RNA–Protein interactions for RNA: ENST00000524463.5

CTSC-203, Transcript of cathepsin C, humanhuman

TSL 1 (best) BASIC

Gene CTSC, Length 6,125 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-203ENST00000524463 DCAF8L1A6NGE4 600 aa12.94□□□□□ -0.34
CTSC-203ENST00000524463 NACADO15069 1562 aa12.93□□□□□ -0.34
CTSC-203ENST00000524463 NEUROD6Q96NK8 337 aa12.93□□□□□ -0.34
CTSC-203ENST00000524463 ST18O60284 1047 aa12.92□□□□□ -0.34
CTSC-203ENST00000524463 IFIT2P09913 472 aaKnown RBP12.92□□□□□ -0.34
CTSC-203ENST00000524463 CCDC43Q96MW1 224 aaKnown RBP12.92□□□□□ -0.34
CTSC-203ENST00000524463 COG6Q9Y2V7 657 aa12.92□□□□□ -0.34
CTSC-203ENST00000524463 RBM42Q9BTD8 480 aaKnown RBP12.92□□□□□ -0.34
CTSC-203ENST00000524463 CHMP4AQ9BY43 222 aa12.92□□□□□ -0.34
CTSC-203ENST00000524463 IKQ13123 557 aaPredicted RBP12.91□□□□□ -0.34
CTSC-203ENST00000524463 GOLGA6L1Q8N7Z2 621 aa12.91□□□□□ -0.34
CTSC-203ENST00000524463 GOLGA6L3A6NEY3 463 aa12.91□□□□□ -0.34
CTSC-203ENST00000524463 CCER2I3L3R5 266 aa12.91□□□□□ -0.34
CTSC-203ENST00000524463 FKBP5Q13451 457 aaPredicted RBP12.91□□□□□ -0.34
CTSC-203ENST00000524463 SMARCA2P51531 1590 aa12.9□□□□□ -0.34
CTSC-203ENST00000524463 EVC2Q86UK5 1308 aa12.9□□□□□ -0.34
CTSC-203ENST00000524463 TRIM29Q14134 588 aa12.9□□□□□ -0.35
CTSC-203ENST00000524463 CSPP1Q1MSJ5 1256 aa12.9□□□□□ -0.35
CTSC-203ENST00000524463 IBSPP21815 317 aaPredicted RBP12.89□□□□□ -0.35
CTSC-203ENST00000524463 ZNF592Q92610 1267 aa12.89□□□□□ -0.35
CTSC-203ENST00000524463 RIC3Q7Z5B4 369 aa12.89□□□□□ -0.35
CTSC-203ENST00000524463 RIPK4P57078 832 aa12.89□□□□□ -0.35
CTSC-203ENST00000524463 BAZ1AQ9NRL2 1556 aaPredicted RBP12.89□□□□□ -0.35
CTSC-203ENST00000524463 TSR1Q2NL82 804 aaKnown RBP12.88□□□□□ -0.35
CTSC-203ENST00000524463 CGNL1Q0VF96 1302 aa12.88□□□□□ -0.35
CTSC-203ENST00000524463 CCDC88BA6NC98 1476 aa12.88□□□□□ -0.35
CTSC-203ENST00000524463 WASHC4Q2M389 1173 aa12.88□□□□□ -0.35
CTSC-203ENST00000524463 CHMP4CQ96CF2 233 aa12.88□□□□□ -0.35
CTSC-203ENST00000524463 RAPGEF4Q8WZA2 1011 aa12.88□□□□□ -0.35
CTSC-203ENST00000524463 CABP2Q9NPB3 220 aa12.88□□□□□ -0.35
CTSC-203ENST00000524463 TSPYL4Q9UJ04 414 aa12.88□□□□□ -0.35
CTSC-203ENST00000524463 OSCARQ8IYS5 282 aa12.87□□□□□ -0.35
CTSC-203ENST00000524463 CPLX1O14810 134 aa12.87□□□□□ -0.35
CTSC-203ENST00000524463 TPM2P07951 284 aa12.87□□□□□ -0.35
CTSC-203ENST00000524463 ESCO1Q5FWF5 840 aa12.87□□□□□ -0.35
CTSC-203ENST00000524463 CCDC144AA2RUR9 1427 aa12.87□□□□□ -0.35
CTSC-203ENST00000524463 CRBNQ96SW2 442 aa12.87□□□□□ -0.35
CTSC-203ENST00000524463 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.87□□□□□ -0.352e-6■■■■■ 149.1
CTSC-203ENST00000524463 VGFO15240 615 aaPredicted RBP12.87□□□□□ -0.35
CTSC-203ENST00000524463 APAF1O14727 1248 aa12.87□□□□□ -0.35
CTSC-203ENST00000524463 G3BP1Q13283 466 aaKnown RBP eCLIP12.86□□□□□ -0.35
CTSC-203ENST00000524463 TMEM132EQ6IEE7 984 aa12.86□□□□□ -0.35
CTSC-203ENST00000524463 DIAPH1O60610 1272 aaKnown RBP12.86□□□□□ -0.35
CTSC-203ENST00000524463 TMEM132AQ24JP5 1023 aa12.86□□□□□ -0.35
CTSC-203ENST00000524463 CCAR1Q8IX12 1150 aaKnown RBP12.85□□□□□ -0.35
CTSC-203ENST00000524463 ERICH2A1L162 156 aa12.85□□□□□ -0.35
CTSC-203ENST00000524463 BECN2A8MW95 431 aa12.85□□□□□ -0.35
CTSC-203ENST00000524463 GOLGA6L19H0YKK7 550 aa12.85□□□□□ -0.35
CTSC-203ENST00000524463 NLRP13Q86W25 1043 aa12.85□□□□□ -0.35
CTSC-203ENST00000524463 GGNBP2Q9H3C7 697 aa12.85□□□□□ -0.35
CTSC-203ENST00000524463 FMN1Q68DA7 1419 aa12.85□□□□□ -0.35
CTSC-203ENST00000524463 EXOC6Q8TAG9 804 aa12.85□□□□□ -0.35
CTSC-203ENST00000524463 KIF3AQ9Y496 699 aa12.85□□□□□ -0.35
CTSC-203ENST00000524463 TNNT3P45378 269 aaPredicted RBP12.84□□□□□ -0.35
CTSC-203ENST00000524463 ATP2B2Q01814 1243 aa12.84□□□□□ -0.35
CTSC-203ENST00000524463 ZKSCAN2Q63HK3 967 aa12.84□□□□□ -0.35
CTSC-203ENST00000524463 PTMSP20962 102 aa12.84□□□□□ -0.35
CTSC-203ENST00000524463 SF3B2Q13435 895 aaKnown RBP12.84□□□□□ -0.35
CTSC-203ENST00000524463 TRDNQ13061 729 aa12.83□□□□□ -0.36
CTSC-203ENST00000524463 NAP1L1P55209 391 aaKnown RBP12.83□□□□□ -0.36
CTSC-203ENST00000524463 VPS8Q8N3P4 1428 aa12.83□□□□□ -0.36
CTSC-203ENST00000524463 DDX58O95786 925 aaKnown RBP12.83□□□□□ -0.36
CTSC-203ENST00000524463 FAM161AQ3B820 660 aa12.83□□□□□ -0.36
CTSC-203ENST00000524463 VPS37CA5D8V6 355 aaPredicted RBP12.82□□□□□ -0.36
CTSC-203ENST00000524463 DDX54Q8TDD1 881 aaKnown RBP12.82□□□□□ -0.36
CTSC-203ENST00000524463 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.82□□□□□ -0.36
CTSC-203ENST00000524463 ZFYVE27Q5T4F4 411 aa12.82□□□□□ -0.36
CTSC-203ENST00000524463 DNAJC2Q99543 621 aaKnown RBP12.82□□□□□ -0.36
CTSC-203ENST00000524463 CCDC18Q5T9S5 1454 aa12.82□□□□□ -0.36
CTSC-203ENST00000524463 NLRP6P59044 892 aa12.81□□□□□ -0.36
CTSC-203ENST00000524463 DDX49Q9Y6V7 483 aaKnown RBP12.81□□□□□ -0.36
CTSC-203ENST00000524463 XPCQ01831 940 aaPredicted RBP12.81□□□□□ -0.36
CTSC-203ENST00000524463 BICD2Q8TD16 824 aa12.81□□□□□ -0.36
CTSC-203ENST00000524463 MYBBP1AQ9BQG0 1328 aaKnown RBP12.81□□□□□ -0.36
CTSC-203ENST00000524463 RRP12Q5JTH9 1297 aaKnown RBP12.81□□□□□ -0.36
CTSC-203ENST00000524463 ABTB2Q8N961 1025 aa12.81□□□□□ -0.36
CTSC-203ENST00000524463 KIF15Q9NS87 1388 aa12.81□□□□□ -0.36
CTSC-203ENST00000524463 PTPRGP23470 1445 aa12.8□□□□□ -0.36
CTSC-203ENST00000524463 ATP2B1P20020 1258 aa12.8□□□□□ -0.36
CTSC-203ENST00000524463 PHF14O94880 888 aa12.79□□□□□ -0.36
CTSC-203ENST00000524463 RBM5P52756 815 aaKnown RBP eCLIP12.79□□□□□ -0.36
CTSC-203ENST00000524463 TPM1P09493 284 aa12.79□□□□□ -0.36
CTSC-203ENST00000524463 PROSER2Q86WR7 435 aaPredicted RBP12.79□□□□□ -0.36
CTSC-203ENST00000524463 SPINK5Q9NQ38 1064 aaPredicted RBP12.79□□□□□ -0.36
CTSC-203ENST00000524463 BICDL1Q6ZP65 573 aa12.79□□□□□ -0.36
CTSC-203ENST00000524463 ZKSCAN1P17029 563 aaPredicted RBP12.79□□□□□ -0.36
CTSC-203ENST00000524463 CPLX2Q6PUV4 134 aaKnown RBP12.79□□□□□ -0.36
CTSC-203ENST00000524463 PAF1Q8N7H5 531 aa12.79□□□□□ -0.36
CTSC-203ENST00000524463 CT47A1Q5JQC4 288 aaPredicted RBP12.79□□□□□ -0.36
CTSC-203ENST00000524463 SKIDA1Q1XH10 827 aa12.78□□□□□ -0.36
CTSC-203ENST00000524463 TTLL5Q6EMB2 1281 aa12.78□□□□□ -0.36
CTSC-203ENST00000524463 MROH2BQ7Z745 1585 aa12.77□□□□□ -0.36
CTSC-203ENST00000524463 LRRFIP1Q32MZ4 808 aaKnown RBP12.77□□□□□ -0.36
CTSC-203ENST00000524463 RUFY2Q8WXA3 655 aa12.77□□□□□ -0.36
CTSC-203ENST00000524463 R3HCC1Q9Y3T6 440 aaKnown RBP12.77□□□□□ -0.37
CTSC-203ENST00000524463 CCDC47Q96A33 483 aaKnown RBP12.77□□□□□ -0.37
CTSC-203ENST00000524463 IPO9Q96P70 1041 aaKnown RBP12.76□□□□□ -0.37
CTSC-203ENST00000524463 LNPKQ9C0E8 428 aa12.76□□□□□ -0.37
CTSC-203ENST00000524463 TIMELESSQ9UNS1 1208 aa12.76□□□□□ -0.37
CTSC-203ENST00000524463 E9PSI1 815 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 172.1 ms