RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 ADGRB3O60242 1522 aa17.22■□□□□ 0.35
NEDD8-204ENST00000526430 SLC26A8Q96RN1 970 aa17.22■□□□□ 0.35
NEDD8-204ENST00000526430 MYO5BQ9ULV0 1848 aa17.21■□□□□ 0.35
NEDD8-204ENST00000526430 RGS12O14924 1447 aa17.2■□□□□ 0.34
NEDD8-204ENST00000526430 CROCC2H7BZ55 1655 aa17.18■□□□□ 0.34
NEDD8-204ENST00000526430 STAG3Q9UJ98 1225 aa17.18■□□□□ 0.34
NEDD8-204ENST00000526430 ERBINQ96RT1 1412 aa17.17■□□□□ 0.34
NEDD8-204ENST00000526430 LMTK2Q8IWU2 1503 aa17.16■□□□□ 0.34
NEDD8-204ENST00000526430 NHSL1Q5SYE7 1610 aa17.16■□□□□ 0.34
NEDD8-204ENST00000526430 AFF2P51816 1311 aa17.15■□□□□ 0.34
NEDD8-204ENST00000526430 IDI1Q13907 227 aa17.14■□□□□ 0.33
NEDD8-204ENST00000526430 FOXD1Q16676 465 aa17.13■□□□□ 0.33
NEDD8-204ENST00000526430 EP400Q96L91 3159 aa17.13■□□□□ 0.33
NEDD8-204ENST00000526430 CADPS2Q86UW7 1296 aa17.12■□□□□ 0.33
NEDD8-204ENST00000526430 GCC2Q8IWJ2 1684 aa17.12■□□□□ 0.33
NEDD8-204ENST00000526430 PLEKHG1Q9ULL1 1385 aa17.12■□□□□ 0.33
NEDD8-204ENST00000526430 ZFYVE9O95405 1425 aa17.12■□□□□ 0.33
NEDD8-204ENST00000526430 NOS1P29475 1434 aa17.12■□□□□ 0.33
NEDD8-204ENST00000526430 SETBP1Q9Y6X0 1596 aa17.11■□□□□ 0.33
NEDD8-204ENST00000526430 RBM6P78332 1123 aaKnown RBP17.11■□□□□ 0.33
NEDD8-204ENST00000526430 ATAD2Q6PL18 1390 aa17.11■□□□□ 0.33
NEDD8-204ENST00000526430 SETD5Q9C0A6 1442 aa17.11■□□□□ 0.33
NEDD8-204ENST00000526430 ZRANB1Q9UGI0 708 aa17.1■□□□□ 0.33
NEDD8-204ENST00000526430 KANK1Q14678 1352 aa17.09■□□□□ 0.33
NEDD8-204ENST00000526430 KIF15Q9NS87 1388 aa17.09■□□□□ 0.33
NEDD8-204ENST00000526430 ASXL1Q8IXJ9 1541 aa17.08■□□□□ 0.32
NEDD8-204ENST00000526430 MYOM3Q5VTT5 1437 aa17.08■□□□□ 0.32
NEDD8-204ENST00000526430 C19orf44Q9H6X5 657 aa17.08■□□□□ 0.32
NEDD8-204ENST00000526430 DCCP43146 1447 aa17.07■□□□□ 0.32
NEDD8-204ENST00000526430 NUTM2BA6NNL0 878 aaPredicted RBP17.07■□□□□ 0.32
NEDD8-204ENST00000526430 NUTM2EB1AL46 878 aaPredicted RBP17.07■□□□□ 0.32
NEDD8-204ENST00000526430 KANK4Q5T7N3 995 aaPredicted RBP17.07■□□□□ 0.32
NEDD8-204ENST00000526430 NUTM2AQ8IVF1 878 aaPredicted RBP17.07■□□□□ 0.32
NEDD8-204ENST00000526430 TMEM131LA2VDJ0 1609 aa17.07■□□□□ 0.32
NEDD8-204ENST00000526430 ATF3P18847 181 aa17.06■□□□□ 0.32
NEDD8-204ENST00000526430 NUTM2DQ5VT03 806 aaPredicted RBP17.06■□□□□ 0.32
NEDD8-204ENST00000526430 QTRT2Q9H974 415 aaKnown RBP17.06■□□□□ 0.32
NEDD8-204ENST00000526430 SLC52A1Q9NWF4 448 aa17.06■□□□□ 0.32
NEDD8-204ENST00000526430 PIK3R4Q99570 1358 aa17.05■□□□□ 0.32
NEDD8-204ENST00000526430 BRINP3Q76B58 766 aa17.05■□□□□ 0.32
NEDD8-204ENST00000526430 BCANQ96GW7 911 aa17.05■□□□□ 0.32
NEDD8-204ENST00000526430 TBX22Q9Y458 520 aa17.05■□□□□ 0.32
NEDD8-204ENST00000526430 LRP5O75197 1615 aa17.05■□□□□ 0.32
NEDD8-204ENST00000526430 C14orf37Q86TY3 774 aa17.04■□□□□ 0.32
NEDD8-204ENST00000526430 NGLY1Q96IV0 654 aa17.03■□□□□ 0.32
NEDD8-204ENST00000526430 RPRD2Q5VT52 1461 aaKnown RBP17.03■□□□□ 0.32
NEDD8-204ENST00000526430 RIMS2Q9UQ26 1411 aa17.03■□□□□ 0.32
NEDD8-204ENST00000526430 LAMC1P11047 1609 aa17.01■□□□□ 0.31
NEDD8-204ENST00000526430 HDGFP51858 240 aaKnown RBP17.01■□□□□ 0.31
NEDD8-204ENST00000526430 ADAMTS13Q76LX8 1427 aa17.01■□□□□ 0.31
NEDD8-204ENST00000526430 TRPM2O94759 1503 aa17.01■□□□□ 0.31
NEDD8-204ENST00000526430 XRN1Q8IZH2 1706 aaKnown RBP17■□□□□ 0.31
NEDD8-204ENST00000526430 LRRC59Q96AG4 307 aaKnown RBP17■□□□□ 0.31
NEDD8-204ENST00000526430 C8orf37Q96NL8 207 aa17■□□□□ 0.31
NEDD8-204ENST00000526430 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17■□□□□ 0.311e-7■■■□□ 14.9
NEDD8-204ENST00000526430 PNPLA6Q8IY17 1366 aa17■□□□□ 0.31
NEDD8-204ENST00000526430 CCDC125Q86Z20 511 aa16.99■□□□□ 0.31
NEDD8-204ENST00000526430 MST1RQ04912 1400 aa16.98■□□□□ 0.31
NEDD8-204ENST00000526430 PPP1R15AO75807 674 aaPredicted RBP16.98■□□□□ 0.31
NEDD8-204ENST00000526430 MARF1Q9Y4F3 1742 aaKnown RBP16.97■□□□□ 0.31
NEDD8-204ENST00000526430 ABCC5O15440 1437 aa16.96■□□□□ 0.31
NEDD8-204ENST00000526430 UNC13BO14795 1591 aa16.95■□□□□ 0.3
NEDD8-204ENST00000526430 RRP7BPQ9NSQ0 103 aa16.95■□□□□ 0.3
NEDD8-204ENST00000526430 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.94■□□□□ 0.3
NEDD8-204ENST00000526430 PTPN23Q9H3S7 1636 aa16.94■□□□□ 0.3
NEDD8-204ENST00000526430 COL22A1Q8NFW1 1626 aaPredicted RBP16.93■□□□□ 0.3
NEDD8-204ENST00000526430 NALCNQ8IZF0 1738 aa16.93■□□□□ 0.3
NEDD8-204ENST00000526430 TRPC5Q9UL62 973 aaPredicted RBP16.92■□□□□ 0.3
NEDD8-204ENST00000526430 ATRNO75882 1429 aa16.92■□□□□ 0.3
NEDD8-204ENST00000526430 DAPK1P53355 1430 aa16.92■□□□□ 0.3
NEDD8-204ENST00000526430 PTPRUQ92729 1446 aa16.92■□□□□ 0.3
NEDD8-204ENST00000526430 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.91■□□□□ 0.3
NEDD8-204ENST00000526430 PTCH1Q13635 1447 aa16.91■□□□□ 0.3
NEDD8-204ENST00000526430 NRXN3Q9Y4C0 1643 aa16.91■□□□□ 0.3
NEDD8-204ENST00000526430 SPHKAPQ2M3C7 1700 aa16.9■□□□□ 0.3
NEDD8-204ENST00000526430 APLP2Q06481 763 aa16.89■□□□□ 0.29
NEDD8-204ENST00000526430 USP21Q9UK80 565 aa16.89■□□□□ 0.29
NEDD8-204ENST00000526430 ANKRD30AQ9BXX3 1397 aa16.89■□□□□ 0.29
NEDD8-204ENST00000526430 PPARGC1BQ86YN6 1023 aaKnown RBP16.88■□□□□ 0.29
NEDD8-204ENST00000526430 FNBP4Q8N3X1 1017 aaPredicted RBP16.88■□□□□ 0.29
NEDD8-204ENST00000526430 AMOTL2Q9Y2J4 779 aa16.88■□□□□ 0.29
NEDD8-204ENST00000526430 BRWD3Q6RI45 1802 aa16.88■□□□□ 0.29
NEDD8-204ENST00000526430 IQGAP3Q86VI3 1631 aa16.87■□□□□ 0.29
NEDD8-204ENST00000526430 E9PCH4 1651 aa16.87■□□□□ 0.29
NEDD8-204ENST00000526430 ADGRL3Q9HAR2 1447 aa16.87■□□□□ 0.29
NEDD8-204ENST00000526430 ADAMTS2O95450 1211 aa16.86■□□□□ 0.29
NEDD8-204ENST00000526430 BLMP54132 1417 aaPredicted RBP16.86■□□□□ 0.29
NEDD8-204ENST00000526430 ADGRL2O95490 1459 aa16.83■□□□□ 0.28
NEDD8-204ENST00000526430 DDX17Q92841 729 aaKnown RBP16.83■□□□□ 0.28
NEDD8-204ENST00000526430 BCL9LQ86UU0 1499 aa16.81■□□□□ 0.28
NEDD8-204ENST00000526430 SOS2Q07890 1332 aaPredicted RBP16.81■□□□□ 0.28
NEDD8-204ENST00000526430 MYOM2P54296 1465 aa16.8■□□□□ 0.28
NEDD8-204ENST00000526430 C1orf167Q5SNV9 1468 aa16.8■□□□□ 0.28
NEDD8-204ENST00000526430 GLI3P10071 1580 aa16.78■□□□□ 0.28
NEDD8-204ENST00000526430 CHGAP10645 457 aaKnown RBP16.76■□□□□ 0.27
NEDD8-204ENST00000526430 GJD4Q96KN9 370 aaPredicted RBP16.76■□□□□ 0.27
NEDD8-204ENST00000526430 ANKRD50Q9ULJ7 1429 aa16.76■□□□□ 0.27
NEDD8-204ENST00000526430 CHIC2Q9UKJ5 165 aa16.74■□□□□ 0.27
NEDD8-204ENST00000526430 METP08581 1390 aa16.73■□□□□ 0.27
NEDD8-204ENST00000526430 DEFB132Q7Z7B7 95 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms