RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 STRCP1A6NGW2 1772 aa20.34■□□□□ 0.85
CAPN1-207ENST00000527189 KCNA6P17658 529 aa20.31■□□□□ 0.84
CAPN1-207ENST00000527189 E9PCH4 1651 aa20.31■□□□□ 0.84
CAPN1-207ENST00000527189 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.3■□□□□ 0.84
CAPN1-207ENST00000527189 ZFYVE9O95405 1425 aa20.29■□□□□ 0.84
CAPN1-207ENST00000527189 SLC26A8Q96RN1 970 aa20.29■□□□□ 0.84
CAPN1-207ENST00000527189 TMEM131LA2VDJ0 1609 aa20.28■□□□□ 0.84
CAPN1-207ENST00000527189 RIMS2Q9UQ26 1411 aa20.27■□□□□ 0.84
CAPN1-207ENST00000527189 PLEKHG1Q9ULL1 1385 aa20.27■□□□□ 0.84
CAPN1-207ENST00000527189 BCANQ96GW7 911 aa20.27■□□□□ 0.84
CAPN1-207ENST00000527189 SENP3Q9H4L4 574 aaPredicted RBP20.27■□□□□ 0.84
CAPN1-207ENST00000527189 PPP1R15AO75807 674 aaPredicted RBP20.26■□□□□ 0.83
CAPN1-207ENST00000527189 CHGAP10645 457 aaKnown RBP20.26■□□□□ 0.83
CAPN1-207ENST00000527189 NAIPQ13075 1403 aa20.26■□□□□ 0.83
CAPN1-207ENST00000527189 SETD1AO15047 1707 aaKnown RBP20.25■□□□□ 0.83
CAPN1-207ENST00000527189 TBX22Q9Y458 520 aa20.24■□□□□ 0.83
CAPN1-207ENST00000527189 PROSER2Q86WR7 435 aaPredicted RBP20.22■□□□□ 0.83
CAPN1-207ENST00000527189 MYO5BQ9ULV0 1848 aa20.21■□□□□ 0.83
CAPN1-207ENST00000527189 TMEM94Q12767 1356 aa20.21■□□□□ 0.83
CAPN1-207ENST00000527189 HFM1A2PYH4 1435 aa20.2■□□□□ 0.82
CAPN1-207ENST00000527189 NKTRP30414 1462 aaKnown RBP20.19■□□□□ 0.82
CAPN1-207ENST00000527189 XIRP1Q702N8 1843 aaKnown RBP20.18■□□□□ 0.82
CAPN1-207ENST00000527189 NWD1Q149M9 1564 aa20.17■□□□□ 0.82
CAPN1-207ENST00000527189 POTEAQ6S8J7 498 aa20.17■□□□□ 0.82
CAPN1-207ENST00000527189 PIK3R4Q99570 1358 aa20.17■□□□□ 0.82
CAPN1-207ENST00000527189 SRCAPQ6ZRS2 3230 aa20.17■□□□□ 0.82
CAPN1-207ENST00000527189 TRIM52Q96A61 297 aa20.15■□□□□ 0.82
CAPN1-207ENST00000527189 SPHKAPQ2M3C7 1700 aa20.15■□□□□ 0.82
CAPN1-207ENST00000527189 FAM135BQ49AJ0 1406 aa20.14■□□□□ 0.81
CAPN1-207ENST00000527189 ADAMTS13Q76LX8 1427 aa20.14■□□□□ 0.81
CAPN1-207ENST00000527189 NCOA3Q9Y6Q9 1424 aa20.14■□□□□ 0.81
CAPN1-207ENST00000527189 NUTM2DQ5VT03 806 aaPredicted RBP20.14■□□□□ 0.81
CAPN1-207ENST00000527189 CHD2O14647 1828 aaKnown RBP20.13■□□□□ 0.81
CAPN1-207ENST00000527189 DIP2AQ14689 1571 aa20.13■□□□□ 0.81
CAPN1-207ENST00000527189 MSH6P52701 1360 aa20.11■□□□□ 0.81
CAPN1-207ENST00000527189 ZNF326Q5BKZ1 582 aaKnown RBP20.11■□□□□ 0.81
CAPN1-207ENST00000527189 RBM33Q96EV2 1170 aaKnown RBP20.1■□□□□ 0.81
CAPN1-207ENST00000527189 SLC4A1APQ9BWU0 796 aaKnown RBP20.1■□□□□ 0.81
CAPN1-207ENST00000527189 TRPM2O94759 1503 aa20.1■□□□□ 0.81
CAPN1-207ENST00000527189 ACIN1Q9UKV3 1341 aaKnown RBP20.09■□□□□ 0.81
CAPN1-207ENST00000527189 SLAIN2Q9P270 581 aa20.06■□□□□ 0.8
CAPN1-207ENST00000527189 AMOTL2Q9Y2J4 779 aa20.06■□□□□ 0.8
CAPN1-207ENST00000527189 SETBP1Q9Y6X0 1596 aa20.05■□□□□ 0.8
CAPN1-207ENST00000527189 C19orf44Q9H6X5 657 aa20.05■□□□□ 0.8
CAPN1-207ENST00000527189 CLTCL1P53675 1640 aa20.05■□□□□ 0.8
CAPN1-207ENST00000527189 RPGRIP1LQ68CZ1 1315 aa20.03■□□□□ 0.8
CAPN1-207ENST00000527189 VGFO15240 615 aaPredicted RBP20.03■□□□□ 0.8
CAPN1-207ENST00000527189 KIF1BO60333 1816 aa20.02■□□□□ 0.8
CAPN1-207ENST00000527189 C14orf37Q86TY3 774 aa20.02■□□□□ 0.8
CAPN1-207ENST00000527189 CADPS2Q86UW7 1296 aa20.02■□□□□ 0.8
CAPN1-207ENST00000527189 NEXMIFQ5QGS0 1516 aa20.01■□□□□ 0.79
CAPN1-207ENST00000527189 PTPRUQ92729 1446 aa20.01■□□□□ 0.79
CAPN1-207ENST00000527189 ROBO1Q9Y6N7 1651 aa20■□□□□ 0.79
CAPN1-207ENST00000527189 NRXN3Q9Y4C0 1643 aa19.99■□□□□ 0.79
CAPN1-207ENST00000527189 ATF3P18847 181 aa19.99■□□□□ 0.79
CAPN1-207ENST00000527189 MPHOSPH9Q99550 1183 aa19.98■□□□□ 0.79
CAPN1-207ENST00000527189 METP08581 1390 aa19.97■□□□□ 0.79
CAPN1-207ENST00000527189 DCCP43146 1447 aa19.93■□□□□ 0.78
CAPN1-207ENST00000527189 XRN1Q8IZH2 1706 aaKnown RBP19.93■□□□□ 0.78
CAPN1-207ENST00000527189 FOXD1Q16676 465 aa19.93■□□□□ 0.78
CAPN1-207ENST00000527189 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.93■□□□□ 0.78
CAPN1-207ENST00000527189 CCDC144AA2RUR9 1427 aa19.93■□□□□ 0.78
CAPN1-207ENST00000527189 SETD5Q9C0A6 1442 aa19.93■□□□□ 0.78
CAPN1-207ENST00000527189 UPF1Q92900 1129 aaKnown RBP eCLIP19.9■□□□□ 0.78
CAPN1-207ENST00000527189 PHLPP1O60346 1717 aa19.88■□□□□ 0.77
CAPN1-207ENST00000527189 JCADQ9P266 1359 aa19.88■□□□□ 0.77
CAPN1-207ENST00000527189 ANKRD30BQ9BXX2 1392 aa19.87■□□□□ 0.77
CAPN1-207ENST00000527189 SPATA31E1Q6ZUB1 1445 aa19.86■□□□□ 0.77
CAPN1-207ENST00000527189 PPLO60437 1756 aa19.86■□□□□ 0.77
CAPN1-207ENST00000527189 PTCH1Q13635 1447 aa19.85■□□□□ 0.77
CAPN1-207ENST00000527189 PRAG1Q86YV5 1406 aa19.85■□□□□ 0.77
CAPN1-207ENST00000527189 ADGRL3Q9HAR2 1447 aa19.85■□□□□ 0.77
CAPN1-207ENST00000527189 RGL3Q3MIN7 710 aa19.85■□□□□ 0.77
CAPN1-207ENST00000527189 BRINP3Q76B58 766 aa19.85■□□□□ 0.77
CAPN1-207ENST00000527189 HRCP23327 699 aa19.83■□□□□ 0.77
CAPN1-207ENST00000527189 AHDC1Q5TGY3 1603 aaPredicted RBP19.83■□□□□ 0.76
CAPN1-207ENST00000527189 RAB3GAP2Q9H2M9 1393 aa19.83■□□□□ 0.76
CAPN1-207ENST00000527189 ADGRF5Q8IZF2 1346 aa19.82■□□□□ 0.76
CAPN1-207ENST00000527189 LRP6O75581 1613 aa19.82■□□□□ 0.76
CAPN1-207ENST00000527189 MST1RQ04912 1400 aa19.82■□□□□ 0.76
CAPN1-207ENST00000527189 SPATA31A6Q5VVP1 1343 aa19.81■□□□□ 0.76
CAPN1-207ENST00000527189 COL16A1Q07092 1604 aaPredicted RBP19.81■□□□□ 0.76
CAPN1-207ENST00000527189 ROBO2Q9HCK4 1378 aa19.81■□□□□ 0.76
CAPN1-207ENST00000527189 ASXL1Q8IXJ9 1541 aa19.76■□□□□ 0.75
CAPN1-207ENST00000527189 LRRC59Q96AG4 307 aaKnown RBP19.76■□□□□ 0.75
CAPN1-207ENST00000527189 NALCNQ8IZF0 1738 aa19.75■□□□□ 0.75
CAPN1-207ENST00000527189 PIK3C2GO75747 1445 aa19.75■□□□□ 0.75
CAPN1-207ENST00000527189 C1orf167Q5SNV9 1468 aa19.74■□□□□ 0.75
CAPN1-207ENST00000527189 IFT172Q9UG01 1749 aa19.74■□□□□ 0.75
CAPN1-207ENST00000527189 ABCC11Q96J66 1382 aa19.74■□□□□ 0.75
CAPN1-207ENST00000527189 LRPPRCP42704 1394 aaKnown RBP19.73■□□□□ 0.75
CAPN1-207ENST00000527189 C14orf93Q9H972 538 aaKnown RBP19.73■□□□□ 0.75
CAPN1-207ENST00000527189 TECPR2O15040 1411 aa19.73■□□□□ 0.75
CAPN1-207ENST00000527189 SHPRHQ149N8 1683 aa19.72■□□□□ 0.75
CAPN1-207ENST00000527189 SIRT1Q96EB6 747 aa19.72■□□□□ 0.75
CAPN1-207ENST00000527189 NHSL1Q5SYE7 1610 aa19.7■□□□□ 0.74
CAPN1-207ENST00000527189 TMEM132EQ6IEE7 984 aa19.7■□□□□ 0.74
CAPN1-207ENST00000527189 STAC3Q96MF2 364 aa19.7■□□□□ 0.74
CAPN1-207ENST00000527189 STK26Q9P289 416 aa19.7■□□□□ 0.74
CAPN1-207ENST00000527189 MYOM2P54296 1465 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms