RNA–Protein interactions for RNA: ENST00000535147.5

DDB1-204, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,789 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-204ENST00000535147 ZNF521Q96K83 1311 aa13.43□□□□□ -0.26
DDB1-204ENST00000535147 PLXNC1O60486 1568 aa13.43□□□□□ -0.26
DDB1-204ENST00000535147 SPINK5Q9NQ38 1064 aaPredicted RBP13.42□□□□□ -0.26
DDB1-204ENST00000535147 PPM1GO15355 546 aaPredicted RBP13.42□□□□□ -0.26
DDB1-204ENST00000535147 CENPQQ7L2Z9 268 aaPredicted RBP13.42□□□□□ -0.26
DDB1-204ENST00000535147 RGS3P49796 1198 aa13.41□□□□□ -0.26
DDB1-204ENST00000535147 DDRGK1Q96HY6 314 aa13.41□□□□□ -0.26
DDB1-204ENST00000535147 USP35Q9P2H5 1018 aa13.41□□□□□ -0.26
DDB1-204ENST00000535147 RNF17Q9BXT8 1623 aaKnown RBP13.41□□□□□ -0.26
DDB1-204ENST00000535147 APAF1O14727 1248 aa13.4□□□□□ -0.26
DDB1-204ENST00000535147 SLFN5Q08AF3 891 aa13.4□□□□□ -0.26
DDB1-204ENST00000535147 TRAPPC8Q9Y2L5 1435 aa13.4□□□□□ -0.26
DDB1-204ENST00000535147 KLHL34Q8N239 644 aa13.39□□□□□ -0.27
DDB1-204ENST00000535147 ERCC6L2Q5T890 1561 aa13.39□□□□□ -0.27
DDB1-204ENST00000535147 C8orf34Q49A92 452 aa13.39□□□□□ -0.27
DDB1-204ENST00000535147 EFCAB2Q5VUJ9 269 aa13.39□□□□□ -0.27
DDB1-204ENST00000535147 AFAP1Q8N556 730 aa13.39□□□□□ -0.27
DDB1-204ENST00000535147 BCAR3O75815 825 aa13.38□□□□□ -0.27
DDB1-204ENST00000535147 MADDQ8WXG6 1647 aa13.38□□□□□ -0.27
DDB1-204ENST00000535147 FAM161AQ3B820 660 aa13.37□□□□□ -0.27
DDB1-204ENST00000535147 CDCA8Q53HL2 280 aa13.37□□□□□ -0.27
DDB1-204ENST00000535147 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.37□□□□□ -0.27
DDB1-204ENST00000535147 DMRT2Q9Y5R5 561 aa13.37□□□□□ -0.27
DDB1-204ENST00000535147 SCAF11Q99590 1463 aaKnown RBP13.37□□□□□ -0.27
DDB1-204ENST00000535147 ASXL1Q8IXJ9 1541 aa13.37□□□□□ -0.27
DDB1-204ENST00000535147 EIF5BO60841 1220 aaKnown RBP13.37□□□□□ -0.27
DDB1-204ENST00000535147 NFKBIBQ15653 356 aa13.36□□□□□ -0.27
DDB1-204ENST00000535147 PLCH2O75038 1416 aa13.36□□□□□ -0.27
DDB1-204ENST00000535147 IQGAP1P46940 1657 aa13.36□□□□□ -0.27
DDB1-204ENST00000535147 SPAG9O60271 1321 aaKnown RBP13.36□□□□□ -0.27
DDB1-204ENST00000535147 ABCC2Q92887 1545 aa13.35□□□□□ -0.27
DDB1-204ENST00000535147 PIK3C2GO75747 1445 aa13.35□□□□□ -0.27
DDB1-204ENST00000535147 TRMT2AQ8IZ69 625 aaKnown RBP13.35□□□□□ -0.27
DDB1-204ENST00000535147 CFAP70Q5T0N1 1121 aa13.34□□□□□ -0.27
DDB1-204ENST00000535147 SYNMO15061 1565 aa13.34□□□□□ -0.27
DDB1-204ENST00000535147 CHD1O14646 1710 aa13.33□□□□□ -0.28
DDB1-204ENST00000535147 CARD14Q9BXL6 1004 aa13.33□□□□□ -0.28
DDB1-204ENST00000535147 CLTCL1P53675 1640 aa13.32□□□□□ -0.28
DDB1-204ENST00000535147 NKTRP30414 1462 aaKnown RBP13.32□□□□□ -0.28
DDB1-204ENST00000535147 IGHDP01880 384 aa13.32□□□□□ -0.28
DDB1-204ENST00000535147 MYOM1P52179 1685 aa13.31□□□□□ -0.28
DDB1-204ENST00000535147 TRPM2O94759 1503 aa13.31□□□□□ -0.28
DDB1-204ENST00000535147 ABCC1P33527 1531 aa13.31□□□□□ -0.28
DDB1-204ENST00000535147 SCAPERQ9BY12 1400 aa13.31□□□□□ -0.28
DDB1-204ENST00000535147 SPHKAPQ2M3C7 1700 aa13.31□□□□□ -0.28
DDB1-204ENST00000535147 ADGRF5Q8IZF2 1346 aa13.3□□□□□ -0.28
DDB1-204ENST00000535147 CLASP1Q7Z460 1538 aa13.3□□□□□ -0.28
DDB1-204ENST00000535147 GSE1Q14687 1217 aa13.3□□□□□ -0.28
DDB1-204ENST00000535147 NPC1L1Q9UHC9 1359 aa13.3□□□□□ -0.28
DDB1-204ENST00000535147 PTPRTO14522 1441 aa13.3□□□□□ -0.28
DDB1-204ENST00000535147 EIF3AQ14152 1382 aaKnown RBP13.3□□□□□ -0.28
DDB1-204ENST00000535147 E9PSI1 815 aa13.3□□□□□ -0.28
DDB1-204ENST00000535147 KIF3BO15066 747 aa13.3□□□□□ -0.28
DDB1-204ENST00000535147 NEUROD2Q15784 382 aa13.3□□□□□ -0.28
DDB1-204ENST00000535147 TNNT2P45379 298 aaPredicted RBP13.29□□□□□ -0.28
DDB1-204ENST00000535147 BRPF3Q9ULD4 1205 aa13.29□□□□□ -0.28
DDB1-204ENST00000535147 SHROOM2Q13796 1616 aa13.29□□□□□ -0.28
DDB1-204ENST00000535147 PANK1Q8TE04 598 aa13.29□□□□□ -0.28
DDB1-204ENST00000535147 TAOK2Q9UL54 1235 aa13.29□□□□□ -0.28
DDB1-204ENST00000535147 AEBP2Q6ZN18 517 aaPredicted RBP13.28□□□□□ -0.28
DDB1-204ENST00000535147 COG6Q9Y2V7 657 aa13.28□□□□□ -0.28
DDB1-204ENST00000535147 FRAT1Q92837 279 aaPredicted RBP13.28□□□□□ -0.28
DDB1-204ENST00000535147 ANO8Q9HCE9 1232 aaPredicted RBP13.28□□□□□ -0.28
DDB1-204ENST00000535147 UGGT1Q9NYU2 1555 aa13.28□□□□□ -0.28
DDB1-204ENST00000535147 CEP152O94986 1710 aa13.28□□□□□ -0.28
DDB1-204ENST00000535147 FRAT2O75474 233 aaPredicted RBP13.27□□□□□ -0.28
DDB1-204ENST00000535147 STAC3Q96MF2 364 aa13.27□□□□□ -0.28
DDB1-204ENST00000535147 RRP7AQ9Y3A4 280 aaKnown RBP13.27□□□□□ -0.28
DDB1-204ENST00000535147 ERVK-7P63135 1459 aa13.27□□□□□ -0.28
DDB1-204ENST00000535147 CANXP27824 592 aaKnown RBP13.27□□□□□ -0.29
DDB1-204ENST00000535147 WWC1Q8IX03 1113 aa13.26□□□□□ -0.29
DDB1-204ENST00000535147 ZCCHC11Q5TAX3 1644 aaKnown RBP13.26□□□□□ -0.29
DDB1-204ENST00000535147 ZFYVE16Q7Z3T8 1539 aa13.26□□□□□ -0.29
DDB1-204ENST00000535147 CENPJQ9HC77 1338 aaPredicted RBP13.26□□□□□ -0.29
DDB1-204ENST00000535147 KDM5AP29375 1690 aaKnown RBP13.26□□□□□ -0.29
DDB1-204ENST00000535147 SEC24BO95487 1268 aa13.26□□□□□ -0.29
DDB1-204ENST00000535147 KANK1Q14678 1352 aa13.25□□□□□ -0.29
DDB1-204ENST00000535147 CLUAP1Q96AJ1 413 aa13.24□□□□□ -0.29
DDB1-204ENST00000535147 RTEL1-TNFRSF6BF6WH68 1400 aa13.24□□□□□ -0.29
DDB1-204ENST00000535147 USP19O94966 1318 aa13.24□□□□□ -0.29
DDB1-204ENST00000535147 TNNQ9UQP3 1299 aa13.24□□□□□ -0.29
DDB1-204ENST00000535147 CGNL1Q0VF96 1302 aa13.23□□□□□ -0.29
DDB1-204ENST00000535147 PDE3AQ14432 1141 aa13.23□□□□□ -0.29
DDB1-204ENST00000535147 CHGAP10645 457 aaKnown RBP13.23□□□□□ -0.29
DDB1-204ENST00000535147 BCL2L13Q9BXK5 485 aa13.23□□□□□ -0.29
DDB1-204ENST00000535147 SLC12A5Q9H2X9 1139 aa13.22□□□□□ -0.29
DDB1-204ENST00000535147 TRAK1Q9UPV9 953 aa13.22□□□□□ -0.29
DDB1-204ENST00000535147 TET3O43151 1660 aa13.22□□□□□ -0.29
DDB1-204ENST00000535147 MORC1Q86VD1 984 aa13.21□□□□□ -0.29
DDB1-204ENST00000535147 ABCA6Q8N139 1617 aa13.21□□□□□ -0.29
DDB1-204ENST00000535147 DEPDC5O75140 1603 aa13.21□□□□□ -0.3
DDB1-204ENST00000535147 RLBP1P12271 317 aa13.2□□□□□ -0.3
DDB1-204ENST00000535147 TCP11L2Q8N4U5 519 aa13.2□□□□□ -0.3
DDB1-204ENST00000535147 POLR3AO14802 1390 aaPredicted RBP13.2□□□□□ -0.3
DDB1-204ENST00000535147 MAP3K4Q9Y6R4 1608 aa13.2□□□□□ -0.3
DDB1-204ENST00000535147 NSD3Q9BZ95 1437 aa13.2□□□□□ -0.3
DDB1-204ENST00000535147 ATP7AQ04656 1500 aa13.2□□□□□ -0.3
DDB1-204ENST00000535147 RARSP54136 660 aaKnown RBP13.19□□□□□ -0.3
DDB1-204ENST00000535147 PCDHB15Q9Y5E8 787 aa13.19□□□□□ -0.3
DDB1-204ENST00000535147 TMEM132EQ6IEE7 984 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms