RNA–Protein interactions for RNA: ENST00000532787.5

CTNND1-233, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-233ENST00000532787 DCAF8Q5TAQ9 597 aa9.26□□□□□ -0.93
CTNND1-233ENST00000532787 ZNF330Q9Y3S2 320 aaPredicted RBP9.26□□□□□ -0.93
CTNND1-233ENST00000532787 KIF3BO15066 747 aa9.25□□□□□ -0.93
CTNND1-233ENST00000532787 ABCC8Q09428 1581 aa9.25□□□□□ -0.93
CTNND1-233ENST00000532787 PES1O00541 588 aaKnown RBP9.25□□□□□ -0.93
CTNND1-233ENST00000532787 NEXNQ0ZGT2 675 aa9.25□□□□□ -0.93
CTNND1-233ENST00000532787 CRBNQ96SW2 442 aa9.25□□□□□ -0.93
CTNND1-233ENST00000532787 PANK3Q9H999 370 aa9.25□□□□□ -0.93
CTNND1-233ENST00000532787 CCDC39Q9UFE4 941 aa9.25□□□□□ -0.93
CTNND1-233ENST00000532787 COG3Q96JB2 828 aa9.25□□□□□ -0.93
CTNND1-233ENST00000532787 CCAR2Q8N163 923 aaKnown RBP9.24□□□□□ -0.93
CTNND1-233ENST00000532787 FAM43AQ8N2R8 423 aa9.24□□□□□ -0.93
CTNND1-233ENST00000532787 VGFO15240 615 aaPredicted RBP9.24□□□□□ -0.93
CTNND1-233ENST00000532787 C1orf141Q5JVX7 400 aa9.24□□□□□ -0.93
CTNND1-233ENST00000532787 USP47Q96K76 1375 aa9.24□□□□□ -0.93
CTNND1-233ENST00000532787 MRE11P49959 708 aa9.24□□□□□ -0.93
CTNND1-233ENST00000532787 SASS6Q6UVJ0 657 aa9.24□□□□□ -0.93
CTNND1-233ENST00000532787 EXOC6Q8TAG9 804 aa9.24□□□□□ -0.93
CTNND1-233ENST00000532787 DZIP1LQ8IYY4 767 aaKnown RBP9.24□□□□□ -0.93
CTNND1-233ENST00000532787 NOL10Q9BSC4 688 aaKnown RBP9.24□□□□□ -0.93
CTNND1-233ENST00000532787 FRAT2O75474 233 aaPredicted RBP9.23□□□□□ -0.93
CTNND1-233ENST00000532787 ERCC4Q92889 916 aaPredicted RBP9.23□□□□□ -0.93
CTNND1-233ENST00000532787 NAT10Q9H0A0 1025 aaKnown RBP9.23□□□□□ -0.93
CTNND1-233ENST00000532787 PRM3Q9NNZ6 103 aa9.23□□□□□ -0.93
CTNND1-233ENST00000532787 WASHC2CQ9Y4E1 1318 aa9.23□□□□□ -0.93
CTNND1-233ENST00000532787 CCP110O43303 1012 aa9.23□□□□□ -0.93
CTNND1-233ENST00000532787 DDX58O95786 925 aaKnown RBP9.23□□□□□ -0.93
CTNND1-233ENST00000532787 MIA2Q96PC5 1412 aa9.23□□□□□ -0.93
CTNND1-233ENST00000532787 NCBP3Q53F19 620 aaKnown RBP9.23□□□□□ -0.93
CTNND1-233ENST00000532787 RUFY1Q96T51 708 aa9.23□□□□□ -0.93
CTNND1-233ENST00000532787 ERC2O15083 957 aa9.22□□□□□ -0.93
CTNND1-233ENST00000532787 HOMER1Q86YM7 354 aa9.22□□□□□ -0.93
CTNND1-233ENST00000532787 CWC15Q9P013 229 aaKnown RBP9.22□□□□□ -0.93
CTNND1-233ENST00000532787 ANO2Q9NQ90 1003 aa9.22□□□□□ -0.93
CTNND1-233ENST00000532787 CPLX1O14810 134 aa9.22□□□□□ -0.93
CTNND1-233ENST00000532787 TRDNQ13061 729 aa9.22□□□□□ -0.93
CTNND1-233ENST00000532787 MROH2BQ7Z745 1585 aa9.22□□□□□ -0.93
CTNND1-233ENST00000532787 ST20-MTHFSA0A0A6YYL1 179 aa9.22□□□□□ -0.93
CTNND1-233ENST00000532787 IFIT2P09913 472 aaKnown RBP9.22□□□□□ -0.93
CTNND1-233ENST00000532787 FOXD4L5Q5VV16 416 aaPredicted RBP9.22□□□□□ -0.93
CTNND1-233ENST00000532787 MCTP1Q6DN14 999 aa9.22□□□□□ -0.93
CTNND1-233ENST00000532787 CCDC73Q6ZRK6 1079 aa9.22□□□□□ -0.93
CTNND1-233ENST00000532787 BICD2Q8TD16 824 aa9.22□□□□□ -0.93
CTNND1-233ENST00000532787 FOXD4L4Q8WXT5 416 aaPredicted RBP9.22□□□□□ -0.93
CTNND1-233ENST00000532787 SMC3Q9UQE7 1217 aa9.22□□□□□ -0.93
CTNND1-233ENST00000532787 KIF7Q2M1P5 1343 aa9.21□□□□□ -0.93
CTNND1-233ENST00000532787 VPS53Q5VIR6 699 aa9.21□□□□□ -0.93
CTNND1-233ENST00000532787 MNS1Q8NEH6 495 aa9.21□□□□□ -0.93
CTNND1-233ENST00000532787 RUNDC1Q96C34 613 aa9.21□□□□□ -0.93
CTNND1-233ENST00000532787 HSP90B2PQ58FF3 399 aa9.21□□□□□ -0.94
CTNND1-233ENST00000532787 ZNF592Q92610 1267 aa9.21□□□□□ -0.94
CTNND1-233ENST00000532787 FHOD3Q2V2M9 1422 aa9.21□□□□□ -0.94
CTNND1-233ENST00000532787 PCMTD1Q96MG8 357 aaPredicted RBP9.21□□□□□ -0.94
CTNND1-233ENST00000532787 CUX1P39880 1505 aa9.21□□□□□ -0.94
CTNND1-233ENST00000532787 MCM2P49736 904 aa9.2□□□□□ -0.94
CTNND1-233ENST00000532787 NINLQ9Y2I6 1382 aa9.2□□□□□ -0.94
CTNND1-233ENST00000532787 GTF2E1P29083 439 aaPredicted RBP9.2□□□□□ -0.94
CTNND1-233ENST00000532787 SAFBQ15424 915 aaKnown RBP eCLIP9.2□□□□□ -0.94
CTNND1-233ENST00000532787 DIAPH1O60610 1272 aaKnown RBP9.2□□□□□ -0.94
CTNND1-233ENST00000532787 MBD3O95983 291 aa9.2□□□□□ -0.94
CTNND1-233ENST00000532787 HNRNPMP52272 730 aaKnown RBP eCLIP9.2□□□□□ -0.945e-7■■■■□ 21
CTNND1-233ENST00000532787 GNAI1P63096 354 aa9.2□□□□□ -0.94
CTNND1-233ENST00000532787 TEFQ10587 303 aa9.2□□□□□ -0.94
CTNND1-233ENST00000532787 DCTN1Q14203 1278 aa9.2□□□□□ -0.94
CTNND1-233ENST00000532787 RRP12Q5JTH9 1297 aaKnown RBP9.2□□□□□ -0.94
CTNND1-233ENST00000532787 MYO6Q9UM54 1294 aa9.2□□□□□ -0.94
CTNND1-233ENST00000532787 COG6Q9Y2V7 657 aa9.2□□□□□ -0.94
CTNND1-233ENST00000532787 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.2□□□□□ -0.94
CTNND1-233ENST00000532787 ERICH2A1L162 156 aa9.2□□□□□ -0.94
CTNND1-233ENST00000532787 ANO8Q9HCE9 1232 aaPredicted RBP9.2□□□□□ -0.94
CTNND1-233ENST00000532787 CCDC66A2RUB6 948 aa9.19□□□□□ -0.94
CTNND1-233ENST00000532787 C9orf78Q9NZ63 289 aaPredicted RBP9.19□□□□□ -0.94
CTNND1-233ENST00000532787 PATL2C9JE40 543 aaKnown RBP9.19□□□□□ -0.94
CTNND1-233ENST00000532787 CDC45O75419 566 aa9.19□□□□□ -0.94
CTNND1-233ENST00000532787 PSMA5P28066 241 aa9.19□□□□□ -0.94
CTNND1-233ENST00000532787 G3BP1Q13283 466 aaKnown RBP eCLIP9.19□□□□□ -0.948e-9■□□□□ 11.1
CTNND1-233ENST00000532787 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.19□□□□□ -0.942e-8■□□□□ 11.3
CTNND1-233ENST00000532787 C22orf23Q9BZE7 217 aa9.19□□□□□ -0.94
CTNND1-233ENST00000532787 TCEAL9Q9UHQ7 104 aa9.19□□□□□ -0.94
CTNND1-233ENST00000532787 OLFM4Q6UX06 510 aa9.18□□□□□ -0.94
CTNND1-233ENST00000532787 TTC5Q8N0Z6 440 aa9.18□□□□□ -0.94
CTNND1-233ENST00000532787 CNTLNQ9NXG0 1405 aa9.18□□□□□ -0.94
CTNND1-233ENST00000532787 HMGN5P82970 282 aaKnown RBP9.18□□□□□ -0.94
CTNND1-233ENST00000532787 FAM13BQ9NYF5 915 aa9.18□□□□□ -0.94
CTNND1-233ENST00000532787 BRD4O60885 1362 aaPredicted RBP9.18□□□□□ -0.94
CTNND1-233ENST00000532787 CCDC173Q0VFZ6 552 aa9.18□□□□□ -0.94
CTNND1-233ENST00000532787 TRAK1Q9UPV9 953 aa9.18□□□□□ -0.94
CTNND1-233ENST00000532787 RRP7AQ9Y3A4 280 aaKnown RBP9.18□□□□□ -0.94
CTNND1-233ENST00000532787 RDXP35241 583 aaKnown RBP9.18□□□□□ -0.94
CTNND1-233ENST00000532787 BRMS1Q9HCU9 246 aa9.17□□□□□ -0.94
CTNND1-233ENST00000532787 IFT57Q9NWB7 429 aa9.17□□□□□ -0.94
CTNND1-233ENST00000532787 MYOM3Q5VTT5 1437 aa9.17□□□□□ -0.94
CTNND1-233ENST00000532787 XBP1P17861 261 aa9.17□□□□□ -0.94
CTNND1-233ENST00000532787 PIP4K2AP48426 406 aaPredicted RBP9.17□□□□□ -0.94
CTNND1-233ENST00000532787 TRIM34Q9BYJ4 488 aa9.17□□□□□ -0.94
CTNND1-233ENST00000532787 HIP1O00291 1037 aa9.16□□□□□ -0.94
CTNND1-233ENST00000532787 APAF1O14727 1248 aa9.16□□□□□ -0.94
CTNND1-233ENST00000532787 NASPP49321 788 aaPredicted RBP9.16□□□□□ -0.94
CTNND1-233ENST00000532787 PLIN1O60240 522 aa9.16□□□□□ -0.94
CTNND1-233ENST00000532787 PDE4CQ08493 712 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms