□□□□ 0.82
TMEM258-203ENST00000535297 PHLPP1O60346 1717 aa20.18■□□□□ 0.82
TMEM258-203ENST00000535297 DISP3Q9P2K9 1392 aa20.18■□□□□ 0.82
TMEM258-203ENST00000535297 MST1RQ04912 1400 aa20.18■□□□□ 0.82
TMEM258-203ENST00000535297 MED1Q15648 1581 aaPredicted RBP20.17■□□□□ 0.82
TMEM258-203ENST00000535297 C14orf93Q9H972 538 aaKnown RBP20.17■□□□□ 0.82
TMEM258-203ENST00000535297 STAC3Q96MF2 364 aa20.16■□□□□ 0.82
TMEM258-203ENST00000535297 ABCC11Q96J66 1382 aa20.16■□□□□ 0.82
TMEM258-203ENST00000535297 YTHDC2Q9H6S0 1430 aaKnown RBP20.16■□□□□ 0.82
TMEM258-203ENST00000535297 AHDC1Q5TGY3 1603 aaPredicted RBP20.16■□□□□ 0.82
TMEM258-203ENST00000535297 COL16A1Q07092 1604 aaPredicted RBP20.13■□□□□ 0.81
TMEM258-203ENST00000535297 CDC42BPGQ6DT37 1551 aa20.13■□□□□ 0.81
TMEM258-203ENST00000535297 DHX57Q6P158 1386 aaKnown RBP20.13■□□□□ 0.81
TMEM258-203ENST00000535297 TMEM132EQ6IEE7 984 aa20.13■□□□□ 0.81
TMEM258-203ENST00000535297 CFAP70Q5T0N1 1121 aa20.12■□□□□ 0.81
TMEM258-203ENST00000535297 DCAF11Q8TEB1 546 aa20.11■□□□□ 0.81
TMEM258-203ENST00000535297 STK26Q9P289 416 aa20.11■□□□□ 0.81
TMEM258-203ENST00000535297 ADGRB1O14514 1584 aa20.11■□□□□ 0.81
TMEM258-203ENST00000535297 NHSL1Q5SYE7 1610 aa20.1■□□□□ 0.81
TMEM258-203ENST00000535297 TRIM26Q12899 539 aaPredicted RBP20.1■□□□□ 0.81
TMEM258-203ENST00000535297 BRINP3Q76B58 766 aa20.1■□□□□ 0.81
TMEM258-203ENST00000535297 DLC1Q96QB1 1528 aa20.09■□□□□ 0.81
TMEM258-203ENST00000535297 C1orf167Q5SNV9 1468 aa20.09■□□□□ 0.81
TMEM258-203ENST00000535297 SIRT1Q96EB6 747 aa20.08■□□□□ 0.81
TMEM258-203ENST00000535297 KDM2AQ9Y2K7 1162 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms