RNA–Protein interactions for RNA: ENST00000532278.1

SLC43A3-220, Transcript of solute carrier family 43 member 3, humanhuman

TSL 4

Gene SLC43A3, Length 506 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC43A3-220ENST00000532278 CHGAP10645 457 aaKnown RBP35.38■■■■□ 3.25
SLC43A3-220ENST00000532278 LRRC7Q96NW7 1537 aa35.37■■■■□ 3.25
SLC43A3-220ENST00000532278 ACIN1Q9UKV3 1341 aaKnown RBP35.35■■■■□ 3.25
SLC43A3-220ENST00000532278 SLC4A1APQ9BWU0 796 aaKnown RBP35.35■■■■□ 3.25
SLC43A3-220ENST00000532278 CLTCL1P53675 1640 aa35.33■■■■□ 3.25
SLC43A3-220ENST00000532278 UBAP1LF5GYI3 381 aa35.33■■■■□ 3.25
SLC43A3-220ENST00000532278 PPP1R15AO75807 674 aaPredicted RBP35.32■■■■□ 3.24
SLC43A3-220ENST00000532278 SLC26A8Q96RN1 970 aa35.3■■■■□ 3.24
SLC43A3-220ENST00000532278 KCNA6P17658 529 aa35.28■■■■□ 3.24
SLC43A3-220ENST00000532278 SETD5Q9C0A6 1442 aa35.28■■■■□ 3.24
SLC43A3-220ENST00000532278 KIF1BO60333 1816 aa35.26■■■■□ 3.24
SLC43A3-220ENST00000532278 NWD1Q149M9 1564 aa35.25■■■■□ 3.23
SLC43A3-220ENST00000532278 TOM1O60784 492 aa35.25■■■■□ 3.23
SLC43A3-220ENST00000532278 BCANQ96GW7 911 aa35.24■■■■□ 3.23
SLC43A3-220ENST00000532278 DIP2AQ14689 1571 aa35.24■■■■□ 3.23
SLC43A3-220ENST00000532278 TBX22Q9Y458 520 aa35.23■■■■□ 3.23
SLC43A3-220ENST00000532278 ADAMTS13Q76LX8 1427 aa35.21■■■■□ 3.23
SLC43A3-220ENST00000532278 NKTRP30414 1462 aaKnown RBP35.21■■■■□ 3.23
SLC43A3-220ENST00000532278 XIRP1Q702N8 1843 aaKnown RBP35.2■■■■□ 3.23
SLC43A3-220ENST00000532278 CHD2O14647 1828 aaKnown RBP35.2■■■■□ 3.23
SLC43A3-220ENST00000532278 MPHOSPH9Q99550 1183 aa35.19■■■■□ 3.22
SLC43A3-220ENST00000532278 ALKQ9UM73 1620 aa35.18■■■■□ 3.22
SLC43A3-220ENST00000532278 NUTM2DQ5VT03 806 aaPredicted RBP35.18■■■■□ 3.22
SLC43A3-220ENST00000532278 ZNF326Q5BKZ1 582 aaKnown RBP35.17■■■■□ 3.22
SLC43A3-220ENST00000532278 PIK3R4Q99570 1358 aa35.16■■■■□ 3.22
SLC43A3-220ENST00000532278 NEXMIFQ5QGS0 1516 aa35.16■■■■□ 3.22
SLC43A3-220ENST00000532278 SETBP1Q9Y6X0 1596 aa35.14■■■■□ 3.22
SLC43A3-220ENST00000532278 RAB3GAP2Q9H2M9 1393 aa35.13■■■■□ 3.21
SLC43A3-220ENST00000532278 NRXN3Q9Y4C0 1643 aa35.11■■■■□ 3.21
SLC43A3-220ENST00000532278 TMEM94Q12767 1356 aa35.11■■■■□ 3.21
SLC43A3-220ENST00000532278 FOXD1Q16676 465 aa35.1■■■■□ 3.21
SLC43A3-220ENST00000532278 SENP3Q9H4L4 574 aaPredicted RBP35.09■■■■□ 3.21
SLC43A3-220ENST00000532278 PROSER2Q86WR7 435 aaPredicted RBP35.08■■■■□ 3.21
SLC43A3-220ENST00000532278 RPGRIP1LQ68CZ1 1315 aa35.06■■■■□ 3.2
SLC43A3-220ENST00000532278 CCDC144AA2RUR9 1427 aa35.06■■■■□ 3.2
SLC43A3-220ENST00000532278 PIP4K2BP78356 416 aa35.05■■■■□ 3.2
SLC43A3-220ENST00000532278 HRCP23327 699 aa35.04■■■■□ 3.2
SLC43A3-220ENST00000532278 NCOA3Q9Y6Q9 1424 aa35.02■■■■□ 3.2
SLC43A3-220ENST00000532278 SCAF1Q9H7N4 1312 aaKnown RBP35.02■■■■□ 3.2
SLC43A3-220ENST00000532278 VGFO15240 615 aaPredicted RBP35■■■■□ 3.19
SLC43A3-220ENST00000532278 PPLO60437 1756 aa35■■■■□ 3.19
SLC43A3-220ENST00000532278 SPATA31E1Q6ZUB1 1445 aa34.98■■■■□ 3.19
SLC43A3-220ENST00000532278 PTPRUQ92729 1446 aa34.97■■■■□ 3.19
SLC43A3-220ENST00000532278 XRN1Q8IZH2 1706 aaKnown RBP34.95■■■■□ 3.18
SLC43A3-220ENST00000532278 MSH6P52701 1360 aa34.93■■■■□ 3.18
SLC43A3-220ENST00000532278 HSPA1LP34931 641 aa34.93■■■■□ 3.18
SLC43A3-220ENST00000532278 RBM33Q96EV2 1170 aaKnown RBP34.93■■■■□ 3.18
SLC43A3-220ENST00000532278 AMOTL2Q9Y2J4 779 aa34.93■■■■□ 3.18
SLC43A3-220ENST00000532278 METP08581 1390 aa34.92■■■■□ 3.18
SLC43A3-220ENST00000532278 SETD1AO15047 1707 aaKnown RBP34.89■■■■□ 3.18
SLC43A3-220ENST00000532278 FAM135BQ49AJ0 1406 aa34.89■■■■□ 3.18
SLC43A3-220ENST00000532278 IFT172Q9UG01 1749 aa34.87■■■■□ 3.17
SLC43A3-220ENST00000532278 ANKRD30BQ9BXX2 1392 aa34.86■■■■□ 3.17
SLC43A3-220ENST00000532278 RGL3Q3MIN7 710 aa34.81■■■■□ 3.16
SLC43A3-220ENST00000532278 C19orf44Q9H6X5 657 aa34.8■■■■□ 3.16
SLC43A3-220ENST00000532278 PRAG1Q86YV5 1406 aa34.8■■■■□ 3.16
SLC43A3-220ENST00000532278 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.79■■■■□ 3.16
SLC43A3-220ENST00000532278 ADGRF5Q8IZF2 1346 aa34.77■■■■□ 3.16
SLC43A3-220ENST00000532278 ROBO1Q9Y6N7 1651 aa34.76■■■■□ 3.16
SLC43A3-220ENST00000532278 C14orf37Q86TY3 774 aa34.76■■■■□ 3.16
SLC43A3-220ENST00000532278 SLAIN2Q9P270 581 aa34.76■■■■□ 3.16
SLC43A3-220ENST00000532278 DCCP43146 1447 aa34.75■■■■□ 3.15
SLC43A3-220ENST00000532278 PTCH1Q13635 1447 aa34.75■■■■□ 3.15
SLC43A3-220ENST00000532278 CADPS2Q86UW7 1296 aa34.75■■■■□ 3.15
SLC43A3-220ENST00000532278 PIK3C2GO75747 1445 aa34.72■■■■□ 3.15
SLC43A3-220ENST00000532278 ATF3P18847 181 aa34.7■■■■□ 3.15
SLC43A3-220ENST00000532278 MYOM2P54296 1465 aa34.69■■■■□ 3.14
SLC43A3-220ENST00000532278 DISP3Q9P2K9 1392 aa34.68■■■■□ 3.14
SLC43A3-220ENST00000532278 NRXN1Q9ULB1 1477 aa34.68■■■■□ 3.14
SLC43A3-220ENST00000532278 ADGRL3Q9HAR2 1447 aa34.67■■■■□ 3.14
SLC43A3-220ENST00000532278 ROBO2Q9HCK4 1378 aa34.64■■■■□ 3.14
SLC43A3-220ENST00000532278 NALCNQ8IZF0 1738 aa34.62■■■■□ 3.13
SLC43A3-220ENST00000532278 TECPR2O15040 1411 aa34.6■■■■□ 3.13
SLC43A3-220ENST00000532278 MED1Q15648 1581 aaPredicted RBP34.59■■■■□ 3.13
SLC43A3-220ENST00000532278 ASXL1Q8IXJ9 1541 aa34.58■■■■□ 3.13
SLC43A3-220ENST00000532278 LAMC1P11047 1609 aa34.58■■■■□ 3.13
SLC43A3-220ENST00000532278 C14orf93Q9H972 538 aaKnown RBP34.57■■■■□ 3.12
SLC43A3-220ENST00000532278 LRPPRCP42704 1394 aaKnown RBP34.57■■■■□ 3.12
SLC43A3-220ENST00000532278 MST1RQ04912 1400 aa34.56■■■■□ 3.12
SLC43A3-220ENST00000532278 KNDC1Q76NI1 1749 aa34.55■■■■□ 3.12
SLC43A3-220ENST00000532278 ABCC11Q96J66 1382 aa34.55■■■■□ 3.12
SLC43A3-220ENST00000532278 STAC3Q96MF2 364 aa34.55■■■■□ 3.12
SLC43A3-220ENST00000532278 PHLPP1O60346 1717 aa34.55■■■■□ 3.12
SLC43A3-220ENST00000532278 AHDC1Q5TGY3 1603 aaPredicted RBP34.52■■■■□ 3.12
SLC43A3-220ENST00000532278 YTHDC2Q9H6S0 1430 aaKnown RBP34.5■■■■□ 3.11
SLC43A3-220ENST00000532278 TMEM132EQ6IEE7 984 aa34.49■■■■□ 3.11
SLC43A3-220ENST00000532278 BRINP3Q76B58 766 aa34.49■■■■□ 3.11
SLC43A3-220ENST00000532278 COL16A1Q07092 1604 aaPredicted RBP34.48■■■■□ 3.11
SLC43A3-220ENST00000532278 CFAP70Q5T0N1 1121 aa34.46■■■■□ 3.11
SLC43A3-220ENST00000532278 SIRT1Q96EB6 747 aa34.46■■■■□ 3.11
SLC43A3-220ENST00000532278 STK26Q9P289 416 aa34.45■■■■□ 3.11
SLC43A3-220ENST00000532278 DHX57Q6P158 1386 aaKnown RBP34.45■■■■□ 3.11
SLC43A3-220ENST00000532278 DCAF11Q8TEB1 546 aa34.44■■■■□ 3.1
SLC43A3-220ENST00000532278 CDC42BPGQ6DT37 1551 aa34.43■■■■□ 3.1
SLC43A3-220ENST00000532278 C1orf167Q5SNV9 1468 aa34.42■■■■□ 3.1
SLC43A3-220ENST00000532278 JCADQ9P266 1359 aa34.41■■■■□ 3.1
SLC43A3-220ENST00000532278 NHSL1Q5SYE7 1610 aa34.4■■■■□ 3.1
SLC43A3-220ENST00000532278 ADGRB1O14514 1584 aa34.39■■■■□ 3.1
SLC43A3-220ENST00000532278 WAPLQ7Z5K2 1190 aa34.37■■■■□ 3.09
SLC43A3-220ENST00000532278 KDM2AQ9Y2K7 1162 aa34.37■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms