RNA–Protein interactions for RNA: ENST00000530820.5

CAPRIN1-209, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,454 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-209ENST00000530820 TNPO1Q92973 898 aaKnown RBP10.94□□□□□ -0.66
CAPRIN1-209ENST00000530820 ZNF622Q969S3 477 aaKnown RBP eCLIP10.94□□□□□ -0.664e-13■■□□□ 13
CAPRIN1-209ENST00000530820 PLCD4Q9BRC7 762 aa10.94□□□□□ -0.66
CAPRIN1-209ENST00000530820 RBSNQ9H1K0 784 aa10.94□□□□□ -0.66
CAPRIN1-209ENST00000530820 CT47B1P0C2W7 299 aaPredicted RBP10.94□□□□□ -0.66
CAPRIN1-209ENST00000530820 SIRT1Q96EB6 747 aa10.94□□□□□ -0.66
CAPRIN1-209ENST00000530820 NEK11Q8NG66 645 aa10.93□□□□□ -0.66
CAPRIN1-209ENST00000530820 HNRNPH2P55795 449 aaKnown RBP10.93□□□□□ -0.66
CAPRIN1-209ENST00000530820 NUTM2GQ5VZR2 741 aa10.93□□□□□ -0.66
CAPRIN1-209ENST00000530820 RTF1Q92541 710 aaKnown RBP10.93□□□□□ -0.66
CAPRIN1-209ENST00000530820 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.93□□□□□ -0.66
CAPRIN1-209ENST00000530820 PPP2R5AQ15172 486 aa10.92□□□□□ -0.66
CAPRIN1-209ENST00000530820 ANTXR1Q9H6X2 564 aa10.92□□□□□ -0.66
CAPRIN1-209ENST00000530820 FEZ2Q9UHY8 353 aaPredicted RBP10.92□□□□□ -0.66
CAPRIN1-209ENST00000530820 PRIM1P49642 420 aaKnown RBP10.92□□□□□ -0.66
CAPRIN1-209ENST00000530820 EIF4G2P78344 907 aaKnown RBP eCLIP10.92□□□□□ -0.66
CAPRIN1-209ENST00000530820 SPC24Q8NBT2 197 aa10.92□□□□□ -0.66
CAPRIN1-209ENST00000530820 KAT6BQ8WYB5 2073 aa10.92□□□□□ -0.66
CAPRIN1-209ENST00000530820 ZNF500O60304 480 aaPredicted RBP10.92□□□□□ -0.66
CAPRIN1-209ENST00000530820 BIRC2Q13490 618 aa10.92□□□□□ -0.66
CAPRIN1-209ENST00000530820 HSCBQ8IWL3 235 aa10.92□□□□□ -0.66
CAPRIN1-209ENST00000530820 TDO2P48775 406 aa10.91□□□□□ -0.66
CAPRIN1-209ENST00000530820 GTF3C6Q969F1 213 aa10.91□□□□□ -0.66
CAPRIN1-209ENST00000530820 ZKSCAN5Q9Y2L8 839 aa10.91□□□□□ -0.66
CAPRIN1-209ENST00000530820 SOGA1O94964 1423 aa10.91□□□□□ -0.66
CAPRIN1-209ENST00000530820 SSFA2P28290 1259 aa10.91□□□□□ -0.66
CAPRIN1-209ENST00000530820 KIAA2012Q0VF49 1180 aa10.91□□□□□ -0.66
CAPRIN1-209ENST00000530820 ARMC3Q5W041 872 aa10.91□□□□□ -0.66
CAPRIN1-209ENST00000530820 DDX11L8A8MPP1 907 aa10.9□□□□□ -0.66
CAPRIN1-209ENST00000530820 CSPP1Q1MSJ5 1256 aa10.9□□□□□ -0.66
CAPRIN1-209ENST00000530820 SYCE3A1L190 88 aa10.9□□□□□ -0.66
CAPRIN1-209ENST00000530820 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.9□□□□□ -0.662e-10■■■□□ 14.9
CAPRIN1-209ENST00000530820 KTN1Q86UP2 1357 aaKnown RBP10.9□□□□□ -0.66
CAPRIN1-209ENST00000530820 ZCCHC6Q5VYS8 1495 aaKnown RBP10.9□□□□□ -0.66
CAPRIN1-209ENST00000530820 ZNF513Q8N8E2 541 aaPredicted RBP10.9□□□□□ -0.66
CAPRIN1-209ENST00000530820 RIOK3O14730 519 aaKnown RBP10.89□□□□□ -0.67
CAPRIN1-209ENST00000530820 MYRIPQ8NFW9 859 aa10.89□□□□□ -0.67
CAPRIN1-209ENST00000530820 NOL10Q9BSC4 688 aaKnown RBP10.89□□□□□ -0.67
CAPRIN1-209ENST00000530820 NOL7Q9UMY1 257 aaKnown RBP10.89□□□□□ -0.67
CAPRIN1-209ENST00000530820 SMG6Q86US8 1419 aaKnown RBP10.89□□□□□ -0.67
CAPRIN1-209ENST00000530820 EGFL6Q8IUX8 553 aa10.89□□□□□ -0.67
CAPRIN1-209ENST00000530820 U2SURPO15042 1029 aaKnown RBP10.88□□□□□ -0.67
CAPRIN1-209ENST00000530820 ARID4AP29374 1257 aaPredicted RBP10.88□□□□□ -0.67
CAPRIN1-209ENST00000530820 RAD51AP2Q09MP3 1159 aa10.88□□□□□ -0.67
CAPRIN1-209ENST00000530820 MEX3CQ5U5Q3 659 aaKnown RBP10.88□□□□□ -0.67
CAPRIN1-209ENST00000530820 USP19O94966 1318 aa10.88□□□□□ -0.67
CAPRIN1-209ENST00000530820 IGHDP01880 384 aa10.88□□□□□ -0.67
CAPRIN1-209ENST00000530820 CLUAP1Q96AJ1 413 aa10.88□□□□□ -0.67
CAPRIN1-209ENST00000530820 SLC24A3Q9HC58 644 aa10.88□□□□□ -0.67
CAPRIN1-209ENST00000530820 PICK1Q9NRD5 415 aa10.88□□□□□ -0.67
CAPRIN1-209ENST00000530820 DHX16O60231 1041 aaKnown RBP10.87□□□□□ -0.67
CAPRIN1-209ENST00000530820 SLFN14P0C7P3 912 aa10.87□□□□□ -0.67
CAPRIN1-209ENST00000530820 DHX8Q14562 1220 aaKnown RBP10.87□□□□□ -0.67
CAPRIN1-209ENST00000530820 MYCBPQ99417 103 aaPredicted RBP10.87□□□□□ -0.67
CAPRIN1-209ENST00000530820 SMC4Q9NTJ3 1288 aa10.87□□□□□ -0.67
CAPRIN1-209ENST00000530820 CALCOCO1Q9P1Z2 691 aa10.87□□□□□ -0.67
CAPRIN1-209ENST00000530820 SH3BP1Q9Y3L3 701 aa10.87□□□□□ -0.67
CAPRIN1-209ENST00000530820 PRPF40AO75400 957 aaKnown RBP10.87□□□□□ -0.67
CAPRIN1-209ENST00000530820 CHAF1AQ13111 956 aaPredicted RBP10.87□□□□□ -0.67
CAPRIN1-209ENST00000530820 GBP4Q96PP9 640 aa10.87□□□□□ -0.67
CAPRIN1-209ENST00000530820 CARD10Q9BWT7 1032 aa10.87□□□□□ -0.67
CAPRIN1-209ENST00000530820 LCMT1Q9UIC8 334 aa10.86□□□□□ -0.67
CAPRIN1-209ENST00000530820 CENPQQ7L2Z9 268 aaPredicted RBP10.86□□□□□ -0.67
CAPRIN1-209ENST00000530820 GOLGA6L22H0YM25 854 aa10.86□□□□□ -0.67
CAPRIN1-209ENST00000530820 WRNQ14191 1432 aaPredicted RBP eCLIP10.86□□□□□ -0.67
CAPRIN1-209ENST00000530820 TTC19Q6DKK2 380 aaPredicted RBP10.85□□□□□ -0.67
CAPRIN1-209ENST00000530820 NOLC1Q14978 699 aaKnown RBP eCLIP10.85□□□□□ -0.67
CAPRIN1-209ENST00000530820 NOL8Q76FK4 1167 aaKnown RBP10.85□□□□□ -0.67
CAPRIN1-209ENST00000530820 COG6Q9Y2V7 657 aa10.85□□□□□ -0.67
CAPRIN1-209ENST00000530820 SYT10Q6XYQ8 523 aa10.84□□□□□ -0.67
CAPRIN1-209ENST00000530820 C16orf45Q96MC5 204 aaPredicted RBP10.84□□□□□ -0.67
CAPRIN1-209ENST00000530820 BCL2L13Q9BXK5 485 aa10.84□□□□□ -0.67
CAPRIN1-209ENST00000530820 RASSF4Q9H2L5 321 aa10.84□□□□□ -0.67
CAPRIN1-209ENST00000530820 CEP83Q9Y592 693 aa10.84□□□□□ -0.67
CAPRIN1-209ENST00000530820 RBM42Q9BTD8 480 aaKnown RBP10.84□□□□□ -0.67
CAPRIN1-209ENST00000530820 USP25Q9UHP3 1055 aa10.84□□□□□ -0.67
CAPRIN1-209ENST00000530820 MPHOSPH10O00566 681 aaKnown RBP10.83□□□□□ -0.67
CAPRIN1-209ENST00000530820 DTNBO60941 627 aa10.83□□□□□ -0.67
CAPRIN1-209ENST00000530820 SYTL4Q96C24 671 aaPredicted RBP10.83□□□□□ -0.67
CAPRIN1-209ENST00000530820 RBM5P52756 815 aaKnown RBP eCLIP10.83□□□□□ -0.68
CAPRIN1-209ENST00000530820 TERF2Q15554 542 aa10.83□□□□□ -0.68
CAPRIN1-209ENST00000530820 SGSM3Q96HU1 749 aa10.83□□□□□ -0.68
CAPRIN1-209ENST00000530820 RUSC2Q8N2Y8 1516 aa10.83□□□□□ -0.68
CAPRIN1-209ENST00000530820 KRBA2Q6ZNG9 492 aa10.82□□□□□ -0.68
CAPRIN1-209ENST00000530820 C22orf23Q9BZE7 217 aa10.82□□□□□ -0.68
CAPRIN1-209ENST00000530820 MMP14P50281 582 aa10.82□□□□□ -0.68
CAPRIN1-209ENST00000530820 PPP1R9BQ96SB3 815 aa10.82□□□□□ -0.68
CAPRIN1-209ENST00000530820 CHIC2Q9UKJ5 165 aa10.82□□□□□ -0.68
CAPRIN1-209ENST00000530820 CLIP1P30622 1438 aa10.81□□□□□ -0.68
CAPRIN1-209ENST00000530820 AXDND1Q5T1B0 1012 aaPredicted RBP10.81□□□□□ -0.68
CAPRIN1-209ENST00000530820 PANK1Q8TE04 598 aa10.81□□□□□ -0.68
CAPRIN1-209ENST00000530820 GEMIN8Q9NWZ8 242 aaKnown RBP10.81□□□□□ -0.68
CAPRIN1-209ENST00000530820 CCDC172P0C7W6 258 aa10.81□□□□□ -0.68
CAPRIN1-209ENST00000530820 CCDC39Q9UFE4 941 aa10.81□□□□□ -0.68
CAPRIN1-209ENST00000530820 SUFUQ9UMX1 484 aa10.81□□□□□ -0.68
CAPRIN1-209ENST00000530820 BCAR3O75815 825 aa10.81□□□□□ -0.68
CAPRIN1-209ENST00000530820 ZSCAN23Q3MJ62 389 aa10.81□□□□□ -0.68
CAPRIN1-209ENST00000530820 CCDC191Q8NCU4 936 aa10.81□□□□□ -0.68
CAPRIN1-209ENST00000530820 NEUROD2Q15784 382 aa10.8□□□□□ -0.68
CAPRIN1-209ENST00000530820 OGFRQ9NZT2 677 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms