RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 JPH4Q96JJ6 628 aa6.57□□□□□ -1.36
CSDE1-209ENST00000525132 ARIH1Q9Y4X5 557 aaPredicted RBP6.57□□□□□ -1.36
CSDE1-209ENST00000525132 TTC37Q6PGP7 1564 aa6.57□□□□□ -1.36
CSDE1-209ENST00000525132 PEG3Q9GZU2 1588 aa6.57□□□□□ -1.36
CSDE1-209ENST00000525132 RAPGEF3O95398 923 aa6.56□□□□□ -1.36
CSDE1-209ENST00000525132 CCDC125Q86Z20 511 aa6.56□□□□□ -1.36
CSDE1-209ENST00000525132 TMC2Q8TDI7 906 aa6.56□□□□□ -1.36
CSDE1-209ENST00000525132 DCAF1Q9Y4B6 1507 aa6.55□□□□□ -1.36
CSDE1-209ENST00000525132 PLPP6Q8IY26 295 aa6.55□□□□□ -1.36
CSDE1-209ENST00000525132 VSIG10Q8N0Z9 540 aa6.55□□□□□ -1.36
CSDE1-209ENST00000525132 OXER1Q8TDS5 423 aa6.55□□□□□ -1.36
CSDE1-209ENST00000525132 DDX27Q96GQ7 796 aaKnown RBP6.55□□□□□ -1.36
CSDE1-209ENST00000525132 LARP6Q9BRS8 491 aaKnown RBP6.55□□□□□ -1.36
CSDE1-209ENST00000525132 EMILIN3Q9NT22 766 aa6.55□□□□□ -1.36
CSDE1-209ENST00000525132 UTRNP46939 3433 aa6.54□□□□□ -1.36
CSDE1-209ENST00000525132 NUP160Q12769 1436 aa6.54□□□□□ -1.36
CSDE1-209ENST00000525132 HAP1P54257 671 aaPredicted RBP6.54□□□□□ -1.36
CSDE1-209ENST00000525132 DNAJC5GQ8N7S2 189 aa6.54□□□□□ -1.36
CSDE1-209ENST00000525132 PTCD2Q8WV60 388 aaKnown RBP6.54□□□□□ -1.36
CSDE1-209ENST00000525132 BCL9LQ86UU0 1499 aa6.53□□□□□ -1.36
CSDE1-209ENST00000525132 GPR153Q6NV75 609 aa6.53□□□□□ -1.36
CSDE1-209ENST00000525132 DEFB132Q7Z7B7 95 aa6.53□□□□□ -1.36
CSDE1-209ENST00000525132 POLA1P09884 1462 aaPredicted RBP6.53□□□□□ -1.36
CSDE1-209ENST00000525132 CPS1P31327 1500 aa6.52□□□□□ -1.37
CSDE1-209ENST00000525132 MEX3CQ5U5Q3 659 aaKnown RBP6.52□□□□□ -1.37
CSDE1-209ENST00000525132 CAMTA1Q9Y6Y1 1673 aa6.52□□□□□ -1.37
CSDE1-209ENST00000525132 SOGA1O94964 1423 aa6.51□□□□□ -1.37
CSDE1-209ENST00000525132 RUSC2Q8N2Y8 1516 aa6.51□□□□□ -1.37
CSDE1-209ENST00000525132 KCNV2Q8TDN2 545 aa6.51□□□□□ -1.37
CSDE1-209ENST00000525132 ZSWIM6Q9HCJ5 1215 aa6.51□□□□□ -1.37
CSDE1-209ENST00000525132 CAMSAP1Q5T5Y3 1602 aa6.5□□□□□ -1.37
CSDE1-209ENST00000525132 FER1L4A9Z1Z3 1794 aa6.5□□□□□ -1.37
CSDE1-209ENST00000525132 ABCC8Q09428 1581 aa6.5□□□□□ -1.37
CSDE1-209ENST00000525132 GRIN2AQ12879 1464 aa6.5□□□□□ -1.37
CSDE1-209ENST00000525132 MLLT1Q03111 559 aaPredicted RBP6.5□□□□□ -1.37
CSDE1-209ENST00000525132 POGZQ7Z3K3 1410 aa6.5□□□□□ -1.37
CSDE1-209ENST00000525132 SHANK2Q9UPX8 1470 aa6.49□□□□□ -1.37
CSDE1-209ENST00000525132 MAGI3Q5TCQ9 1506 aa6.49□□□□□ -1.37
CSDE1-209ENST00000525132 ARAP3Q8WWN8 1544 aa6.49□□□□□ -1.37
CSDE1-209ENST00000525132 HOXB1P14653 301 aaPredicted RBP6.48□□□□□ -1.37
CSDE1-209ENST00000525132 E2F4Q16254 413 aa6.48□□□□□ -1.37
CSDE1-209ENST00000525132 DOK7Q18PE1 504 aa6.48□□□□□ -1.37
CSDE1-209ENST00000525132 MYT1LQ9UL68 1186 aa6.48□□□□□ -1.37
CSDE1-209ENST00000525132 CD109Q6YHK3 1445 aa6.48□□□□□ -1.37
CSDE1-209ENST00000525132 SETD1BQ9UPS6 1966 aaKnown RBP6.48□□□□□ -1.37
CSDE1-209ENST00000525132 LRP6O75581 1613 aa6.47□□□□□ -1.37
CSDE1-209ENST00000525132 ABCC2Q92887 1545 aa6.47□□□□□ -1.37
CSDE1-209ENST00000525132 PCDHGA4Q9Y5G9 962 aa6.47□□□□□ -1.37
CSDE1-209ENST00000525132 EP400Q96L91 3159 aa6.47□□□□□ -1.37
CSDE1-209ENST00000525132 DNMBPQ6XZF7 1577 aa6.47□□□□□ -1.37
CSDE1-209ENST00000525132 RBM6P78332 1123 aaKnown RBP6.46□□□□□ -1.38
CSDE1-209ENST00000525132 PDIA6Q15084 440 aa6.46□□□□□ -1.38
CSDE1-209ENST00000525132 ANO8Q9HCE9 1232 aaPredicted RBP6.46□□□□□ -1.38
CSDE1-209ENST00000525132 TTBK1Q5TCY1 1321 aaPredicted RBP6.46□□□□□ -1.38
CSDE1-209ENST00000525132 R3HDM1Q15032 1099 aaKnown RBP6.44□□□□□ -1.38
CSDE1-209ENST00000525132 ARHGEF1Q92888 912 aaKnown RBP6.44□□□□□ -1.38
CSDE1-209ENST00000525132 KHSRPQ92945 711 aaKnown RBP eCLIP6.44□□□□□ -1.383e-7■■■■□ 20
CSDE1-209ENST00000525132 QTRT2Q9H974 415 aaKnown RBP6.44□□□□□ -1.38
CSDE1-209ENST00000525132 CUL7Q14999 1698 aa6.44□□□□□ -1.38
CSDE1-209ENST00000525132 SIGLEC1Q9BZZ2 1709 aa6.43□□□□□ -1.38
CSDE1-209ENST00000525132 DPYSL4O14531 572 aa6.43□□□□□ -1.38
CSDE1-209ENST00000525132 ARSIQ5FYB1 569 aa6.43□□□□□ -1.38
CSDE1-209ENST00000525132 WDR97A6NE52 1622 aa6.43□□□□□ -1.38
CSDE1-209ENST00000525132 PTGER2P43116 358 aa6.42□□□□□ -1.38
CSDE1-209ENST00000525132 AATKQ6ZMQ8 1374 aa6.42□□□□□ -1.38
CSDE1-209ENST00000525132 RTEL1-TNFRSF6BF6WH68 1400 aa6.42□□□□□ -1.38
CSDE1-209ENST00000525132 FANCAO15360 1455 aa6.41□□□□□ -1.38
CSDE1-209ENST00000525132 P3H3Q8IVL6 736 aa6.41□□□□□ -1.38
CSDE1-209ENST00000525132 PLA2G2EQ9NZK7 142 aa6.41□□□□□ -1.38
CSDE1-209ENST00000525132 AFF2P51816 1311 aa6.41□□□□□ -1.38
CSDE1-209ENST00000525132 JCADQ9P266 1359 aa6.41□□□□□ -1.38
CSDE1-209ENST00000525132 FHOD3Q2V2M9 1422 aa6.41□□□□□ -1.38
CSDE1-209ENST00000525132 RIMBP2O15034 1052 aa6.4□□□□□ -1.38
CSDE1-209ENST00000525132 WDR70Q9NW82 654 aa6.4□□□□□ -1.38
CSDE1-209ENST00000525132 PPP1R1BQ9UD71 204 aaPredicted RBP6.4□□□□□ -1.38
CSDE1-209ENST00000525132 CACNA1AO00555 2505 aa6.4□□□□□ -1.39
CSDE1-209ENST00000525132 FAM135BQ49AJ0 1406 aa6.4□□□□□ -1.39
CSDE1-209ENST00000525132 KIAA1210Q9ULL0 1709 aa6.39□□□□□ -1.39
CSDE1-209ENST00000525132 CHD4Q14839 1912 aa6.39□□□□□ -1.39
CSDE1-209ENST00000525132 NUDT7P0C024 238 aa6.39□□□□□ -1.39
CSDE1-209ENST00000525132 APLP1P51693 650 aa6.39□□□□□ -1.39
CSDE1-209ENST00000525132 JMYQ8N9B5 988 aa6.39□□□□□ -1.39
CSDE1-209ENST00000525132 IRX2Q9BZI1 471 aaPredicted RBP6.39□□□□□ -1.39
CSDE1-209ENST00000525132 PBRM1Q86U86 1689 aa6.39□□□□□ -1.39
CSDE1-209ENST00000525132 SPDYE16A6NNV3 312 aaPredicted RBP6.38□□□□□ -1.39
CSDE1-209ENST00000525132 EVI5O60447 810 aa6.38□□□□□ -1.39
CSDE1-209ENST00000525132 IGSF5Q9NSI5 407 aa6.38□□□□□ -1.39
CSDE1-209ENST00000525132 NINLQ9Y2I6 1382 aa6.38□□□□□ -1.39
CSDE1-209ENST00000525132 BLMP54132 1417 aaPredicted RBP6.37□□□□□ -1.39
CSDE1-209ENST00000525132 ZNF316A6NFI3 1004 aaPredicted RBP6.37□□□□□ -1.39
CSDE1-209ENST00000525132 PRIM1P49642 420 aaKnown RBP6.37□□□□□ -1.39
CSDE1-209ENST00000525132 FOSBP53539 338 aa6.37□□□□□ -1.39
CSDE1-209ENST00000525132 ZNF710Q8N1W2 664 aa6.37□□□□□ -1.39
CSDE1-209ENST00000525132 KCNH8Q96L42 1107 aa6.37□□□□□ -1.39
CSDE1-209ENST00000525132 LHX6Q9UPM6 363 aa6.37□□□□□ -1.39
CSDE1-209ENST00000525132 NWD1Q149M9 1564 aa6.36□□□□□ -1.39
CSDE1-209ENST00000525132 VWDEQ8N2E2 1590 aa6.36□□□□□ -1.39
CSDE1-209ENST00000525132 TESPA1A2RU30 521 aaPredicted RBP6.36□□□□□ -1.39
CSDE1-209ENST00000525132 TBC1D12O60347 775 aa6.36□□□□□ -1.39
CSDE1-209ENST00000525132 RGS19P49795 217 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms