RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 CHGAP10645 457 aaKnown RBP18.14■□□□□ 0.49
TRAPPC4-209ENST00000528230 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.14■□□□□ 0.49
TRAPPC4-209ENST00000528230 RIMS2Q9UQ26 1411 aa18.14■□□□□ 0.49
TRAPPC4-209ENST00000528230 SLC4A1APQ9BWU0 796 aaKnown RBP18.12■□□□□ 0.49
TRAPPC4-209ENST00000528230 PLEKHG1Q9ULL1 1385 aa18.11■□□□□ 0.49
TRAPPC4-209ENST00000528230 TRPM2O94759 1503 aa18.11■□□□□ 0.49
TRAPPC4-209ENST00000528230 UBAP1LF5GYI3 381 aa18.09■□□□□ 0.49
TRAPPC4-209ENST00000528230 PPP1R15AO75807 674 aaPredicted RBP18.09■□□□□ 0.49
TRAPPC4-209ENST00000528230 KIF1BO60333 1816 aa18.09■□□□□ 0.49
TRAPPC4-209ENST00000528230 LRRC7Q96NW7 1537 aa18.08■□□□□ 0.49
TRAPPC4-209ENST00000528230 SETD5Q9C0A6 1442 aa18.08■□□□□ 0.49
TRAPPC4-209ENST00000528230 KCNA6P17658 529 aa18.08■□□□□ 0.48
TRAPPC4-209ENST00000528230 BCANQ96GW7 911 aa18.08■□□□□ 0.48
TRAPPC4-209ENST00000528230 SLC26A8Q96RN1 970 aa18.08■□□□□ 0.48
TRAPPC4-209ENST00000528230 CLTCL1P53675 1640 aa18.07■□□□□ 0.48
TRAPPC4-209ENST00000528230 TOM1O60784 492 aa18.06■□□□□ 0.48
TRAPPC4-209ENST00000528230 TBX22Q9Y458 520 aa18.06■□□□□ 0.48
TRAPPC4-209ENST00000528230 MPHOSPH9Q99550 1183 aa18.05■□□□□ 0.48
TRAPPC4-209ENST00000528230 CHD2O14647 1828 aaKnown RBP18.04■□□□□ 0.48
TRAPPC4-209ENST00000528230 ZNF326Q5BKZ1 582 aaKnown RBP18.03■□□□□ 0.48
TRAPPC4-209ENST00000528230 XIRP1Q702N8 1843 aaKnown RBP18.02■□□□□ 0.48
TRAPPC4-209ENST00000528230 DIP2AQ14689 1571 aa18.02■□□□□ 0.48
TRAPPC4-209ENST00000528230 NUTM2DQ5VT03 806 aaPredicted RBP18.02■□□□□ 0.48
TRAPPC4-209ENST00000528230 NWD1Q149M9 1564 aa18.01■□□□□ 0.47
TRAPPC4-209ENST00000528230 ADAMTS13Q76LX8 1427 aa18.01■□□□□ 0.47
TRAPPC4-209ENST00000528230 PIK3R4Q99570 1358 aa18■□□□□ 0.47
TRAPPC4-209ENST00000528230 NKTRP30414 1462 aaKnown RBP18■□□□□ 0.47
TRAPPC4-209ENST00000528230 HRCP23327 699 aa17.99■□□□□ 0.47
TRAPPC4-209ENST00000528230 RAB3GAP2Q9H2M9 1393 aa17.99■□□□□ 0.47
TRAPPC4-209ENST00000528230 RPGRIP1LQ68CZ1 1315 aa17.98■□□□□ 0.47
TRAPPC4-209ENST00000528230 NEXMIFQ5QGS0 1516 aa17.98■□□□□ 0.47
TRAPPC4-209ENST00000528230 PROSER2Q86WR7 435 aaPredicted RBP17.98■□□□□ 0.47
TRAPPC4-209ENST00000528230 SETBP1Q9Y6X0 1596 aa17.97■□□□□ 0.47
TRAPPC4-209ENST00000528230 ALKQ9UM73 1620 aa17.97■□□□□ 0.47
TRAPPC4-209ENST00000528230 TMEM94Q12767 1356 aa17.96■□□□□ 0.47
TRAPPC4-209ENST00000528230 VGFO15240 615 aaPredicted RBP17.96■□□□□ 0.47
TRAPPC4-209ENST00000528230 NRXN3Q9Y4C0 1643 aa17.95■□□□□ 0.46
TRAPPC4-209ENST00000528230 CCDC144AA2RUR9 1427 aa17.95■□□□□ 0.46
TRAPPC4-209ENST00000528230 PIP4K2BP78356 416 aa17.94■□□□□ 0.46
TRAPPC4-209ENST00000528230 NCOA3Q9Y6Q9 1424 aa17.93■□□□□ 0.46
TRAPPC4-209ENST00000528230 PPLO60437 1756 aa17.92■□□□□ 0.46
TRAPPC4-209ENST00000528230 SCAF1Q9H7N4 1312 aaKnown RBP17.92■□□□□ 0.46
TRAPPC4-209ENST00000528230 AMOTL2Q9Y2J4 779 aa17.9■□□□□ 0.46
TRAPPC4-209ENST00000528230 SPATA31E1Q6ZUB1 1445 aa17.89■□□□□ 0.46
TRAPPC4-209ENST00000528230 PTPRUQ92729 1446 aa17.89■□□□□ 0.45
TRAPPC4-209ENST00000528230 RBM33Q96EV2 1170 aaKnown RBP17.88■□□□□ 0.45
TRAPPC4-209ENST00000528230 MSH6P52701 1360 aa17.88■□□□□ 0.45
TRAPPC4-209ENST00000528230 HSPA1LP34931 641 aa17.87■□□□□ 0.45
TRAPPC4-209ENST00000528230 METP08581 1390 aa17.87■□□□□ 0.45
TRAPPC4-209ENST00000528230 XRN1Q8IZH2 1706 aaKnown RBP17.86■□□□□ 0.45
TRAPPC4-209ENST00000528230 ANKRD30BQ9BXX2 1392 aa17.86■□□□□ 0.45
TRAPPC4-209ENST00000528230 RGL3Q3MIN7 710 aa17.85■□□□□ 0.45
TRAPPC4-209ENST00000528230 FAM135BQ49AJ0 1406 aa17.85■□□□□ 0.45
TRAPPC4-209ENST00000528230 IFT172Q9UG01 1749 aa17.85■□□□□ 0.45
TRAPPC4-209ENST00000528230 SETD1AO15047 1707 aaKnown RBP17.84■□□□□ 0.45
TRAPPC4-209ENST00000528230 C19orf44Q9H6X5 657 aa17.84■□□□□ 0.45
TRAPPC4-209ENST00000528230 C14orf37Q86TY3 774 aa17.82■□□□□ 0.44
TRAPPC4-209ENST00000528230 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.81■□□□□ 0.44
TRAPPC4-209ENST00000528230 SLAIN2Q9P270 581 aa17.81■□□□□ 0.44
TRAPPC4-209ENST00000528230 ADGRF5Q8IZF2 1346 aa17.8■□□□□ 0.44
TRAPPC4-209ENST00000528230 CADPS2Q86UW7 1296 aa17.8■□□□□ 0.44
TRAPPC4-209ENST00000528230 ROBO1Q9Y6N7 1651 aa17.78■□□□□ 0.44
TRAPPC4-209ENST00000528230 ATF3P18847 181 aa17.78■□□□□ 0.44
TRAPPC4-209ENST00000528230 PRAG1Q86YV5 1406 aa17.78■□□□□ 0.44
TRAPPC4-209ENST00000528230 DCCP43146 1447 aa17.77■□□□□ 0.44
TRAPPC4-209ENST00000528230 PTCH1Q13635 1447 aa17.76■□□□□ 0.43
TRAPPC4-209ENST00000528230 PIK3C2GO75747 1445 aa17.75■□□□□ 0.43
TRAPPC4-209ENST00000528230 MYOM2P54296 1465 aa17.75■□□□□ 0.43
TRAPPC4-209ENST00000528230 STAC3Q96MF2 364 aa17.74■□□□□ 0.43
TRAPPC4-209ENST00000528230 NRXN1Q9ULB1 1477 aa17.74■□□□□ 0.43
TRAPPC4-209ENST00000528230 C14orf93Q9H972 538 aaKnown RBP17.73■□□□□ 0.43
TRAPPC4-209ENST00000528230 DISP3Q9P2K9 1392 aa17.73■□□□□ 0.43
TRAPPC4-209ENST00000528230 ADGRL3Q9HAR2 1447 aa17.72■□□□□ 0.43
TRAPPC4-209ENST00000528230 ROBO2Q9HCK4 1378 aa17.72■□□□□ 0.43
TRAPPC4-209ENST00000528230 NALCNQ8IZF0 1738 aa17.71■□□□□ 0.43
TRAPPC4-209ENST00000528230 LRPPRCP42704 1394 aaKnown RBP17.7■□□□□ 0.42
TRAPPC4-209ENST00000528230 ABCC11Q96J66 1382 aa17.7■□□□□ 0.42
TRAPPC4-209ENST00000528230 LAMC1P11047 1609 aa17.7■□□□□ 0.42
TRAPPC4-209ENST00000528230 TECPR2O15040 1411 aa17.69■□□□□ 0.42
TRAPPC4-209ENST00000528230 PHLPP1O60346 1717 aa17.69■□□□□ 0.42
TRAPPC4-209ENST00000528230 KNDC1Q76NI1 1749 aa17.68■□□□□ 0.42
TRAPPC4-209ENST00000528230 SIRT1Q96EB6 747 aa17.68■□□□□ 0.42
TRAPPC4-209ENST00000528230 MST1RQ04912 1400 aa17.67■□□□□ 0.42
TRAPPC4-209ENST00000528230 TMEM132EQ6IEE7 984 aa17.67■□□□□ 0.42
TRAPPC4-209ENST00000528230 ASXL1Q8IXJ9 1541 aa17.67■□□□□ 0.42
TRAPPC4-209ENST00000528230 MED1Q15648 1581 aaPredicted RBP17.66■□□□□ 0.42
TRAPPC4-209ENST00000528230 YTHDC2Q9H6S0 1430 aaKnown RBP17.66■□□□□ 0.42
TRAPPC4-209ENST00000528230 CFAP70Q5T0N1 1121 aa17.66■□□□□ 0.42
TRAPPC4-209ENST00000528230 DCAF11Q8TEB1 546 aa17.66■□□□□ 0.42
TRAPPC4-209ENST00000528230 STK26Q9P289 416 aa17.66■□□□□ 0.42
TRAPPC4-209ENST00000528230 DHX57Q6P158 1386 aaKnown RBP17.66■□□□□ 0.42
TRAPPC4-209ENST00000528230 BRINP3Q76B58 766 aa17.65■□□□□ 0.42
TRAPPC4-209ENST00000528230 AHDC1Q5TGY3 1603 aaPredicted RBP17.65■□□□□ 0.42
TRAPPC4-209ENST00000528230 KDM2AQ9Y2K7 1162 aa17.64■□□□□ 0.41
TRAPPC4-209ENST00000528230 COL16A1Q07092 1604 aaPredicted RBP17.62■□□□□ 0.41
TRAPPC4-209ENST00000528230 TRIM26Q12899 539 aaPredicted RBP17.62■□□□□ 0.41
TRAPPC4-209ENST00000528230 WAPLQ7Z5K2 1190 aa17.62■□□□□ 0.41
TRAPPC4-209ENST00000528230 JCADQ9P266 1359 aa17.61■□□□□ 0.41
TRAPPC4-209ENST00000528230 C1orf167Q5SNV9 1468 aa17.61■□□□□ 0.41
TRAPPC4-209ENST00000528230 CDC42BPGQ6DT37 1551 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms