RNA–Protein interactions for RNA: ENST00000528729.1

FDFT1-213, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 3

Gene FDFT1, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-213ENST00000528729 CC2D2AQ9P2K1 1620 aa10.12□□□□□ -0.79
FDFT1-213ENST00000528729 PTGDRQ13258 359 aa10.12□□□□□ -0.79
FDFT1-213ENST00000528729 NOM1Q5C9Z4 860 aaKnown RBP10.12□□□□□ -0.79
FDFT1-213ENST00000528729 RIPOR2Q9Y4F9 1068 aa10.12□□□□□ -0.79
FDFT1-213ENST00000528729 EIF4G1Q04637 1599 aaKnown RBP10.12□□□□□ -0.79
FDFT1-213ENST00000528729 PALM3A6NDB9 673 aaPredicted RBP10.11□□□□□ -0.79
FDFT1-213ENST00000528729 PRR29P0C7W0 189 aa10.11□□□□□ -0.79
FDFT1-213ENST00000528729 FBXO31Q5XUX0 539 aaPredicted RBP10.11□□□□□ -0.79
FDFT1-213ENST00000528729 TMED8Q6PL24 325 aaPredicted RBP10.11□□□□□ -0.79
FDFT1-213ENST00000528729 LOC102724159A0A0B4J2E5 919 aa10.1□□□□□ -0.79
FDFT1-213ENST00000528729 LMOD1P29536 600 aaPredicted RBP10.1□□□□□ -0.79
FDFT1-213ENST00000528729 PWP2Q15269 919 aaKnown RBP10.1□□□□□ -0.79
FDFT1-213ENST00000528729 ZNF526Q8TF50 670 aaPredicted RBP10.1□□□□□ -0.79
FDFT1-213ENST00000528729 FAM217BQ9NTX9 383 aaPredicted RBP10.1□□□□□ -0.79
FDFT1-213ENST00000528729 ZNF326Q5BKZ1 582 aaKnown RBP10.09□□□□□ -0.79
FDFT1-213ENST00000528729 TBC1D2Q9BYX2 928 aa10.09□□□□□ -0.79
FDFT1-213ENST00000528729 PRDM16Q9HAZ2 1276 aa10.09□□□□□ -0.79
FDFT1-213ENST00000528729 WASHC4Q2M389 1173 aa10.08□□□□□ -0.8
FDFT1-213ENST00000528729 DSG3P32926 999 aa10.07□□□□□ -0.8
FDFT1-213ENST00000528729 DIXDC1Q155Q3 683 aa10.07□□□□□ -0.8
FDFT1-213ENST00000528729 DPH6Q7L8W6 267 aa10.07□□□□□ -0.8
FDFT1-213ENST00000528729 MICAL1Q8TDZ2 1067 aa10.07□□□□□ -0.8
FDFT1-213ENST00000528729 ZNF662Q6ZS27 426 aa10.06□□□□□ -0.8
FDFT1-213ENST00000528729 NOP9Q86U38 636 aaKnown RBP10.06□□□□□ -0.8
FDFT1-213ENST00000528729 TSPYL2Q9H2G4 693 aaPredicted RBP10.06□□□□□ -0.8
FDFT1-213ENST00000528729 RNF39Q9H2S5 420 aa10.06□□□□□ -0.8
FDFT1-213ENST00000528729 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.06□□□□□ -0.89e-26■□□□□ 11.3
FDFT1-213ENST00000528729 PPME1Q9Y570 386 aa10.06□□□□□ -0.8
FDFT1-213ENST00000528729 MYH16Q9H6N6 1097 aa10.05□□□□□ -0.8
FDFT1-213ENST00000528729 NPAS4Q8IUM7 802 aa10.04□□□□□ -0.8
FDFT1-213ENST00000528729 RECKO95980 971 aa10.03□□□□□ -0.8
FDFT1-213ENST00000528729 ARID4AP29374 1257 aaPredicted RBP10.03□□□□□ -0.8
FDFT1-213ENST00000528729 MARSP56192 900 aaKnown RBP10.03□□□□□ -0.8
FDFT1-213ENST00000528729 DSG2Q14126 1118 aa10.03□□□□□ -0.8
FDFT1-213ENST00000528729 PHOX2BQ99453 314 aa10.03□□□□□ -0.8
FDFT1-213ENST00000528729 SOWAHDA6NJG2 315 aa10.02□□□□□ -0.81
FDFT1-213ENST00000528729 PTGER2P43116 358 aa10.02□□□□□ -0.81
FDFT1-213ENST00000528729 C1QBPQ07021 282 aaKnown RBP10.02□□□□□ -0.81
FDFT1-213ENST00000528729 TUSC1Q2TAM9 212 aa10.02□□□□□ -0.81
FDFT1-213ENST00000528729 CDCA8Q53HL2 280 aa10.02□□□□□ -0.81
FDFT1-213ENST00000528729 EXOC8Q8IYI6 725 aa10.02□□□□□ -0.81
FDFT1-213ENST00000528729 TFIP11Q9UBB9 837 aaKnown RBP10.02□□□□□ -0.81
FDFT1-213ENST00000528729 LIMD1Q9UGP4 676 aa10.02□□□□□ -0.81
FDFT1-213ENST00000528729 NDUFB9Q9Y6M9 179 aa10.02□□□□□ -0.81
FDFT1-213ENST00000528729 RAB11FIP3O75154 756 aa10.01□□□□□ -0.81
FDFT1-213ENST00000528729 ELOAQ14241 798 aaKnown RBP10.01□□□□□ -0.81
FDFT1-213ENST00000528729 PHLDB3Q6NSJ2 640 aa10.01□□□□□ -0.81
FDFT1-213ENST00000528729 ALG2Q9H553 416 aa10.01□□□□□ -0.81
FDFT1-213ENST00000528729 TMA7Q9Y2S6 64 aaKnown RBP10.01□□□□□ -0.81
FDFT1-213ENST00000528729 SUGT1Q9Y2Z0 365 aa10.01□□□□□ -0.81
FDFT1-213ENST00000528729 ANKRD33BA6NCL7 494 aa10□□□□□ -0.81
FDFT1-213ENST00000528729 RBM46Q8TBY0 533 aaKnown RBP10□□□□□ -0.81
FDFT1-213ENST00000528729 UCN2Q96RP3 112 aa10□□□□□ -0.81
FDFT1-213ENST00000528729 TPD52L2O43399 206 aaKnown RBP9.99□□□□□ -0.81
FDFT1-213ENST00000528729 MAFBQ9Y5Q3 323 aaPredicted RBP9.99□□□□□ -0.81
FDFT1-213ENST00000528729 NEFLP07196 543 aa9.98□□□□□ -0.81
FDFT1-213ENST00000528729 GORABQ5T7V8 394 aa9.98□□□□□ -0.81
FDFT1-213ENST00000528729 IFNL1Q8IU54 200 aa9.98□□□□□ -0.81
FDFT1-213ENST00000528729 METTL14Q9HCE5 456 aaKnown RBP9.98□□□□□ -0.81
FDFT1-213ENST00000528729 RBM27Q9P2N5 1060 aaKnown RBP9.98□□□□□ -0.81
FDFT1-213ENST00000528729 ERCC5P28715 1186 aaPredicted RBP9.97□□□□□ -0.81
FDFT1-213ENST00000528729 MAP3K9P80192 1104 aa9.97□□□□□ -0.81
FDFT1-213ENST00000528729 CCDC181Q5TID7 509 aa9.97□□□□□ -0.81
FDFT1-213ENST00000528729 ZNF710Q8N1W2 664 aa9.97□□□□□ -0.81
FDFT1-213ENST00000528729 CUEDC1Q9NWM3 386 aaPredicted RBP9.97□□□□□ -0.81
FDFT1-213ENST00000528729 CLEC11AQ9Y240 323 aa9.97□□□□□ -0.81
FDFT1-213ENST00000528729 CCDC61Q9Y6R9 512 aa9.97□□□□□ -0.81
FDFT1-213ENST00000528729 C7P10643 843 aa9.96□□□□□ -0.82
FDFT1-213ENST00000528729 PRIM1P49642 420 aaKnown RBP9.96□□□□□ -0.82
FDFT1-213ENST00000528729 FOXK1P85037 733 aa9.96□□□□□ -0.82
FDFT1-213ENST00000528729 RIC3Q7Z5B4 369 aa9.96□□□□□ -0.82
FDFT1-213ENST00000528729 AP1G2O75843 785 aa9.95□□□□□ -0.82
FDFT1-213ENST00000528729 USP17L8P0C7I0 530 aa9.95□□□□□ -0.82
FDFT1-213ENST00000528729 TMEM164Q5U3C3 297 aa9.95□□□□□ -0.82
FDFT1-213ENST00000528729 GJD4Q96KN9 370 aaPredicted RBP9.95□□□□□ -0.82
FDFT1-213ENST00000528729 CDCA7Q9BWT1 371 aaPredicted RBP9.95□□□□□ -0.82
FDFT1-213ENST00000528729 BCL11AQ9H165 835 aa9.95□□□□□ -0.82
FDFT1-213ENST00000528729 SBNO2Q9Y2G9 1366 aa9.94□□□□□ -0.82
FDFT1-213ENST00000528729 SSFA2P28290 1259 aa9.94□□□□□ -0.82
FDFT1-213ENST00000528729 DDX12PQ92771 950 aa9.94□□□□□ -0.82
FDFT1-213ENST00000528729 L3MBTL3Q96JM7 780 aaPredicted RBP9.94□□□□□ -0.82
FDFT1-213ENST00000528729 NCAPD3P42695 1498 aa9.93□□□□□ -0.82
FDFT1-213ENST00000528729 TLDC2A0PJX2 215 aa9.93□□□□□ -0.82
FDFT1-213ENST00000528729 SOX11P35716 441 aa9.93□□□□□ -0.82
FDFT1-213ENST00000528729 IRX6P78412 446 aaPredicted RBP9.93□□□□□ -0.82
FDFT1-213ENST00000528729 VAC14Q08AM6 782 aa9.93□□□□□ -0.82
FDFT1-213ENST00000528729 FBXO33Q7Z6M2 555 aa9.93□□□□□ -0.82
FDFT1-213ENST00000528729 LNPKQ9C0E8 428 aa9.93□□□□□ -0.82
FDFT1-213ENST00000528729 SLC52A1Q9NWF4 448 aa9.93□□□□□ -0.82
FDFT1-213ENST00000528729 ZMIZ1Q9ULJ6 1067 aa9.93□□□□□ -0.82
FDFT1-213ENST00000528729 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.93□□□□□ -0.82
FDFT1-213ENST00000528729 FARP1Q9Y4F1 1045 aaPredicted RBP9.93□□□□□ -0.82
FDFT1-213ENST00000528729 LARGE2Q8N3Y3 721 aa9.92□□□□□ -0.82
FDFT1-213ENST00000528729 SPTLC1O15269 473 aa9.91□□□□□ -0.82
FDFT1-213ENST00000528729 FOSBP53539 338 aa9.91□□□□□ -0.82
FDFT1-213ENST00000528729 TSNAXIP1Q2TAA8 658 aa9.91□□□□□ -0.82
FDFT1-213ENST00000528729 GPR37L1O60883 481 aa9.9□□□□□ -0.82
FDFT1-213ENST00000528729 EGFLAMQ63HQ2 1017 aa9.9□□□□□ -0.82
FDFT1-213ENST00000528729 STK32AQ8WU08 396 aa9.9□□□□□ -0.82
FDFT1-213ENST00000528729 PIK3R5Q8WYR1 880 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 192.5 ms