RNA–Protein interactions for RNA: ENST00000534947.5

COPS7A-204, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-204ENST00000534947 KIF3BO15066 747 aa25.15■■□□□ 1.62
COPS7A-204ENST00000534947 B4GALNT3Q6L9W6 998 aa25.15■■□□□ 1.62
COPS7A-204ENST00000534947 IFT172Q9UG01 1749 aa25.15■■□□□ 1.62
COPS7A-204ENST00000534947 NPC1L1Q9UHC9 1359 aa25.12■■□□□ 1.61
COPS7A-204ENST00000534947 PPRC1Q5VV67 1664 aaKnown RBP25.11■■□□□ 1.61
COPS7A-204ENST00000534947 KDM5AP29375 1690 aaKnown RBP25.09■■□□□ 1.61
COPS7A-204ENST00000534947 MYOM1P52179 1685 aa25.09■■□□□ 1.61
COPS7A-204ENST00000534947 CC2D1BQ5T0F9 858 aaKnown RBP25.09■■□□□ 1.61
COPS7A-204ENST00000534947 NRXN1Q9ULB1 1477 aa25.08■■□□□ 1.61
COPS7A-204ENST00000534947 ABCA6Q8N139 1617 aa25.08■■□□□ 1.61
COPS7A-204ENST00000534947 MLH3Q9UHC1 1453 aa25.07■■□□□ 1.6
COPS7A-204ENST00000534947 ASXL1Q8IXJ9 1541 aa25.07■■□□□ 1.6
COPS7A-204ENST00000534947 KNSTRNQ9Y448 316 aa25.07■■□□□ 1.6
COPS7A-204ENST00000534947 MYO3AQ8NEV4 1616 aa25.06■■□□□ 1.6
COPS7A-204ENST00000534947 POGZQ7Z3K3 1410 aa25.05■■□□□ 1.6
COPS7A-204ENST00000534947 MYT1LQ9UL68 1186 aa25.05■■□□□ 1.6
COPS7A-204ENST00000534947 NPM1P06748 294 aaKnown RBP eCLIP25.04■■□□□ 1.6
COPS7A-204ENST00000534947 CCDC136Q96JN2 1154 aa25.04■■□□□ 1.6
COPS7A-204ENST00000534947 ADGRB3O60242 1522 aa25.04■■□□□ 1.6
COPS7A-204ENST00000534947 RRP1P56182 461 aaKnown RBP25.03■■□□□ 1.6
COPS7A-204ENST00000534947 RCAN3Q9UKA8 241 aa25.03■■□□□ 1.6
COPS7A-204ENST00000534947 HECW2Q9P2P5 1572 aa25.03■■□□□ 1.6
COPS7A-204ENST00000534947 SETBP1Q9Y6X0 1596 aa25.03■■□□□ 1.6
COPS7A-204ENST00000534947 PIK3C2GO75747 1445 aa25.02■■□□□ 1.6
COPS7A-204ENST00000534947 MROH2AA6NES4 1674 aa25.02■■□□□ 1.6
COPS7A-204ENST00000534947 AMER1Q5JTC6 1135 aaPredicted RBP25.02■■□□□ 1.6
COPS7A-204ENST00000534947 SBNO2Q9Y2G9 1366 aa25.02■■□□□ 1.6
COPS7A-204ENST00000534947 UGGT1Q9NYU2 1555 aa25.01■■□□□ 1.59
COPS7A-204ENST00000534947 CD109Q6YHK3 1445 aa25■■□□□ 1.59
COPS7A-204ENST00000534947 FRMPD1Q5SYB0 1578 aa24.99■■□□□ 1.59
COPS7A-204ENST00000534947 OSCARQ8IYS5 282 aa24.98■■□□□ 1.59
COPS7A-204ENST00000534947 PPP2R1AP30153 589 aa24.97■■□□□ 1.59
COPS7A-204ENST00000534947 ERVK-7P63135 1459 aa24.96■■□□□ 1.59
COPS7A-204ENST00000534947 NEO1Q92859 1461 aa24.95■■□□□ 1.58
COPS7A-204ENST00000534947 PPLO60437 1756 aa24.95■■□□□ 1.58
COPS7A-204ENST00000534947 ADGRF5Q8IZF2 1346 aa24.93■■□□□ 1.58
COPS7A-204ENST00000534947 CFAP70Q5T0N1 1121 aa24.92■■□□□ 1.58
COPS7A-204ENST00000534947 NPATQ14207 1427 aa24.92■■□□□ 1.58
COPS7A-204ENST00000534947 SENP3-EIF4A1A0A087X0R7 540 aa24.91■■□□□ 1.58
COPS7A-204ENST00000534947 RPGRIP1LQ68CZ1 1315 aa24.9■■□□□ 1.58
COPS7A-204ENST00000534947 ABCC3O15438 1527 aa24.89■■□□□ 1.58
COPS7A-204ENST00000534947 WDR43Q15061 677 aaKnown RBP eCLIP24.89■■□□□ 1.57
COPS7A-204ENST00000534947 ADAMTS8Q9UP79 889 aa24.89■■□□□ 1.57
COPS7A-204ENST00000534947 MSH5O43196 834 aa24.88■■□□□ 1.57
COPS7A-204ENST00000534947 ZC3H13Q5T200 1668 aaKnown RBP24.87■■□□□ 1.57
COPS7A-204ENST00000534947 NOS1P29475 1434 aa24.87■■□□□ 1.57
COPS7A-204ENST00000534947 CDCA7LQ96GN5 454 aa24.86■■□□□ 1.57
COPS7A-204ENST00000534947 SALL2Q9Y467 1007 aaPredicted RBP24.86■■□□□ 1.57
COPS7A-204ENST00000534947 CAMSAP1Q5T5Y3 1602 aa24.86■■□□□ 1.57
COPS7A-204ENST00000534947 PIK3C2BO00750 1634 aa24.84■■□□□ 1.57
COPS7A-204ENST00000534947 ADGRB1O14514 1584 aa24.83■■□□□ 1.57
COPS7A-204ENST00000534947 ZNF521Q96K83 1311 aa24.82■■□□□ 1.56
COPS7A-204ENST00000534947 EXOC6Q8TAG9 804 aa24.82■■□□□ 1.56
COPS7A-204ENST00000534947 C14orf93Q9H972 538 aaKnown RBP24.82■■□□□ 1.56
COPS7A-204ENST00000534947 CENPJQ9HC77 1338 aaPredicted RBP24.82■■□□□ 1.56
COPS7A-204ENST00000534947 NGEFQ8N5V2 710 aa24.81■■□□□ 1.56
COPS7A-204ENST00000534947 QRICH2Q9H0J4 1663 aa24.81■■□□□ 1.56
COPS7A-204ENST00000534947 DIP2CQ9Y2E4 1556 aa24.8■■□□□ 1.56
COPS7A-204ENST00000534947 ARHGAP31Q2M1Z3 1444 aa24.8■■□□□ 1.56
COPS7A-204ENST00000534947 USP32Q8NFA0 1604 aa24.78■■□□□ 1.56
COPS7A-204ENST00000534947 PLEKHH1Q9ULM0 1364 aa24.78■■□□□ 1.56
COPS7A-204ENST00000534947 RICTORQ6R327 1708 aa24.77■■□□□ 1.56
COPS7A-204ENST00000534947 SIGLEC1Q9BZZ2 1709 aa24.76■■□□□ 1.55
COPS7A-204ENST00000534947 PUS7Q96PZ0 661 aaKnown RBP24.76■■□□□ 1.55
COPS7A-204ENST00000534947 CFAP65Q6ZU64 1925 aaKnown RBP24.75■■□□□ 1.55
COPS7A-204ENST00000534947 GGT6Q6P531 493 aa24.75■■□□□ 1.55
COPS7A-204ENST00000534947 GOLGA2Q08379 1002 aa24.74■■□□□ 1.55
COPS7A-204ENST00000534947 TCERG1O14776 1098 aaKnown RBP24.74■■□□□ 1.55
COPS7A-204ENST00000534947 DUSP27Q5VZP5 1158 aa24.74■■□□□ 1.55
COPS7A-204ENST00000534947 ERICH6Q7L0X2 663 aa24.74■■□□□ 1.55
COPS7A-204ENST00000534947 CARD14Q9BXL6 1004 aa24.73■■□□□ 1.55
COPS7A-204ENST00000534947 POLR3AO14802 1390 aaPredicted RBP24.73■■□□□ 1.55
COPS7A-204ENST00000534947 NEXMIFQ5QGS0 1516 aa24.72■■□□□ 1.55
COPS7A-204ENST00000534947 CHGAP10645 457 aaKnown RBP24.71■■□□□ 1.55
COPS7A-204ENST00000534947 GLI2P10070 1586 aa24.71■■□□□ 1.55
COPS7A-204ENST00000534947 ZFYVE9O95405 1425 aa24.71■■□□□ 1.55
COPS7A-204ENST00000534947 MS4A1P11836 297 aa24.69■■□□□ 1.54
COPS7A-204ENST00000534947 TRMT2AQ8IZ69 625 aaKnown RBP24.69■■□□□ 1.54
COPS7A-204ENST00000534947 ARHGEF28Q8N1W1 1705 aaKnown RBP24.68■■□□□ 1.54
COPS7A-204ENST00000534947 VGFO15240 615 aaPredicted RBP24.68■■□□□ 1.54
COPS7A-204ENST00000534947 SLFN5Q08AF3 891 aa24.68■■□□□ 1.54
COPS7A-204ENST00000534947 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.67■■□□□ 1.54
COPS7A-204ENST00000534947 NSD3Q9BZ95 1437 aa24.65■■□□□ 1.54
COPS7A-204ENST00000534947 TRAK1Q9UPV9 953 aa24.65■■□□□ 1.54
COPS7A-204ENST00000534947 ANP32AP39687 249 aaKnown RBP24.64■■□□□ 1.54
COPS7A-204ENST00000534947 CRBNQ96SW2 442 aa24.64■■□□□ 1.53
COPS7A-204ENST00000534947 NKTRP30414 1462 aaKnown RBP24.63■■□□□ 1.53
COPS7A-204ENST00000534947 RAPGEF3O95398 923 aa24.63■■□□□ 1.53
COPS7A-204ENST00000534947 SLC52A1Q9NWF4 448 aa24.63■■□□□ 1.53
COPS7A-204ENST00000534947 SHPRHQ149N8 1683 aa24.62■■□□□ 1.53
COPS7A-204ENST00000534947 PLIN1O60240 522 aa24.62■■□□□ 1.53
COPS7A-204ENST00000534947 NSD2O96028 1365 aa24.61■■□□□ 1.53
COPS7A-204ENST00000534947 E9PSI1 815 aa24.61■■□□□ 1.53
COPS7A-204ENST00000534947 EVC2Q86UK5 1308 aa24.6■■□□□ 1.53
COPS7A-204ENST00000534947 PREX1Q8TCU6 1659 aa24.6■■□□□ 1.53
COPS7A-204ENST00000534947 NOP58Q9Y2X3 529 aaKnown RBP24.59■■□□□ 1.53
COPS7A-204ENST00000534947 TULP4Q9NRJ4 1543 aa24.59■■□□□ 1.53
COPS7A-204ENST00000534947 APAF1O14727 1248 aa24.59■■□□□ 1.53
COPS7A-204ENST00000534947 NINLQ9Y2I6 1382 aa24.58■■□□□ 1.53
COPS7A-204ENST00000534947 MORC1Q86VD1 984 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms