RNA–Protein interactions for RNA: ENST00000534579.5

CTNND1-237, Transcript of catenin delta 1, humanhuman

TSL 5 BASIC

Gene CTNND1, Length 6,024 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-237ENST00000534579 PRXQ9BXM0 1461 aa10.96□□□□□ -0.66
CTNND1-237ENST00000534579 AMOTL1Q8IY63 956 aa10.96□□□□□ -0.66
CTNND1-237ENST00000534579 CENPJQ9HC77 1338 aaPredicted RBP10.95□□□□□ -0.66
CTNND1-237ENST00000534579 TRIM6-TRIM34B2RNG4 842 aa10.95□□□□□ -0.66
CTNND1-237ENST00000534579 TPD52L1Q16890 204 aaPredicted RBP10.95□□□□□ -0.66
CTNND1-237ENST00000534579 C1orf141Q5JVX7 400 aa10.95□□□□□ -0.66
CTNND1-237ENST00000534579 HECW1Q76N89 1606 aa10.95□□□□□ -0.66
CTNND1-237ENST00000534579 EHBP1L1Q8N3D4 1523 aa10.94□□□□□ -0.66
CTNND1-237ENST00000534579 CLUAP1Q96AJ1 413 aa10.94□□□□□ -0.66
CTNND1-237ENST00000534579 RWDD1Q9H446 243 aaPredicted RBP10.94□□□□□ -0.66
CTNND1-237ENST00000534579 ATF3P18847 181 aa10.93□□□□□ -0.66
CTNND1-237ENST00000534579 ARID3AQ99856 593 aa10.93□□□□□ -0.66
CTNND1-237ENST00000534579 SCAPERQ9BY12 1400 aa10.93□□□□□ -0.66
CTNND1-237ENST00000534579 PATL2C9JE40 543 aaKnown RBP10.93□□□□□ -0.66
CTNND1-237ENST00000534579 SAMD1Q6SPF0 538 aaPredicted RBP10.93□□□□□ -0.66
CTNND1-237ENST00000534579 TROQ12816 1431 aaPredicted RBP10.93□□□□□ -0.66
CTNND1-237ENST00000534579 TPM2P07951 284 aa10.93□□□□□ -0.66
CTNND1-237ENST00000534579 TMEM132EQ6IEE7 984 aa10.93□□□□□ -0.66
CTNND1-237ENST00000534579 USP35Q9P2H5 1018 aa10.92□□□□□ -0.66
CTNND1-237ENST00000534579 STAC3Q96MF2 364 aa10.92□□□□□ -0.66
CTNND1-237ENST00000534579 TNNT3P45378 269 aaPredicted RBP10.92□□□□□ -0.66
CTNND1-237ENST00000534579 PLEKHH2Q8IVE3 1493 aa10.92□□□□□ -0.66
CTNND1-237ENST00000534579 C9orf84Q5VXU9 1444 aa10.92□□□□□ -0.66
CTNND1-237ENST00000534579 HDAC5Q9UQL6 1122 aa10.92□□□□□ -0.66
CTNND1-237ENST00000534579 AKAP17AQ02040 695 aaKnown RBP10.91□□□□□ -0.66
CTNND1-237ENST00000534579 ABCA10Q8WWZ4 1543 aa10.91□□□□□ -0.66
CTNND1-237ENST00000534579 KIAA0586Q9BVV6 1533 aa10.91□□□□□ -0.66
CTNND1-237ENST00000534579 PDE3BQ13370 1112 aa10.91□□□□□ -0.66
CTNND1-237ENST00000534579 ELL2O00472 640 aaPredicted RBP10.91□□□□□ -0.66
CTNND1-237ENST00000534579 RAPGEF3O95398 923 aa10.91□□□□□ -0.66
CTNND1-237ENST00000534579 TEFQ10587 303 aa10.9□□□□□ -0.66
CTNND1-237ENST00000534579 NOL8Q76FK4 1167 aaKnown RBP10.9□□□□□ -0.66
CTNND1-237ENST00000534579 CCDC43Q96MW1 224 aaKnown RBP10.9□□□□□ -0.66
CTNND1-237ENST00000534579 DHX16O60231 1041 aaKnown RBP10.9□□□□□ -0.66
CTNND1-237ENST00000534579 HMMRO75330 724 aa10.9□□□□□ -0.66
CTNND1-237ENST00000534579 TXNDC2Q86VQ3 553 aa10.9□□□□□ -0.66
CTNND1-237ENST00000534579 SYAP1Q96A49 352 aaPredicted RBP10.9□□□□□ -0.66
CTNND1-237ENST00000534579 PMFBP1Q8TBY8 1022 aa10.9□□□□□ -0.66
CTNND1-237ENST00000534579 PRKRIP1Q9H875 184 aaPredicted RBP10.9□□□□□ -0.66
CTNND1-237ENST00000534579 DIAPH1O60610 1272 aaKnown RBP10.9□□□□□ -0.67
CTNND1-237ENST00000534579 RRBP1Q9P2E9 1410 aaKnown RBP10.89□□□□□ -0.67
CTNND1-237ENST00000534579 TSR1Q2NL82 804 aaKnown RBP10.89□□□□□ -0.67
CTNND1-237ENST00000534579 CABP2Q9NPB3 220 aa10.89□□□□□ -0.67
CTNND1-237ENST00000534579 IQGAP2Q13576 1575 aa10.89□□□□□ -0.67
CTNND1-237ENST00000534579 SF3A1Q15459 793 aaKnown RBP10.89□□□□□ -0.67
CTNND1-237ENST00000534579 CSPP1Q1MSJ5 1256 aa10.88□□□□□ -0.67
CTNND1-237ENST00000534579 SYTL4Q96C24 671 aaPredicted RBP10.88□□□□□ -0.67
CTNND1-237ENST00000534579 GBP4Q96PP9 640 aa10.88□□□□□ -0.67
CTNND1-237ENST00000534579 PTMSP20962 102 aa10.88□□□□□ -0.67
CTNND1-237ENST00000534579 MIA2Q96PC5 1412 aa10.87□□□□□ -0.67
CTNND1-237ENST00000534579 CFAP70Q5T0N1 1121 aa10.87□□□□□ -0.67
CTNND1-237ENST00000534579 TTC5Q8N0Z6 440 aa10.87□□□□□ -0.67
CTNND1-237ENST00000534579 IPO9Q96P70 1041 aaKnown RBP10.87□□□□□ -0.67
CTNND1-237ENST00000534579 CDK13Q14004 1512 aaKnown RBP10.87□□□□□ -0.67
CTNND1-237ENST00000534579 NUTM2GQ5VZR2 741 aa10.87□□□□□ -0.67
CTNND1-237ENST00000534579 PCMTD1Q96MG8 357 aaPredicted RBP10.87□□□□□ -0.67
CTNND1-237ENST00000534579 BCL2L13Q9BXK5 485 aa10.87□□□□□ -0.67
CTNND1-237ENST00000534579 VPS37DQ86XT2 251 aa10.86□□□□□ -0.67
CTNND1-237ENST00000534579 PAF1Q8N7H5 531 aa10.86□□□□□ -0.67
CTNND1-237ENST00000534579 SUPT6HQ7KZ85 1726 aaKnown RBP10.86□□□□□ -0.67
CTNND1-237ENST00000534579 SYNE3Q6ZMZ3 975 aa10.86□□□□□ -0.67
CTNND1-237ENST00000534579 APAF1O14727 1248 aa10.86□□□□□ -0.67
CTNND1-237ENST00000534579 SETQ01105 290 aaPredicted RBP10.86□□□□□ -0.67
CTNND1-237ENST00000534579 TIAM1Q13009 1591 aa10.86□□□□□ -0.67
CTNND1-237ENST00000534579 GGNBP2Q9H3C7 697 aa10.85□□□□□ -0.67
CTNND1-237ENST00000534579 CUL7Q14999 1698 aa10.85□□□□□ -0.67
CTNND1-237ENST00000534579 CCAR1Q8IX12 1150 aaKnown RBP10.85□□□□□ -0.67
CTNND1-237ENST00000534579 NGEFQ8N5V2 710 aa10.85□□□□□ -0.67
CTNND1-237ENST00000534579 R3HCC1Q9Y3T6 440 aaKnown RBP10.85□□□□□ -0.67
CTNND1-237ENST00000534579 UNC13AQ9UPW8 1703 aa10.85□□□□□ -0.67
CTNND1-237ENST00000534579 H3BQV1 296 aa10.85□□□□□ -0.67
CTNND1-237ENST00000534579 EIF2S2P20042 333 aaKnown RBP10.85□□□□□ -0.67
CTNND1-237ENST00000534579 IFFO2Q5TF58 517 aa10.85□□□□□ -0.67
CTNND1-237ENST00000534579 THEMISQ8N1K5 641 aaPredicted RBP10.85□□□□□ -0.67
CTNND1-237ENST00000534579 EPRSP07814 1512 aaKnown RBP10.84□□□□□ -0.67
CTNND1-237ENST00000534579 E9PSI1 815 aa10.84□□□□□ -0.67
CTNND1-237ENST00000534579 PROSER2Q86WR7 435 aaPredicted RBP10.84□□□□□ -0.67
CTNND1-237ENST00000534579 KIF7Q2M1P5 1343 aa10.84□□□□□ -0.67
CTNND1-237ENST00000534579 KIF16BQ96L93 1317 aa10.84□□□□□ -0.67
CTNND1-237ENST00000534579 PPP1R1BQ9UD71 204 aaPredicted RBP10.84□□□□□ -0.67
CTNND1-237ENST00000534579 GRIN2AQ12879 1464 aa10.84□□□□□ -0.67
CTNND1-237ENST00000534579 MAGI1Q96QZ7 1491 aaPredicted RBP10.84□□□□□ -0.67
CTNND1-237ENST00000534579 RIPK4P57078 832 aa10.83□□□□□ -0.68
CTNND1-237ENST00000534579 NLRP6P59044 892 aa10.83□□□□□ -0.68
CTNND1-237ENST00000534579 KIF3AQ9Y496 699 aa10.83□□□□□ -0.68
CTNND1-237ENST00000534579 CCDC7Q96M83 1385 aa10.83□□□□□ -0.68
CTNND1-237ENST00000534579 TMEM132AQ24JP5 1023 aa10.83□□□□□ -0.68
CTNND1-237ENST00000534579 ESCO1Q5FWF5 840 aa10.83□□□□□ -0.68
CTNND1-237ENST00000534579 WWC2Q6AWC2 1192 aa10.83□□□□□ -0.68
CTNND1-237ENST00000534579 HFM1A2PYH4 1435 aa10.83□□□□□ -0.68
CTNND1-237ENST00000534579 DAPK1P53355 1430 aa10.83□□□□□ -0.68
CTNND1-237ENST00000534579 RBM33Q96EV2 1170 aaKnown RBP10.83□□□□□ -0.68
CTNND1-237ENST00000534579 PRAM1Q96QH2 718 aa10.83□□□□□ -0.68
CTNND1-237ENST00000534579 URB2Q14146 1524 aaKnown RBP10.82□□□□□ -0.68
CTNND1-237ENST00000534579 RAPGEF4Q8WZA2 1011 aa10.82□□□□□ -0.68
CTNND1-237ENST00000534579 GZF1Q9H116 711 aaPredicted RBP10.82□□□□□ -0.68
CTNND1-237ENST00000534579 POGZQ7Z3K3 1410 aa10.82□□□□□ -0.68
CTNND1-237ENST00000534579 HMOX1P09601 288 aa10.82□□□□□ -0.68
CTNND1-237ENST00000534579 NECTIN2Q92692 538 aa10.82□□□□□ -0.68
CTNND1-237ENST00000534579 ARHGEF11O15085 1522 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms