RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 TMEM2Q9UHN6 1383 aa11.39□□□□□ -0.59
SSBP3-211ENST00000528787 ZFYVE9O95405 1425 aa11.38□□□□□ -0.59
SSBP3-211ENST00000528787 MYO5BQ9ULV0 1848 aa11.38□□□□□ -0.59
SSBP3-211ENST00000528787 POLR1AO95602 1720 aaPredicted RBP11.38□□□□□ -0.59
SSBP3-211ENST00000528787 SPATA31E1Q6ZUB1 1445 aa11.37□□□□□ -0.59
SSBP3-211ENST00000528787 PPLO60437 1756 aa11.37□□□□□ -0.59
SSBP3-211ENST00000528787 NEUROD1Q13562 356 aa11.37□□□□□ -0.59
SSBP3-211ENST00000528787 MYOM2P54296 1465 aa11.36□□□□□ -0.59
SSBP3-211ENST00000528787 LMTK3Q96Q04 1460 aa11.36□□□□□ -0.59
SSBP3-211ENST00000528787 SCAF11Q99590 1463 aaKnown RBP11.36□□□□□ -0.59
SSBP3-211ENST00000528787 ARHGAP23Q9P227 1491 aa11.36□□□□□ -0.59
SSBP3-211ENST00000528787 RIMS2Q9UQ26 1411 aa11.35□□□□□ -0.59
SSBP3-211ENST00000528787 LAMC1P11047 1609 aa11.35□□□□□ -0.59
SSBP3-211ENST00000528787 RGL3Q3MIN7 710 aa11.35□□□□□ -0.59
SSBP3-211ENST00000528787 TXNDC2Q86VQ3 553 aa11.35□□□□□ -0.59
SSBP3-211ENST00000528787 IFT172Q9UG01 1749 aa11.35□□□□□ -0.59
SSBP3-211ENST00000528787 DIP2AQ14689 1571 aa11.33□□□□□ -0.6
SSBP3-211ENST00000528787 DCAF11Q8TEB1 546 aa11.33□□□□□ -0.6
SSBP3-211ENST00000528787 NEXMIFQ5QGS0 1516 aa11.33□□□□□ -0.6
SSBP3-211ENST00000528787 PLEKHG1Q9ULL1 1385 aa11.32□□□□□ -0.6
SSBP3-211ENST00000528787 BCANQ96GW7 911 aa11.32□□□□□ -0.6
SSBP3-211ENST00000528787 SIN3AQ96ST3 1273 aa11.32□□□□□ -0.6
SSBP3-211ENST00000528787 KIAA1210Q9ULL0 1709 aa11.32□□□□□ -0.6
SSBP3-211ENST00000528787 MED14O60244 1454 aa11.32□□□□□ -0.6
SSBP3-211ENST00000528787 IQGAP1P46940 1657 aa11.31□□□□□ -0.6
SSBP3-211ENST00000528787 PIK3R4Q99570 1358 aa11.3□□□□□ -0.6
SSBP3-211ENST00000528787 SETBP1Q9Y6X0 1596 aa11.29□□□□□ -0.6
SSBP3-211ENST00000528787 NPHP4O75161 1426 aaPredicted RBP11.29□□□□□ -0.6
SSBP3-211ENST00000528787 SLC24A1O60721 1099 aa11.29□□□□□ -0.6
SSBP3-211ENST00000528787 L3MBTL2Q969R5 705 aa11.29□□□□□ -0.6
SSBP3-211ENST00000528787 NRXN1Q9ULB1 1477 aa11.28□□□□□ -0.6
SSBP3-211ENST00000528787 PIK3C2GO75747 1445 aa11.27□□□□□ -0.6
SSBP3-211ENST00000528787 KDM2AQ9Y2K7 1162 aa11.27□□□□□ -0.61
SSBP3-211ENST00000528787 TBX22Q9Y458 520 aa11.27□□□□□ -0.61
SSBP3-211ENST00000528787 PRAG1Q86YV5 1406 aa11.26□□□□□ -0.61
SSBP3-211ENST00000528787 EIF3AQ14152 1382 aaKnown RBP11.25□□□□□ -0.61
SSBP3-211ENST00000528787 STRCQ7RTU9 1775 aa11.24□□□□□ -0.61
SSBP3-211ENST00000528787 LTKP29376 864 aa11.24□□□□□ -0.61
SSBP3-211ENST00000528787 HSPA2P54652 639 aa11.24□□□□□ -0.61
SSBP3-211ENST00000528787 C14orf93Q9H972 538 aaKnown RBP11.24□□□□□ -0.61
SSBP3-211ENST00000528787 ALKQ9UM73 1620 aa11.24□□□□□ -0.61
SSBP3-211ENST00000528787 ROCK2O75116 1388 aaKnown RBP11.22□□□□□ -0.61
SSBP3-211ENST00000528787 TRPM1Q7Z4N2 1603 aa11.22□□□□□ -0.61
SSBP3-211ENST00000528787 RALGAPBQ86X10 1494 aa11.22□□□□□ -0.61
SSBP3-211ENST00000528787 ADGRF5Q8IZF2 1346 aa11.22□□□□□ -0.61
SSBP3-211ENST00000528787 NCKAP5LQ9HCH0 1330 aa11.22□□□□□ -0.61
SSBP3-211ENST00000528787 NUTM2DQ5VT03 806 aaPredicted RBP11.21□□□□□ -0.61
SSBP3-211ENST00000528787 SIRT1Q96EB6 747 aa11.2□□□□□ -0.62
SSBP3-211ENST00000528787 CHD2O14647 1828 aaKnown RBP11.2□□□□□ -0.62
SSBP3-211ENST00000528787 NRXN3Q9Y4C0 1643 aa11.2□□□□□ -0.62
SSBP3-211ENST00000528787 NKTRP30414 1462 aaKnown RBP11.19□□□□□ -0.62
SSBP3-211ENST00000528787 ADAMTS13Q76LX8 1427 aa11.19□□□□□ -0.62
SSBP3-211ENST00000528787 KNDC1Q76NI1 1749 aa11.19□□□□□ -0.62
SSBP3-211ENST00000528787 KCNA6P17658 529 aa11.19□□□□□ -0.62
SSBP3-211ENST00000528787 CARD11Q9BXL7 1154 aa11.19□□□□□ -0.62
SSBP3-211ENST00000528787 CPS1P31327 1500 aa11.19□□□□□ -0.62
SSBP3-211ENST00000528787 NCOA3Q9Y6Q9 1424 aa11.18□□□□□ -0.62
SSBP3-211ENST00000528787 SETD1AO15047 1707 aaKnown RBP11.18□□□□□ -0.62
SSBP3-211ENST00000528787 LRPPRCP42704 1394 aaKnown RBP11.18□□□□□ -0.62
SSBP3-211ENST00000528787 GPRASP1Q5JY77 1395 aa11.18□□□□□ -0.62
SSBP3-211ENST00000528787 ABCC11Q96J66 1382 aa11.18□□□□□ -0.62
SSBP3-211ENST00000528787 SLC26A8Q96RN1 970 aa11.18□□□□□ -0.62
SSBP3-211ENST00000528787 DLC1Q96QB1 1528 aa11.18□□□□□ -0.62
SSBP3-211ENST00000528787 NWD1Q149M9 1564 aa11.17□□□□□ -0.62
SSBP3-211ENST00000528787 CFAP70Q5T0N1 1121 aa11.17□□□□□ -0.62
SSBP3-211ENST00000528787 TECPR2O15040 1411 aa11.17□□□□□ -0.62
SSBP3-211ENST00000528787 PTCH1Q13635 1447 aa11.17□□□□□ -0.62
SSBP3-211ENST00000528787 FAM135BQ49AJ0 1406 aa11.17□□□□□ -0.62
SSBP3-211ENST00000528787 YTHDC2Q9H6S0 1430 aaKnown RBP11.17□□□□□ -0.62
SSBP3-211ENST00000528787 CDCA8Q53HL2 280 aa11.15□□□□□ -0.62
SSBP3-211ENST00000528787 POGKQ9P215 609 aa11.15□□□□□ -0.62
SSBP3-211ENST00000528787 AMOTL2Q9Y2J4 779 aa11.15□□□□□ -0.62
SSBP3-211ENST00000528787 ADGRB1O14514 1584 aa11.15□□□□□ -0.62
SSBP3-211ENST00000528787 XRN1Q8IZH2 1706 aaKnown RBP11.15□□□□□ -0.63
SSBP3-211ENST00000528787 EIF4G2P78344 907 aaKnown RBP eCLIP11.14□□□□□ -0.638e-7■■■□□ 16.1
SSBP3-211ENST00000528787 METP08581 1390 aa11.14□□□□□ -0.63
SSBP3-211ENST00000528787 IQSEC2Q5JU85 1478 aa11.12□□□□□ -0.63
SSBP3-211ENST00000528787 NBPF8Q3BBV2 869 aa11.12□□□□□ -0.63
SSBP3-211ENST00000528787 SBNO2Q9Y2G9 1366 aa11.12□□□□□ -0.63
SSBP3-211ENST00000528787 CENPJQ9HC77 1338 aaPredicted RBP11.11□□□□□ -0.63
SSBP3-211ENST00000528787 C14orf37Q86TY3 774 aa11.11□□□□□ -0.63
SSBP3-211ENST00000528787 PROSER2Q86WR7 435 aaPredicted RBP11.11□□□□□ -0.63
SSBP3-211ENST00000528787 STK26Q9P289 416 aa11.11□□□□□ -0.63
SSBP3-211ENST00000528787 TRAK1Q9UPV9 953 aa11.11□□□□□ -0.63
SSBP3-211ENST00000528787 ARHGEF28Q8N1W1 1705 aaKnown RBP11.11□□□□□ -0.63
SSBP3-211ENST00000528787 USP47Q96K76 1375 aa11.11□□□□□ -0.63
SSBP3-211ENST00000528787 NBPF1Q3BBV0 1214 aa11.1□□□□□ -0.63
SSBP3-211ENST00000528787 TMEM132EQ6IEE7 984 aa11.1□□□□□ -0.63
SSBP3-211ENST00000528787 DCCP43146 1447 aa11.09□□□□□ -0.63
SSBP3-211ENST00000528787 MSH6P52701 1360 aa11.09□□□□□ -0.63
SSBP3-211ENST00000528787 ASXL1Q8IXJ9 1541 aa11.09□□□□□ -0.63
SSBP3-211ENST00000528787 EVC2Q86UK5 1308 aa11.09□□□□□ -0.63
SSBP3-211ENST00000528787 QRICH2Q9H0J4 1663 aa11.08□□□□□ -0.64
SSBP3-211ENST00000528787 TMF1P82094 1093 aa11.08□□□□□ -0.64
SSBP3-211ENST00000528787 CADPS2Q86UW7 1296 aa11.08□□□□□ -0.64
SSBP3-211ENST00000528787 PUS7Q96PZ0 661 aaKnown RBP11.08□□□□□ -0.64
SSBP3-211ENST00000528787 PRAM1Q96QH2 718 aa11.08□□□□□ -0.64
SSBP3-211ENST00000528787 C19orf44Q9H6X5 657 aa11.08□□□□□ -0.64
SSBP3-211ENST00000528787 ATF3P18847 181 aa11.07□□□□□ -0.64
SSBP3-211ENST00000528787 SENP3Q9H4L4 574 aaPredicted RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms