RNA–Protein interactions for RNA: ENST00000524630.5

CTNND1-210, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CTNND1, Length 6,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-210ENST00000524630 EVC2Q86UK5 1308 aa12.41□□□□□ -0.42
CTNND1-210ENST00000524630 WASHC2AQ641Q2 1341 aa12.41□□□□□ -0.42
CTNND1-210ENST00000524630 RASSF8Q8NHQ8 419 aa12.41□□□□□ -0.42
CTNND1-210ENST00000524630 GPS2Q13227 327 aa12.41□□□□□ -0.42
CTNND1-210ENST00000524630 BECN2A8MW95 431 aa12.4□□□□□ -0.42
CTNND1-210ENST00000524630 C22orf23Q9BZE7 217 aa12.4□□□□□ -0.42
CTNND1-210ENST00000524630 REC8O95072 547 aa12.4□□□□□ -0.42
CTNND1-210ENST00000524630 NGDNQ8NEJ9 315 aaKnown RBP12.4□□□□□ -0.42
CTNND1-210ENST00000524630 MYOM3Q5VTT5 1437 aa12.4□□□□□ -0.42
CTNND1-210ENST00000524630 NASPP49321 788 aaPredicted RBP12.4□□□□□ -0.42
CTNND1-210ENST00000524630 CCDC9Q9Y3X0 531 aaKnown RBP12.4□□□□□ -0.42
CTNND1-210ENST00000524630 RUNDC1Q96C34 613 aa12.39□□□□□ -0.43
CTNND1-210ENST00000524630 CCDC39Q9UFE4 941 aa12.39□□□□□ -0.43
CTNND1-210ENST00000524630 PRKCSHP14314 528 aaPredicted RBP12.39□□□□□ -0.43
CTNND1-210ENST00000524630 ANO2Q9NQ90 1003 aa12.39□□□□□ -0.43
CTNND1-210ENST00000524630 PANK1Q8TE04 598 aa12.38□□□□□ -0.43
CTNND1-210ENST00000524630 BCL11BQ9C0K0 894 aaPredicted RBP12.38□□□□□ -0.43
CTNND1-210ENST00000524630 BRD4O60885 1362 aaPredicted RBP12.38□□□□□ -0.43
CTNND1-210ENST00000524630 DIAPH3Q9NSV4 1193 aa12.38□□□□□ -0.43
CTNND1-210ENST00000524630 FANCD2Q9BXW9 1451 aa12.38□□□□□ -0.43
CTNND1-210ENST00000524630 RIPK4P57078 832 aa12.38□□□□□ -0.43
CTNND1-210ENST00000524630 RBM10P98175 930 aaKnown RBP12.38□□□□□ -0.43
CTNND1-210ENST00000524630 TRAK2O60296 914 aa12.38□□□□□ -0.43
CTNND1-210ENST00000524630 COG3Q96JB2 828 aa12.38□□□□□ -0.43
CTNND1-210ENST00000524630 ROCK1Q13464 1354 aa12.38□□□□□ -0.43
CTNND1-210ENST00000524630 TPD52L1Q16890 204 aaPredicted RBP12.38□□□□□ -0.43
CTNND1-210ENST00000524630 NUTM2FA1L443 756 aa12.37□□□□□ -0.43
CTNND1-210ENST00000524630 FRAT2O75474 233 aaPredicted RBP12.37□□□□□ -0.43
CTNND1-210ENST00000524630 MAP7D2Q96T17 732 aa12.37□□□□□ -0.43
CTNND1-210ENST00000524630 TOMM22Q9NS69 142 aa12.37□□□□□ -0.43
CTNND1-210ENST00000524630 INTS3Q68E01 1043 aaKnown RBP12.37□□□□□ -0.43
CTNND1-210ENST00000524630 PDE4CQ08493 712 aa12.36□□□□□ -0.43
CTNND1-210ENST00000524630 AKNAQ7Z591 1439 aa12.36□□□□□ -0.43
CTNND1-210ENST00000524630 MIA2Q96PC5 1412 aa12.36□□□□□ -0.43
CTNND1-210ENST00000524630 DIAPH1O60610 1272 aaKnown RBP12.36□□□□□ -0.43
CTNND1-210ENST00000524630 NUCB2P80303 420 aa12.36□□□□□ -0.43
CTNND1-210ENST00000524630 MTERF4Q7Z6M4 381 aaKnown RBP12.36□□□□□ -0.43
CTNND1-210ENST00000524630 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.36□□□□□ -0.43
CTNND1-210ENST00000524630 FGD5Q6ZNL6 1462 aa12.36□□□□□ -0.43
CTNND1-210ENST00000524630 PES1O00541 588 aaKnown RBP12.35□□□□□ -0.43
CTNND1-210ENST00000524630 NGEFQ8N5V2 710 aa12.35□□□□□ -0.43
CTNND1-210ENST00000524630 LNPKQ9C0E8 428 aa12.35□□□□□ -0.43
CTNND1-210ENST00000524630 RUFY2Q8WXA3 655 aa12.35□□□□□ -0.43
CTNND1-210ENST00000524630 HOMER1Q86YM7 354 aa12.35□□□□□ -0.43
CTNND1-210ENST00000524630 IFT57Q9NWB7 429 aa12.35□□□□□ -0.43
CTNND1-210ENST00000524630 JPH4Q96JJ6 628 aa12.34□□□□□ -0.43
CTNND1-210ENST00000524630 API5Q9BZZ5 524 aaKnown RBP12.34□□□□□ -0.43
CTNND1-210ENST00000524630 MINK1Q8N4C8 1332 aaPredicted RBP12.34□□□□□ -0.43
CTNND1-210ENST00000524630 RRBP1Q9P2E9 1410 aaKnown RBP12.34□□□□□ -0.43
CTNND1-210ENST00000524630 NCOA2Q15596 1464 aa12.34□□□□□ -0.43
CTNND1-210ENST00000524630 FYCO1Q9BQS8 1478 aa12.34□□□□□ -0.43
CTNND1-210ENST00000524630 TSR1Q2NL82 804 aaKnown RBP12.33□□□□□ -0.44
CTNND1-210ENST00000524630 NCBP3Q53F19 620 aaKnown RBP12.33□□□□□ -0.44
CTNND1-210ENST00000524630 NECTIN2Q92692 538 aa12.33□□□□□ -0.44
CTNND1-210ENST00000524630 CDCA7LQ96GN5 454 aa12.33□□□□□ -0.44
CTNND1-210ENST00000524630 CCDC70Q6NSX1 233 aa12.33□□□□□ -0.44
CTNND1-210ENST00000524630 EID1Q9Y6B2 187 aa12.33□□□□□ -0.44
CTNND1-210ENST00000524630 BICD2Q8TD16 824 aa12.32□□□□□ -0.44
CTNND1-210ENST00000524630 PATL2C9JE40 543 aaKnown RBP12.32□□□□□ -0.44
CTNND1-210ENST00000524630 CCDC173Q0VFZ6 552 aa12.32□□□□□ -0.44
CTNND1-210ENST00000524630 CHMP4CQ96CF2 233 aa12.32□□□□□ -0.44
CTNND1-210ENST00000524630 ADAMTS8Q9UP79 889 aa12.32□□□□□ -0.44
CTNND1-210ENST00000524630 FBXW7Q969H0 707 aa12.32□□□□□ -0.44
CTNND1-210ENST00000524630 ZKSCAN1P17029 563 aaPredicted RBP12.32□□□□□ -0.44
CTNND1-210ENST00000524630 NOM1Q5C9Z4 860 aaKnown RBP12.32□□□□□ -0.44
CTNND1-210ENST00000524630 SASS6Q6UVJ0 657 aa12.32□□□□□ -0.44
CTNND1-210ENST00000524630 WDR97A6NE52 1622 aa12.32□□□□□ -0.44
CTNND1-210ENST00000524630 TPM1P09493 284 aa12.31□□□□□ -0.44
CTNND1-210ENST00000524630 AAMPQ13685 434 aa12.31□□□□□ -0.44
CTNND1-210ENST00000524630 SMC3Q9UQE7 1217 aa12.31□□□□□ -0.44
CTNND1-210ENST00000524630 ERICH3Q5RHP9 1530 aa12.31□□□□□ -0.44
CTNND1-210ENST00000524630 VGFO15240 615 aaPredicted RBP12.31□□□□□ -0.44
CTNND1-210ENST00000524630 EIF2S2P20042 333 aaKnown RBP12.31□□□□□ -0.44
CTNND1-210ENST00000524630 C1orf141Q5JVX7 400 aa12.31□□□□□ -0.44
CTNND1-210ENST00000524630 CASKIN1Q8WXD9 1431 aa12.31□□□□□ -0.44
CTNND1-210ENST00000524630 CDC45O75419 566 aa12.31□□□□□ -0.44
CTNND1-210ENST00000524630 IFIT2P09913 472 aaKnown RBP12.31□□□□□ -0.44
CTNND1-210ENST00000524630 IGF1RP08069 1367 aa12.3□□□□□ -0.44
CTNND1-210ENST00000524630 VPS37CA5D8V6 355 aaPredicted RBP12.3□□□□□ -0.44
CTNND1-210ENST00000524630 ZNF644Q9H582 1327 aaPredicted RBP12.3□□□□□ -0.44
CTNND1-210ENST00000524630 CAVIN1Q6NZI2 390 aaKnown RBP12.3□□□□□ -0.44
CTNND1-210ENST00000524630 ARAP1Q96P48 1450 aa12.3□□□□□ -0.44
CTNND1-210ENST00000524630 RNF214Q8ND24 703 aa12.3□□□□□ -0.44
CTNND1-210ENST00000524630 C9orf78Q9NZ63 289 aaPredicted RBP12.3□□□□□ -0.44
CTNND1-210ENST00000524630 GAPVD1Q14C86 1478 aa12.3□□□□□ -0.44
CTNND1-210ENST00000524630 MSH5O43196 834 aa12.29□□□□□ -0.44
CTNND1-210ENST00000524630 ARGLU1Q9NWB6 273 aaPredicted RBP12.29□□□□□ -0.44
CTNND1-210ENST00000524630 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.29□□□□□ -0.44
CTNND1-210ENST00000524630 RAD54L2Q9Y4B4 1467 aa12.29□□□□□ -0.44
CTNND1-210ENST00000524630 SYNJ1O43426 1573 aa12.29□□□□□ -0.44
CTNND1-210ENST00000524630 FOSBP53539 338 aa12.29□□□□□ -0.44
CTNND1-210ENST00000524630 AKAP17AQ02040 695 aaKnown RBP12.29□□□□□ -0.44
CTNND1-210ENST00000524630 SMG6Q86US8 1419 aaKnown RBP12.28□□□□□ -0.44
CTNND1-210ENST00000524630 TRIM29Q14134 588 aa12.28□□□□□ -0.44
CTNND1-210ENST00000524630 TRHP20396 242 aaPredicted RBP12.28□□□□□ -0.44
CTNND1-210ENST00000524630 MNS1Q8NEH6 495 aa12.28□□□□□ -0.44
CTNND1-210ENST00000524630 TSPY26PQ9H489 355 aa12.28□□□□□ -0.44
CTNND1-210ENST00000524630 MARCH6O60337 910 aa12.28□□□□□ -0.44
CTNND1-210ENST00000524630 PDZRN3Q9UPQ7 1066 aa12.27□□□□□ -0.44
CTNND1-210ENST00000524630 HMOX1P09601 288 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms