RNA–Protein interactions for RNA: ENST00000520700.1

TRAM1-203, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-203ENST00000520700 TXNDC2Q86VQ3 553 aa25.32■■□□□ 1.64
TRAM1-203ENST00000520700 STAC3Q96MF2 364 aa25.31■■□□□ 1.64
TRAM1-203ENST00000520700 SIN3AQ96ST3 1273 aa25.31■■□□□ 1.64
TRAM1-203ENST00000520700 MYO5BQ9ULV0 1848 aa25.3■■□□□ 1.64
TRAM1-203ENST00000520700 MED14O60244 1454 aa25.29■■□□□ 1.64
TRAM1-203ENST00000520700 SCAF11Q99590 1463 aaKnown RBP25.29■■□□□ 1.64
TRAM1-203ENST00000520700 RGL3Q3MIN7 710 aa25.29■■□□□ 1.64
TRAM1-203ENST00000520700 CCER1Q8TC90 406 aaPredicted RBP25.28■■□□□ 1.64
TRAM1-203ENST00000520700 DMRT2Q9Y5R5 561 aa25.28■■□□□ 1.64
TRAM1-203ENST00000520700 NCKAP5LQ9HCH0 1330 aa25.28■■□□□ 1.64
TRAM1-203ENST00000520700 VGFO15240 615 aaPredicted RBP25.27■■□□□ 1.64
TRAM1-203ENST00000520700 NEXMIFQ5QGS0 1516 aa25.27■■□□□ 1.64
TRAM1-203ENST00000520700 STRCQ7RTU9 1775 aa25.25■■□□□ 1.63
TRAM1-203ENST00000520700 PLEKHG1Q9ULL1 1385 aa25.23■■□□□ 1.63
TRAM1-203ENST00000520700 NEUROD1Q13562 356 aa25.23■■□□□ 1.63
TRAM1-203ENST00000520700 NPHP4O75161 1426 aaPredicted RBP25.21■■□□□ 1.63
TRAM1-203ENST00000520700 PPP1R15AO75807 674 aaPredicted RBP25.21■■□□□ 1.63
TRAM1-203ENST00000520700 TIMELESSQ9UNS1 1208 aa25.21■■□□□ 1.63
TRAM1-203ENST00000520700 POLR1AO95602 1720 aaPredicted RBP25.2■■□□□ 1.62
TRAM1-203ENST00000520700 PPLO60437 1756 aa25.18■■□□□ 1.62
TRAM1-203ENST00000520700 MYOM2P54296 1465 aa25.18■■□□□ 1.62
TRAM1-203ENST00000520700 NUTM2DQ5VT03 806 aaPredicted RBP25.17■■□□□ 1.62
TRAM1-203ENST00000520700 DCAF11Q8TEB1 546 aa25.17■■□□□ 1.62
TRAM1-203ENST00000520700 L3MBTL2Q969R5 705 aa25.17■■□□□ 1.62
TRAM1-203ENST00000520700 IFT172Q9UG01 1749 aa25.17■■□□□ 1.62
TRAM1-203ENST00000520700 NRXN1Q9ULB1 1477 aa25.15■■□□□ 1.62
TRAM1-203ENST00000520700 ADGRF5Q8IZF2 1346 aa25.15■■□□□ 1.62
TRAM1-203ENST00000520700 TBX22Q9Y458 520 aa25.15■■□□□ 1.62
TRAM1-203ENST00000520700 SETBP1Q9Y6X0 1596 aa25.13■■□□□ 1.61
TRAM1-203ENST00000520700 IQGAP1P46940 1657 aa25.12■■□□□ 1.61
TRAM1-203ENST00000520700 ADAMTS13Q76LX8 1427 aa25.12■■□□□ 1.61
TRAM1-203ENST00000520700 TONSLQ96HA7 1378 aa25.11■■□□□ 1.61
TRAM1-203ENST00000520700 PIK3C2GO75747 1445 aa25.1■■□□□ 1.61
TRAM1-203ENST00000520700 KDM2AQ9Y2K7 1162 aa25.09■■□□□ 1.61
TRAM1-203ENST00000520700 BCANQ96GW7 911 aa25.08■■□□□ 1.61
TRAM1-203ENST00000520700 DIP2AQ14689 1571 aa25.07■■□□□ 1.6
TRAM1-203ENST00000520700 SLC26A8Q96RN1 970 aa25.07■■□□□ 1.6
TRAM1-203ENST00000520700 C14orf93Q9H972 538 aaKnown RBP25.07■■□□□ 1.6
TRAM1-203ENST00000520700 PIK3R4Q99570 1358 aa25.06■■□□□ 1.6
TRAM1-203ENST00000520700 NRXN3Q9Y4C0 1643 aa25.05■■□□□ 1.6
TRAM1-203ENST00000520700 PRAG1Q86YV5 1406 aa25.03■■□□□ 1.6
TRAM1-203ENST00000520700 ALKQ9UM73 1620 aa25.02■■□□□ 1.6
TRAM1-203ENST00000520700 KCNA6P17658 529 aa24.99■■□□□ 1.59
TRAM1-203ENST00000520700 CFAP70Q5T0N1 1121 aa24.99■■□□□ 1.59
TRAM1-203ENST00000520700 METP08581 1390 aa24.98■■□□□ 1.59
TRAM1-203ENST00000520700 SENP3Q9H4L4 574 aaPredicted RBP24.96■■□□□ 1.59
TRAM1-203ENST00000520700 LAMC1P11047 1609 aa24.96■■□□□ 1.59
TRAM1-203ENST00000520700 SETD1AO15047 1707 aaKnown RBP24.95■■□□□ 1.59
TRAM1-203ENST00000520700 NBPF8Q3BBV2 869 aa24.94■■□□□ 1.58
TRAM1-203ENST00000520700 ZNF335Q9H4Z2 1342 aaPredicted RBP24.93■■□□□ 1.58
TRAM1-203ENST00000520700 KIAA1210Q9ULL0 1709 aa24.93■■□□□ 1.58
TRAM1-203ENST00000520700 PTPRUQ92729 1446 aa24.92■■□□□ 1.58
TRAM1-203ENST00000520700 AMOTL2Q9Y2J4 779 aa24.91■■□□□ 1.58
TRAM1-203ENST00000520700 CHD2O14647 1828 aaKnown RBP24.91■■□□□ 1.58
TRAM1-203ENST00000520700 NWD1Q149M9 1564 aa24.9■■□□□ 1.58
TRAM1-203ENST00000520700 SIRT1Q96EB6 747 aa24.9■■□□□ 1.58
TRAM1-203ENST00000520700 LRPPRCP42704 1394 aaKnown RBP24.9■■□□□ 1.58
TRAM1-203ENST00000520700 ABCC11Q96J66 1382 aa24.9■■□□□ 1.58
TRAM1-203ENST00000520700 ADGRB1O14514 1584 aa24.89■■□□□ 1.58
TRAM1-203ENST00000520700 TMEM132EQ6IEE7 984 aa24.89■■□□□ 1.58
TRAM1-203ENST00000520700 ASXL1Q8IXJ9 1541 aa24.88■■□□□ 1.57
TRAM1-203ENST00000520700 LTBP4Q8N2S1 1624 aa24.88■■□□□ 1.57
TRAM1-203ENST00000520700 TECPR2O15040 1411 aa24.87■■□□□ 1.57
TRAM1-203ENST00000520700 CPS1P31327 1500 aa24.87■■□□□ 1.57
TRAM1-203ENST00000520700 NBPF1Q3BBV0 1214 aa24.87■■□□□ 1.57
TRAM1-203ENST00000520700 NKTRP30414 1462 aaKnown RBP24.87■■□□□ 1.57
TRAM1-203ENST00000520700 YTHDC2Q9H6S0 1430 aaKnown RBP24.86■■□□□ 1.57
TRAM1-203ENST00000520700 GPRASP1Q5JY77 1395 aa24.86■■□□□ 1.57
TRAM1-203ENST00000520700 XRN1Q8IZH2 1706 aaKnown RBP24.84■■□□□ 1.57
TRAM1-203ENST00000520700 RALGAPBQ86X10 1494 aa24.83■■□□□ 1.57
TRAM1-203ENST00000520700 TRPM1Q7Z4N2 1603 aa24.83■■□□□ 1.57
TRAM1-203ENST00000520700 NCOA3Q9Y6Q9 1424 aa24.83■■□□□ 1.57
TRAM1-203ENST00000520700 STRCP1A6NGW2 1772 aa24.82■■□□□ 1.56
TRAM1-203ENST00000520700 PTCH1Q13635 1447 aa24.82■■□□□ 1.56
TRAM1-203ENST00000520700 ROCK2O75116 1388 aaKnown RBP24.8■■□□□ 1.56
TRAM1-203ENST00000520700 PROSER2Q86WR7 435 aaPredicted RBP24.8■■□□□ 1.56
TRAM1-203ENST00000520700 FAM135BQ49AJ0 1406 aa24.79■■□□□ 1.56
TRAM1-203ENST00000520700 STK26Q9P289 416 aa24.79■■□□□ 1.56
TRAM1-203ENST00000520700 LRRC7Q96NW7 1537 aa24.79■■□□□ 1.56
TRAM1-203ENST00000520700 DLC1Q96QB1 1528 aa24.79■■□□□ 1.56
TRAM1-203ENST00000520700 ROBO2Q9HCK4 1378 aa24.78■■□□□ 1.56
TRAM1-203ENST00000520700 KNDC1Q76NI1 1749 aa24.77■■□□□ 1.56
TRAM1-203ENST00000520700 TRAK1Q9UPV9 953 aa24.75■■□□□ 1.55
TRAM1-203ENST00000520700 TMEM94Q12767 1356 aa24.75■■□□□ 1.55
TRAM1-203ENST00000520700 CARD11Q9BXL7 1154 aa24.74■■□□□ 1.55
TRAM1-203ENST00000520700 IQSEC2Q5JU85 1478 aa24.74■■□□□ 1.55
TRAM1-203ENST00000520700 CERKQ8TCT0 537 aa24.73■■□□□ 1.55
TRAM1-203ENST00000520700 ZEB1P37275 1124 aaPredicted RBP24.72■■□□□ 1.55
TRAM1-203ENST00000520700 WAPLQ7Z5K2 1190 aa24.7■■□□□ 1.54
TRAM1-203ENST00000520700 PRAM1Q96QH2 718 aa24.69■■□□□ 1.54
TRAM1-203ENST00000520700 C19orf44Q9H6X5 657 aa24.68■■□□□ 1.54
TRAM1-203ENST00000520700 POGKQ9P215 609 aa24.67■■□□□ 1.54
TRAM1-203ENST00000520700 PLEKHH1Q9ULM0 1364 aa24.67■■□□□ 1.54
TRAM1-203ENST00000520700 EIF3AQ14152 1382 aaKnown RBP24.66■■□□□ 1.54
TRAM1-203ENST00000520700 RBM33Q96EV2 1170 aaKnown RBP24.65■■□□□ 1.54
TRAM1-203ENST00000520700 ADGRL3Q9HAR2 1447 aa24.65■■□□□ 1.54
TRAM1-203ENST00000520700 XIRP1Q702N8 1843 aaKnown RBP24.64■■□□□ 1.54
TRAM1-203ENST00000520700 ARHGEF28Q8N1W1 1705 aaKnown RBP24.64■■□□□ 1.53
TRAM1-203ENST00000520700 CENPJQ9HC77 1338 aaPredicted RBP24.63■■□□□ 1.53
TRAM1-203ENST00000520700 MSH6P52701 1360 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms